Changeset: 3694ea694fc6 for MonetDB
URL: http://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=3694ea694fc6
Added Files:
clients/R/MonetDB.R/man/dbTransaction.Rd
clients/R/MonetDB.R/man/monetdb_queryinfo.Rd
clients/R/MonetDB.R/man/mq.Rd
debian/libmonetdb5-server-bam.install
gdk/gdk_firstn.c
geom/BugTracker/Tests/copy_into_mbr.3492.modules
geom/BugTracker/Tests/copy_into_mbr.3492.sql
geom/BugTracker/Tests/copy_into_mbr.3492.stable.err
geom/BugTracker/Tests/copy_into_mbr.3492.stable.out
monetdb5/tests/gdkTests/Tests/firstn.mal
monetdb5/tests/gdkTests/Tests/firstn.stable.err
monetdb5/tests/gdkTests/Tests/firstn.stable.out
sql/backends/monet5/bam/85_bam.mal
sql/backends/monet5/bam/85_bam.sql
sql/backends/monet5/bam/BAMRecipe.pdf
sql/backends/monet5/bam/Makefile.ag
sql/backends/monet5/bam/Tests/All
sql/backends/monet5/bam/Tests/bam.py
sql/backends/monet5/bam/Tests/bam_export.SQL.py
sql/backends/monet5/bam/Tests/bam_loader_file.SQL.py
sql/backends/monet5/bam/Tests/bam_loader_file.stable.err
sql/backends/monet5/bam/Tests/bam_loader_file.stable.out
sql/backends/monet5/bam/Tests/bam_loader_files.SQL.py
sql/backends/monet5/bam/Tests/bam_loader_files.stable.err
sql/backends/monet5/bam/Tests/bam_loader_files.stable.out
sql/backends/monet5/bam/Tests/bam_loader_repos.SQL.py
sql/backends/monet5/bam/Tests/bam_loader_repos.stable.err
sql/backends/monet5/bam/Tests/bam_loader_repos.stable.out
sql/backends/monet5/bam/Tests/check_files.sql
sql/backends/monet5/bam/Tests/check_files.stable.err
sql/backends/monet5/bam/Tests/check_files.stable.out
sql/backends/monet5/bam/Tests/check_files_exact.sql
sql/backends/monet5/bam/Tests/check_files_exact.stable.err
sql/backends/monet5/bam/Tests/check_files_exact.stable.out
sql/backends/monet5/bam/Tests/drop_last_files.SQL.py
sql/backends/monet5/bam/Tests/drop_last_files.stable.err
sql/backends/monet5/bam/Tests/drop_last_files.stable.out
sql/backends/monet5/bam/Tests/files/file1.bam
sql/backends/monet5/bam/Tests/files/file2.sam
sql/backends/monet5/bam/Tests/files/queryname/file1.bam
sql/backends/monet5/bam/Tests/files/queryname/file2.sam
sql/backends/monet5/bam/Tests/query1.1.sql
sql/backends/monet5/bam/Tests/query1.1.stable.err
sql/backends/monet5/bam/Tests/query1.1.stable.out
sql/backends/monet5/bam/Tests/query1.2.sql
sql/backends/monet5/bam/Tests/query1.2.stable.err
sql/backends/monet5/bam/Tests/query1.2.stable.out
sql/backends/monet5/bam/Tests/query1.3.sql
sql/backends/monet5/bam/Tests/query1.3.stable.err
sql/backends/monet5/bam/Tests/query1.3.stable.out
sql/backends/monet5/bam/Tests/query1.4.sql
sql/backends/monet5/bam/Tests/query1.4.stable.err
sql/backends/monet5/bam/Tests/query1.4.stable.out
sql/backends/monet5/bam/Tests/query1.5.sql
sql/backends/monet5/bam/Tests/query1.5.stable.err
sql/backends/monet5/bam/Tests/query1.5.stable.out
sql/backends/monet5/bam/Tests/query1.6.sql
sql/backends/monet5/bam/Tests/query2.1.sql
sql/backends/monet5/bam/Tests/query2.1.stable.err
sql/backends/monet5/bam/Tests/query2.1.stable.out
sql/backends/monet5/bam/Tests/query2.10.sql
sql/backends/monet5/bam/Tests/query2.10.stable.err
sql/backends/monet5/bam/Tests/query2.10.stable.out
sql/backends/monet5/bam/Tests/query2.11.sql
sql/backends/monet5/bam/Tests/query2.11.stable.err
sql/backends/monet5/bam/Tests/query2.11.stable.out
sql/backends/monet5/bam/Tests/query2.12.sql
sql/backends/monet5/bam/Tests/query2.12.stable.err
sql/backends/monet5/bam/Tests/query2.12.stable.out
sql/backends/monet5/bam/Tests/query2.12.stable.out.int128
sql/backends/monet5/bam/Tests/query2.2.sql
sql/backends/monet5/bam/Tests/query2.2.stable.err
