Hello Liam, IIUC, there's a pull request in progress to fix this. Alternatively, you can use the latest CFFI release.
Cheers, Luís On Fri, Dec 4, 2015, 21:19 Liam Healy <l...@healy.washington.dc.us> wrote: > Debian has relocated hdf5 includes and libraries in serial/, which > means that hdf5-cffi does not compile. See this issue: > https://github.com/HDFGroup/hdf5-cffi/issues/61. I am trying to come > up with a CFFI solution. It seems like pkg-config-cflags should do the > job for me, as pkg-config is installed and does the right thing: > > pkg-config --libs hdf5 > -L/usr/lib/x86_64-linux-gnu/hdf5/serial -lhdf5 > pkg-config --cflags hdf5 > -I/usr/include/hdf5/serial > > > However, I put a line > (pkg-config-cflags "hdf5" :optional t) > in hfd5-cffi/hdf5/grovel.lisp and got nothing useful; it is clear it > is running pkg-config but the result never makes it into the cc arg > list. > > (ql:quickload :hdf5-cffi) > To load "hdf5-cffi": > Load 1 ASDF system: > hdf5-cffi > ; Loading "hdf5-cffi" > [package hdf5]; pkg-config hdf5 --cflags > -I/usr/include/hdf5/serial > ; cc -m64 -o > /home/healy/.cache/common-lisp/sbcl-1.2.15-linux-x64/home/healy/languages/lisp/hdf5-cffi/hdf5/grovel__grovel-tmpGHU3ALSV > -I/home/healy/languages/lisp/cffi/ > > /home/healy/.cache/common-lisp/sbcl-1.2.15-linux-x64/home/healy/languages/lisp/hdf5-cffi/hdf5/grovel__grovel.c > ; > /home/healy/.cache/common-lisp/sbcl-1.2.15-linux-x64/home/healy/languages/lisp/hdf5-cffi/hdf5/grovel__grovel > > /home/healy/.cache/common-lisp/sbcl-1.2.15-linux-x64/home/healy/languages/lisp/hdf5-cffi/hdf5/grovel__grovel.grovel-tmp.lisp > ; cc -m64 -o > /home/healy/.cache/common-lisp/sbcl-1.2.15-linux-x64/home/healy/languages/lisp/hdf5-cffi/hdf5/h5-grovel__grovel-tmpAAURSO1 > -I/home/healy/languages/lisp/cffi/ > > /home/healy/.cache/common-lisp/sbcl-1.2.15-linux-x64/home/healy/languages/lisp/hdf5-cffi/hdf5/h5-grovel__grovel.c > > /home/healy/.cache/common-lisp/sbcl-1.2.15-linux-x64/home/healy/languages/lisp/hdf5-cffi/hdf5/h5-grovel__grovel.c:6:18: > fatal error: hdf5.h: No such file or directory > #include <hdf5.h> > ^ > compilation terminated. > > Is this a problem of CFFI or dies the pkg-config-cflags form need to > be somewhere else? > > Liam > >