sql/backends/monet5/bam/Tests/query2.2.stable.out
sql/backends/monet5/bam/Tests/query2.2.stable.out.int128
sql/backends/monet5/bam/Tests/query2.3.sql
sql/backends/monet5/bam/Tests/query2.3.stable.err
sql/backends/monet5/bam/Tests/query2.3.stable.out
sql/backends/monet5/bam/Tests/query2.4.sql
sql/backends/monet5/bam/Tests/query2.4.stable.err
sql/backends/monet5/bam/Tests/query2.4.stable.out
sql/backends/monet5/bam/Tests/query2.5.sql
sql/backends/monet5/bam/Tests/query2.5.stable.err
sql/backends/monet5/bam/Tests/query2.5.stable.out
sql/backends/monet5/bam/Tests/query2.5.stable.out.int128
sql/backends/monet5/bam/Tests/query2.6.sql
sql/backends/monet5/bam/Tests/query2.6.stable.err
sql/backends/monet5/bam/Tests/query2.6.stable.out
sql/backends/monet5/bam/Tests/query2.7.sql
sql/backends/monet5/bam/Tests/query2.7.stable.err
sql/backends/monet5/bam/Tests/query2.7.stable.out
sql/backends/monet5/bam/Tests/query2.8.sql
sql/backends/monet5/bam/Tests/query2.8.stable.err
sql/backends/monet5/bam/Tests/query2.8.stable.out
sql/backends/monet5/bam/Tests/query2.9.sql
sql/backends/monet5/bam/Tests/query2.9.stable.err
sql/backends/monet5/bam/Tests/query2.9.stable.out
sql/backends/monet5/bam/Tests/sam_export.SQL.py
sql/backends/monet5/bam/Tests/sam_export.stable.err
sql/backends/monet5/bam/Tests/sam_export.stable.out
sql/backends/monet5/bam/Tests/sql/bam_export.sql
sql/backends/monet5/bam/Tests/sql/bam_loader_file.sql
sql/backends/monet5/bam/Tests/sql/bam_loader_files.sql
sql/backends/monet5/bam/Tests/sql/bam_loader_repos.sql
sql/backends/monet5/bam/Tests/sql/drop_last_files.sql
sql/backends/monet5/bam/Tests/sql/sam_export.sql
sql/backends/monet5/bam/Tests/verify_load.sql
sql/backends/monet5/bam/Tests/verify_load.stable.err
sql/backends/monet5/bam/Tests/verify_load.stable.out
sql/backends/monet5/bam/bam.mal
sql/backends/monet5/bam/bam_db_interface.c
sql/backends/monet5/bam/bam_db_interface.h
sql/backends/monet5/bam/bam_export.c
sql/backends/monet5/bam/bam_export.h
sql/backends/monet5/bam/bam_globals.c
sql/backends/monet5/bam/bam_globals.h
sql/backends/monet5/bam/bam_lib.c
sql/backends/monet5/bam/bam_lib.h
sql/backends/monet5/bam/bam_loader.c
sql/backends/monet5/bam/bam_loader.h
sql/backends/monet5/bam/bam_wrapper.c
sql/backends/monet5/bam/bam_wrapper.h
sql/backends/monet5/bam/mykstring.h
sql/jdbc/tests/Tests/Test_Dobjects_bam.SQL.sh
sql/jdbc/tests/Tests/Test_Dobjects_bam.stable.err
sql/jdbc/tests/Tests/Test_Dobjects_bam.stable.out
sql/test/BugTracker-2012/Tests/table_functions_fail_after_restart-0.Bug-3063_bam.sql.src
sql/test/BugTracker-2012/Tests/table_functions_fail_after_restart-0.Bug-3063_bam.stable.err
sql/test/BugTracker-2012/Tests/table_functions_fail_after_restart-0.Bug-3063_bam.stable.out
sql/test/BugTracker-2012/Tests/table_functions_fail_after_restart-1.Bug-3063_bam.sql.src
sql/test/BugTracker-2012/Tests/table_functions_fail_after_restart-1.Bug-3063_bam.stable.err
sql/test/BugTracker-2012/Tests/table_functions_fail_after_restart-1.Bug-3063_bam.stable.out
sql/test/BugTracker-2014/Tests/oid-table-assert.Bug-3514.sql
sql/test/BugTracker-2014/Tests/oid-table-assert.Bug-3514.stable.err
sql/test/BugTracker-2014/Tests/oid-table-assert.Bug-3514.stable.out
sql/test/BugTracker-2014/Tests/round-properties.Bug-3515.sql
sql/test/BugTracker-2014/Tests/round-properties.Bug-3515.stable.err
sql/test/BugTracker-2014/Tests/round-properties.Bug-3515.stable.out
sql/test/BugTracker-2014/Tests/stringfloatshtcompare.Bug-3512.sql
sql/test/BugTracker-2014/Tests/stringfloatshtcompare.Bug-3512.stable.err
sql/test/BugTracker-2014/Tests/stringfloatshtcompare.Bug-3512.stable.out
sql/test/BugTracker-2014/Tests/union_with_subqueries.Bug-3518.sql
sql/test/BugTracker-2014/Tests/union_with_subqueries.Bug-3518.stable.err
sql/test/BugTracker-2014/Tests/union_with_subqueries.Bug-3518.stable.out
sql/test/BugTracker-2014/Tests/union_with_subqueries.Bug-3518.stable.out.int128
sql/test/BugTracker-2014/Tests/uppercaseboolean.Bug-3519.sql
sql/test/BugTracker-2014/Tests/uppercaseboolean.Bug-3519.stable.err
sql/test/BugTracker-2014/Tests/uppercaseboolean.Bug-3519.stable.out
sql/test/BugTracker-2014/Tests/varchar_conversion_crash.Bug-3506.sql
sql/test/BugTracker-2014/Tests/varchar_conversion_crash.Bug-3506.stable.err
sql/test/BugTracker-2014/Tests/varchar_conversion_crash.Bug-3506.stable.out
sql/test/Dependencies/Tests/Dependencies_bam.SQL.py.src
sql/test/Dependencies/Tests/Dependencies_bam.stable.err
sql/test/Dependencies/Tests/Dependencies_bam.stable.out
sql/test/Dependencies/Tests/Dependencies_bam.stable.out.int128
sql/test/Tests/keys_bam.sql.src
sql/test/Tests/keys_bam.stable.err
sql/test/Tests/keys_bam.stable.out
Removed Files:
monetdb5/mal/Tests/tst267.mal
monetdb5/mal/Tests/tst267.stable.err
monetdb5/mal/Tests/tst267.stable.out
monetdb5/modules/kernel/array.c
monetdb5/modules/kernel/array.h
monetdb5/modules/kernel/array.mal
monetdb5/modules/mal/pqueue.c
monetdb5/modules/mal/pqueue.h
monetdb5/modules/mal/pqueue.mal
monetdb5/optimizer/Tests/AEexample.mal
monetdb5/optimizer/Tests/AEexample.stable.err
monetdb5/optimizer/Tests/AEexample.stable.out
monetdb5/optimizer/Tests/GCexample.mal
monetdb5/optimizer/Tests/GCexample.stable.err
monetdb5/optimizer/Tests/GCexample.stable.out
monetdb5/optimizer/Tests/tst4800.mal
monetdb5/optimizer/Tests/tst4800.stable.err
monetdb5/optimizer/Tests/tst4800.stable.out
monetdb5/optimizer/Tests/tst4800.stable.out.int128
monetdb5/optimizer/Tests/tst4801.mal
monetdb5/optimizer/Tests/tst4801.stable.err
monetdb5/optimizer/Tests/tst4801.stable.out
monetdb5/optimizer/Tests/tst4810.mal
monetdb5/optimizer/Tests/tst4810.stable.err
monetdb5/optimizer/Tests/tst4810.stable.out
monetdb5/optimizer/Tests/tst4900.mal
monetdb5/optimizer/Tests/tst4900.stable.err
monetdb5/optimizer/Tests/tst4900.stable.out
sql/test/Skyserver/Skyserver_dropMath.sql
sql/test/Skyserver/Skyserver_dropMs_functions.sql
Modified Files:
.hgtags
MonetDB.spec
NT/installer32/MonetDB-ODBC-Installer.vdproj
NT/installer32/MonetDB5-Geom-Module.vdproj
NT/installer32/MonetDB5-SQL-Installer.vdproj
NT/installer32/cv64-32.sh
NT/installer64/MonetDB-ODBC-Installer.vdproj
NT/installer64/MonetDB5-Geom-Module.vdproj
NT/installer64/MonetDB5-SQL-Installer.vdproj
NT/installer64/cv32-64.sh
NT/monetdb_config.h.in
NT/rules.msc
buildtools/ChangeLog-Archive
buildtools/ChangeLog.Jan2014
buildtools/autogen/autogen/am.py
buildtools/conf/Maddlog
buildtools/conf/Makefile.ag
buildtools/conf/banner.bmp
buildtools/conf/fixlicense.py
buildtools/conf/license.rtf
buildtools/conf/monetdb.ico
buildtools/conf/rules.mk
buildtools/conf/website.html
clients/R/MonetDB.R/DESCRIPTION
clients/R/MonetDB.R/NEWS
clients/R/MonetDB.R/R/control.R
clients/R/MonetDB.R/R/monetdb.R
clients/R/MonetDB.R/src/mapi.c
clients/R/db.tests/monetdb.test.R
clients/Tests/All
clients/Tests/MAL-signatures.stable.out
clients/Tests/MAL-signatures.stable.out.int128
clients/Tests/MAL-signatures_gsl.stable.out
clients/Tests/MAL-signatures_gsl.stable.out.int128
clients/Tests/MAL-signatures_nocfitsio.stable.out
clients/Tests/MAL-signatures_nocfitsio.stable.out.int128
clients/Tests/MAL-signatures_sphinxclient.stable.out
clients/Tests/MAL-signatures_sphinxclient.stable.out.int128
clients/Tests/SQL-dump.stable.out
clients/Tests/SQL-dump.stable.out.32bit
clients/Tests/SQL-dump.stable.out.64bit.oid32
clients/Tests/SQL-dump.stable.out.64bit.oid32.int128
clients/Tests/SQL-dump.stable.out.int128
clients/Tests/SQL-dump_gsl.stable.out
clients/Tests/SQL-dump_gsl.stable.out.int128
clients/Tests/SQL-dump_gsl.stable.out.oid32
clients/Tests/SQL-dump_gsl.stable.out.oid32.int128
clients/Tests/SQL-dump_nogeom.stable.out
clients/Tests/SQL-dump_nogeom.stable.out.int128
clients/Tests/exports.stable.out
clients/examples/php/sqlsample.php
clients/mapiclient/dump.c
clients/mapiclient/mclient.c
clients/mapiclient/stethoscope.c
clients/mapiclient/tomograph.c
clients/mapilib/mapi.rc
clients/odbc/driver/ODBCConvert.c
clients/odbc/driver/ODBCUtil.h
clients/odbc/driver/driver.rc
clients/odbc/setup/Makefile.ag
clients/odbc/winsetup/Makefile.ag
clients/odbc/winsetup/setup.rc
clients/python2/monetdb/sql/monetize.py
clients/python2/setup.py
clients/python2/test/test_monetize.py
clients/python3/monetdb/sql/monetize.py
clients/python3/setup.py
clients/python3/test/test_monetize.py
common/stream/stream.c
configure.ag
debian/changelog
debian/control
debian/monetdb5-server.install
debian/rules
gdk/ChangeLog
gdk/Makefile.ag
gdk/gdk.h
gdk/gdk_aggr.c
gdk/gdk_align.c
gdk/gdk_atoms.c
gdk/gdk_bat.c
gdk/gdk_batop.c
gdk/gdk_bbp.c
gdk/gdk_bbp.h
gdk/gdk_calc.c
gdk/gdk_calc_compare.h
gdk/gdk_cross.c
gdk/gdk_delta.c
gdk/gdk_group.c
gdk/gdk_heap.c
gdk/gdk_imprints.c
gdk/gdk_join.c
gdk/gdk_join_legacy.c
gdk/gdk_logger.c
gdk/gdk_logger.h
gdk/gdk_posix.c
gdk/gdk_private.h
gdk/gdk_sample.c
gdk/gdk_search.c
gdk/gdk_select.c
gdk/gdk_setop.c
gdk/gdk_storage.c
gdk/gdk_tm.c
gdk/gdk_unique.c
gdk/gdk_utils.c
gdk/libbat.rc
geom/BugTracker/Tests/All
geom/monetdb5/geom.c
java/src/nl/cwi/monetdb/jdbc/MonetDatabaseMetaData.java
libversions
monetdb5/extras/rdf/rdf_shredder.c
monetdb5/extras/rdf/rdfalgebra.c
monetdb5/extras/sphinx/sphinx.c
monetdb5/mal/Tests/All
monetdb5/mal/Tests/tst1012.mal
monetdb5/mal/Tests/tst1012.stable.out
monetdb5/mal/Tests/tst913.stable.out
monetdb5/mal/mal.h
monetdb5/mal/mal_authorize.c
monetdb5/mal/mal_builder.c
monetdb5/mal/mal_dataflow.c
monetdb5/mal/mal_function.c
monetdb5/mal/mal_import.c
monetdb5/mal/mal_instruction.c
monetdb5/mal/mal_interpreter.c
monetdb5/mal/mal_linker.c
monetdb5/mal/mal_listing.c
monetdb5/mal/mal_module.c
monetdb5/mal/mal_parser.c
monetdb5/mal/mal_profiler.c
monetdb5/mal/mal_profiler.h
monetdb5/mal/mal_type.h
monetdb5/modules/atoms/batxml.c
monetdb5/modules/atoms/json.c
monetdb5/modules/atoms/json.mal
monetdb5/modules/atoms/mtime.c
monetdb5/modules/atoms/str.c
monetdb5/modules/kernel/Makefile.ag
monetdb5/modules/kernel/algebra.c
monetdb5/modules/kernel/algebra.h
monetdb5/modules/kernel/algebra.mal
monetdb5/modules/kernel/bat5.c
monetdb5/modules/kernel/bat5.h
monetdb5/modules/kernel/batcolor.c
monetdb5/modules/kernel/batmmath.c
monetdb5/modules/kernel/batstr.c
monetdb5/modules/kernel/counters.c
monetdb5/modules/kernel/microbenchmark.c
monetdb5/modules/kernel/status.c
monetdb5/modules/mal/Makefile.ag
monetdb5/modules/mal/Tests/inspect05.stable.out
monetdb5/modules/mal/Tests/inspect05.stable.out.int128
monetdb5/modules/mal/Tests/pqueue.mal
monetdb5/modules/mal/Tests/pqueue.stable.out
monetdb5/modules/mal/Tests/pqueue2.mal
monetdb5/modules/mal/Tests/pqueue2.stable.out
monetdb5/modules/mal/Tests/pqueue3.mal
monetdb5/modules/mal/Tests/pqueue3.stable.out
monetdb5/modules/mal/batExtensions.c
monetdb5/modules/mal/batExtensions.h
monetdb5/modules/mal/batExtensions.mal
monetdb5/modules/mal/bbp.c
monetdb5/modules/mal/clients.c
monetdb5/modules/mal/cluster.c
monetdb5/modules/mal/inspect.c
monetdb5/modules/mal/mal_init.mal
monetdb5/modules/mal/mal_mapi.c
monetdb5/modules/mal/manifold.c
monetdb5/modules/mal/mat.c
monetdb5/modules/mal/mdb.c
monetdb5/modules/mal/mkey.c
monetdb5/modules/mal/pcre.c
monetdb5/modules/mal/profiler.c
monetdb5/modules/mal/querylog.c
monetdb5/modules/mal/remote.c
monetdb5/modules/mal/sample.c
monetdb5/modules/mal/sample.h
monetdb5/modules/mal/sysmon.c
monetdb5/modules/mal/tablet.c
monetdb5/modules/mal/tokenizer.c
monetdb5/modules/mal/txtsim.c
monetdb5/modules/mal/zorder.c
monetdb5/optimizer/opt_centipede.c
monetdb5/optimizer/opt_mergetable.c
monetdb5/optimizer/opt_pipes.c
monetdb5/optimizer/opt_prelude.c
monetdb5/optimizer/opt_prelude.h
monetdb5/optimizer/opt_pushselect.c
monetdb5/optimizer/opt_statistics.c
monetdb5/optimizer/opt_support.c
monetdb5/optimizer/opt_wrapper.c
monetdb5/scheduler/run_octopus.c
monetdb5/tests/gdkTests/Tests/All
monetdb5/tests/gdkTests/Tests/TMsubcommit.mal
monetdb5/tests/gdkTests/Tests/TMsubcommit.stable.out
monetdb5/tests/gdkTests/Tests/bat_insert.mal
monetdb5/tests/gdkTests/Tests/bat_insert.stable.out
monetdb5/tests/gdkTests/Tests/reload.mal
monetdb5/tests/gdkTests/Tests/reload.stable.out
monetdb5/tests/gdkTests/Tests/str_heap.mal
monetdb5/tests/gdkTests/Tests/str_heap.stable.out
monetdb5/tools/Tests/mserver5--help.stable.err
monetdb5/tools/libmonetdb5.rc
sql/backends/monet5/LSST/lsst.c
sql/backends/monet5/Makefile.ag
sql/backends/monet5/UDF/udf.c
sql/backends/monet5/datacell/basket.c
sql/backends/monet5/datacell/dcoperator.c
sql/backends/monet5/datacell/emitter.c
sql/backends/monet5/datacell/petrinet.c
sql/backends/monet5/datacell/receptor.c
sql/backends/monet5/gsl/gsl.c
sql/backends/monet5/rel_bin.c
sql/backends/monet5/sql.c
sql/backends/monet5/sql_bat2time.c
sql/backends/monet5/sql_cast.c
sql/backends/monet5/sql_cast_impl_down_from_flt.h
sql/backends/monet5/sql_cast_impl_down_from_int.h
sql/backends/monet5/sql_cast_impl_up_to_flt.h
sql/backends/monet5/sql_cast_impl_up_to_int.h
sql/backends/monet5/sql_fround.c
sql/backends/monet5/sql_fround_impl.h
sql/backends/monet5/sql_gencode.c
sql/backends/monet5/sql_optimizer.c
sql/backends/monet5/sql_round.c
sql/backends/monet5/sql_round_impl.h
sql/backends/monet5/sql_scenario.c
sql/backends/monet5/sql_statement.c
sql/backends/monet5/sql_statistics.c
sql/backends/monet5/vaults/fits.c
sql/backends/monet5/vaults/mseed.c
sql/benchmarks/ssbm/Tests/01-13.reqtests
sql/benchmarks/ssbm/Tests/01-explain.reqtests
sql/benchmarks/ssbm/Tests/01-plan.reqtests
sql/benchmarks/ssbm/Tests/01.reqtests
sql/benchmarks/ssbm/Tests/02-explain.reqtests
sql/benchmarks/ssbm/Tests/02-plan.reqtests
sql/benchmarks/ssbm/Tests/02.reqtests
sql/benchmarks/ssbm/Tests/03-explain.reqtests
sql/benchmarks/ssbm/Tests/03-plan.reqtests
sql/benchmarks/ssbm/Tests/03.reqtests
sql/benchmarks/ssbm/Tests/04-explain.reqtests
sql/benchmarks/ssbm/Tests/04-plan.reqtests
sql/benchmarks/ssbm/Tests/04.reqtests
sql/benchmarks/ssbm/Tests/05-explain.reqtests
sql/benchmarks/ssbm/Tests/05-plan.reqtests
sql/benchmarks/ssbm/Tests/05.reqtests
sql/benchmarks/ssbm/Tests/06-explain.reqtests
sql/benchmarks/ssbm/Tests/06-plan.reqtests
sql/benchmarks/ssbm/Tests/06.reqtests
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sql/storage/bat/bat_logger.c
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testing/Mtest.py.in
testing/quicktest
tools/mserver/mserver5.1.in
tools/mserver/mserver5.c
vertoo.data
Branch: int128
Log Message:
Merged with default branch.
diffs (truncated from 129170 to 300 lines):
diff --git a/.hgtags b/.hgtags
--- a/.hgtags
+++ b/.hgtags
@@ -570,3 +570,8 @@ c3051f066a9eea814487dfb0b7cf7070ae16cd21
13e1b24f442791f5ab790fa77453d3bd4e88a9c8 Jan2014_SP2_release
389f5f0d4c43ab689e31c28e01b43c8b7ba8de9c Jan2014_SP2_release
112de93a021365420a115aaf2bb9239dff4fc81a int128_default_1d2a758d4fda
+dc158ade928d0305f3f0e7ef9613dd81329f613d Jan2014_19
+0218c4ec31068bd1b9be7d2bb1ccad31e17e8d5f Jan2014_SP3_release
+6830d0b9c31fe23954c75014a581f145c7a551ff Jan2014_21
+0218c4ec31068bd1b9be7d2bb1ccad31e17e8d5f Jan2014_SP3_release
+6c7d5f562fcb044b745c871344c25b1c6bab7cf4 Jan2014_SP3_release
diff --git a/MonetDB.spec b/MonetDB.spec
--- a/MonetDB.spec
+++ b/MonetDB.spec
@@ -36,6 +36,10 @@
%define with_geos 1
%endif
+%if %{?_with_samtools:1}%{!?_with_samtools:0}
+%define with_samtools 1
+%endif
+
Name: %{name}
Version: %{version}
Release: %{release}
@@ -45,7 +49,7 @@ Vendor: MonetDB BV <[email protected]>
Group: Applications/Databases
License: MPL - http://www.monetdb.org/Legal/MonetDBLicense
URL: http://www.monetdb.org/
-Source:
http://dev.monetdb.org/downloads/sources/Jan2014-SP2/%{name}-%{version}.tar.bz2
+Source:
http://dev.monetdb.org/downloads/sources/Jan2014-SP3/%{name}-%{version}.tar.bz2
BuildRequires: bison
BuildRequires: bzip2-devel
@@ -78,6 +82,9 @@ BuildRequires: rubygems-devel
%endif
BuildRequires: unixODBC-devel
BuildRequires: zlib-devel
+%if %{?with_samtools:1}%{!?with_samtools:0}
+BuildRequires: samtools-devel
+%endif
# need to define python_sitelib on RHEL 5 and older
# no need to define python3_sitelib: it's defined by python3-devel
@@ -449,6 +456,29 @@ numerical analysis (gsl).
%{_libdir}/monetdb5/gsl.mal
%{_libdir}/monetdb5/lib_gsl.so
+%if %{?_with_samtools:1}%{!?_with_samtools:0}
+%package bam-MonetDB5
+Summary: MonetDB5 SQL interface to the bam library
+Group: Applications/Databases
+Requires: MonetDB5-server = %{version}-%{release}
+
+%description bam-MonetDB5
+MonetDB is a database management system that is developed from a
+main-memory perspective with use of a fully decomposed storage model,
+automatic index management, extensibility of data types and search
+accelerators. It also has an SQL frontend.
+
+This package contains the interface to load and query BAM (binary
+version of Sequence Alignment/Map) data.
+
+%files bam-MonetDB5
+%defattr(-,root,root)
+%{_libdir}/monetdb5/autoload/*_bam.mal
+%{_libdir}/monetdb5/createdb/*_bam.sql
+%{_libdir}/monetdb5/bam.mal
+%{_libdir}/monetdb5/lib_bam.so
+%endif
+
%package -n MonetDB5-server
Summary: MonetDB - Monet Database Management System
Group: Applications/Databases
@@ -501,16 +531,22 @@ fi
# %exclude %{_libdir}/monetdb5/rdf.mal
%exclude %{_libdir}/monetdb5/sql.mal
%{_libdir}/monetdb5/*.mal
-%{_libdir}/monetdb5/autoload/0*.mal
-# %{_libdir}/monetdb5/autoload/*_fits.mal
-%{_libdir}/monetdb5/autoload/*_lsst.mal
-%{_libdir}/monetdb5/autoload/*_opt_sql_append.mal
-%{_libdir}/monetdb5/autoload/*_udf*.mal
-%{_libdir}/monetdb5/autoload/*_vault.mal
+%if %{?with_geos:1}%{!?with_geos:0}
+%exclude %{_libdir}/monetdb5/autoload/*_geom.mal
+%endif
+%exclude %{_libdir}/monetdb5/autoload/*_gsl.mal
+# %exclude %{_libdir}/monetdb5/autoload/*_rdf.mal
+%exclude %{_libdir}/monetdb5/autoload/*_sql.mal
+%{_libdir}/monetdb5/autoload/*.mal
%if %{?with_geos:1}%{!?with_geos:0}
%exclude %{_libdir}/monetdb5/lib_geom.so
%endif
%exclude %{_libdir}/monetdb5/lib_gsl.so
+%if %{?_with_samtools:1}%{!?_with_samtools:0}
+%exclude %{_libdir}/monetdb5/bam.mal
+%exclude %{_libdir}/monetdb5/autoload/*_bam.mal
+%exclude %{_libdir}/monetdb5/lib_bam.so
+%endif
# %exclude %{_libdir}/monetdb5/lib_rdf.so
%exclude %{_libdir}/monetdb5/lib_sql.so
%{_libdir}/monetdb5/*.so
@@ -561,9 +597,9 @@ used from the MAL level.
Summary: MonetDB5 SQL server modules
Group: Applications/Databases
Requires: MonetDB5-server = %{version}-%{release}
-%if %{?rhel:0}%{!?rhel:1}
-# for systemd-tmpfiles
-Requires: systemd-units
+%if %{?rhel:0}%{!?rhel:1} || 0%{?rhel} >= 7
+# RHEL >= 7, and all current Fedora
+Requires: %{_bindir}/systemd-tmpfiles
%endif
Obsoletes: MonetDB-SQL-devel
Obsoletes: %{name}-SQL
@@ -577,7 +613,7 @@ accelerators. It also has an SQL fronte
This package contains the SQL frontend for MonetDB. If you want to
use SQL with MonetDB, you will need to install this package.
-%if %{?rhel:0}%{!?rhel:1}
+%if %{?rhel:0}%{!?rhel:1} || 0%{?rhel} >= 7
%post SQL-server5
systemd-tmpfiles --create %{_sysconfdir}/tmpfiles.d/monetdbd.conf
%endif
@@ -587,11 +623,11 @@ systemd-tmpfiles --create %{_sysconfdir}
%{_bindir}/monetdb
%{_bindir}/monetdbd
%dir %attr(775,monetdb,monetdb) %{_localstatedir}/log/monetdb
-%if %{?rhel:0}%{!?rhel:1}
-# Fedora 15 and newer
+%if %{?rhel:0}%{!?rhel:1} || 0%{?rhel} >= 7
+# RHEL >= 7, and all current Fedora
%{_sysconfdir}/tmpfiles.d/monetdbd.conf
%else
-# RedHat Enterprise Linux
+# RedHat Enterprise Linux < 7
%dir %attr(775,monetdb,monetdb) %{_localstatedir}/run/monetdb
%exclude %{_sysconfdir}/tmpfiles.d/monetdbd.conf
%endif
@@ -604,6 +640,9 @@ systemd-tmpfiles --create %{_sysconfdir}
%exclude %{_libdir}/monetdb5/createdb/*_geom.sql
%endif
%exclude %{_libdir}/monetdb5/createdb/*_gsl.sql
+%if %{?_with_samtools:1}%{!?_with_samtools:0}
+%exclude %{_libdir}/monetdb5/createdb/*_bam.sql
+%endif
# %exclude %{_libdir}/monetdb5/createdb/*_rdf.sql
%{_libdir}/monetdb5/createdb/*
%{_libdir}/monetdb5/sql*.mal
@@ -761,6 +800,7 @@ developer, but if you do want to test, t
--with-readline=yes \
--with-rubygem=%{?rhel:no}%{!?rhel:yes} \
--with-rubygem-dir=%{?rhel:no}%{!?rhel:"%{gem_dir}"} \
+ --with-samtools=%{?with_samtools:yes}%{!?with_samtools:no} \
--with-sphinxclient=no \
--with-unixodbc=yes \
--with-valgrind=no \
@@ -801,6 +841,24 @@ mv $RPM_BUILD_ROOT%{_datadir}/doc/MonetD
rm -fr $RPM_BUILD_ROOT
%changelog
+* Fri Jul 25 2014 Sjoerd Mullender <[email protected]> - 11.17.21-20140725
+- Rebuilt.
+- BZ#3519: Uppercase TRUE/FALSE strings cannot be converted to boolean
+ values
+
+* Tue Jul 22 2014 Sjoerd Mullender <[email protected]> - 11.17.19-20140722
+- Rebuilt.
+- BZ#3487: dead link to "Professional services"
+- BZ#3500: MonetDB driver wants an empty string for SQLTables and
+ SQLColumns API calls, where other drivers expect NULL
+- BZ#3514: mserver5 crash due (assertion failure in gdk_select.c)
+- BZ#3515: mserver5 crash due (assertion failure in gdk_bat.c)
+
+* Tue Jun 3 2014 Sjoerd Mullender <[email protected]> - 11.17.19-20140722
+- buildtools: Fix configure to continue without Python if the python binary is
+ too old. This instead of always aborting configure if python happens
+ to be too old.
+
* Wed May 14 2014 Sjoerd Mullender <[email protected]> - 11.17.17-20140514
- Rebuilt.
- BZ#3482: Crossproduct error
diff --git a/NT/installer32/MonetDB5-Geom-Module.vdproj
b/NT/installer32/MonetDB5-Geom-Module.vdproj
--- a/NT/installer32/MonetDB5-Geom-Module.vdproj
+++ b/NT/installer32/MonetDB5-Geom-Module.vdproj
@@ -94,11 +94,6 @@
"ComponentsUrl" = "8:"
"Items"
{
-
"{EDC2488A-8267-493A-A98E-7D9C3B36CDF3}:Microsoft.Windows.Installer.2.0"
- {
- "Name" = "8:Windows Installer 2.0"
- "ProductCode" = "8:Microsoft.Windows.Installer.2.0"
- }
}
}
}
@@ -428,6 +423,7 @@
"ProductCode" = "8:{66BABD32-D69D-4A89-A7F3-2655D4CD0641}"
"PackageCode" = "8:{D9B2D386-1461-43BC-9A63-93F1BA0D7921}"
"UpgradeCode" = "8:{92C89C36-0E86-45E1-B3D8-0D6C91108F30}"
+ "AspNetVersion" = "8:4.0.30319.0"
"RestartWWWService" = "11:FALSE"
"RemovePreviousVersions" = "11:TRUE"
"DetectNewerInstalledVersion" = "11:TRUE"
diff --git a/NT/installer32/MonetDB5-SQL-Installer.vdproj
b/NT/installer32/MonetDB5-SQL-Installer.vdproj
--- a/NT/installer32/MonetDB5-SQL-Installer.vdproj
+++ b/NT/installer32/MonetDB5-SQL-Installer.vdproj
@@ -927,12 +927,6 @@
}
"Entry"
{
- "MsmKey" = "8:_F4DDA57B13344198B902859413BF2B9D"
- "OwnerKey" = "8:_UNDEFINED"
- "MsmSig" = "8:_UNDEFINED"
- }
- "Entry"
- {
"MsmKey" = "8:_F671CE9CE9A64006AFFFAFBCBDA8EDCE"
"OwnerKey" = "8:_UNDEFINED"
"MsmSig" = "8:_UNDEFINED"
@@ -982,11 +976,6 @@
"ComponentsUrl" = "8:"
"Items"
{
-
"{EDC2488A-8267-493A-A98E-7D9C3B36CDF3}:Microsoft.Windows.Installer.2.0"
- {
- "Name" = "8:Windows Installer 2.0"
- "ProductCode" = "8:Microsoft.Windows.Installer.2.0"
- }
}
}
}
@@ -4057,26 +4046,6 @@
"IsDependency" = "11:FALSE"
"IsolateTo" = "8:"
}
-
"{1FB2D0AE-D3B9-43D4-B9DD-F88EC61E35DE}:_F4DDA57B13344198B902859413BF2B9D"
- {
- "SourcePath" = "8:lib\\monetdb5\\pqueue.mal"
- "TargetName" = "8:pqueue.mal"
- "Tag" = "8:"
- "Folder" = "8:_B593DAA0787744D6A44D17884E0C3951"
- "Condition" = "8:"
- "Transitive" = "11:FALSE"
- "Vital" = "11:TRUE"
- "ReadOnly" = "11:FALSE"
- "Hidden" = "11:FALSE"
- "System" = "11:FALSE"
- "Permanent" = "11:FALSE"
- "SharedLegacy" = "11:FALSE"
- "PackageAs" = "3:1"
- "Register" = "3:1"
- "Exclude" = "11:FALSE"
- "IsDependency" = "11:FALSE"
- "IsolateTo" = "8:"
- }
"{1FB2D0AE-D3B9-43D4-B9DD-F88EC61E35DE}:_F671CE9CE9A64006AFFFAFBCBDA8EDCE"
{
"SourcePath" = "8:lib\\monetdb5\\createdb\\23_skyserver.sql"
diff --git a/NT/installer32/cv64-32.sh b/NT/installer32/cv64-32.sh
--- a/NT/installer32/cv64-32.sh
+++ b/NT/installer32/cv64-32.sh
@@ -19,13 +19,13 @@
# this script is mostly to document what I did, not for regular use.
cp ../installer64/*.{vdproj,sln} .
-sed -i -e '/TargetPlatform/s/3:1/3:0/' \
- -e 's/win64/win32/' \
- -e 's/\[ProgramFiles64Folder\]/[ProgramFilesFolder]/' \
- -e 's/C:\\\\Program Files.*\\\\Common Files\\\\Merge
Modules\\\\Microsoft_VC100_CRT_x64.msm/C:\\\\Program Files\\\\Common
Files\\\\Merge Modules\\\\Microsoft_VC100_CRT_x86.msm/' \
- -e 's/"ProductCode" = "8:{.*/"ProductCode" =
"8:{66BABD32-D69D-4A89-A7F3-2655D4CD0641}"/' \
- -e 's/"PackageCode" = "8:{.*/"PackageCode" =
"8:{D9B2D386-1461-43BC-9A63-93F1BA0D7921}"/' \
- -e 's/"UpgradeCode" =
"8:{95ACBC8C-BC4B-4901-AF70-48B54A5C20F7}"/"UpgradeCode" =
"8:{C1F69378-3F5C-4120-8224-32F07D3458F3}"/' \
- -e 's/"UpgradeCode" =
"8:{8E6CDFDE-39B9-43D9-97B3-2440C012845C}"/"UpgradeCode" =
"8:{92C89C36-0E86-45E1-B3D8-0D6C91108F30}"/' \
- -e 's/"UpgradeCode" =
"8:{839D3C90-B578-41E2-A004-431440F9E899}"/"UpgradeCode" =
"8:{730C595B-DBA6-48D7-94B8-A98780AC92B6}"/' \
+sed -i~ -e '/TargetPlatform/s/3:1/3:0/' \
+ -e 's/win64/win32/' \
+ -e 's/\[ProgramFiles64Folder\]/[ProgramFilesFolder]/' \
+ -e 's/C:\\\\Program Files.*\\\\Common Files\\\\Merge
Modules\\\\Microsoft_VC100_CRT_x64.msm/C:\\\\Program Files\\\\Common
Files\\\\Merge Modules\\\\Microsoft_VC100_CRT_x86.msm/' \
+ -e 's/"ProductCode" = "8:{.*/"ProductCode" =
"8:{66BABD32-D69D-4A89-A7F3-2655D4CD0641}"/' \
+ -e 's/"PackageCode" = "8:{.*/"PackageCode" =
"8:{D9B2D386-1461-43BC-9A63-93F1BA0D7921}"/' \
+ -e 's/"UpgradeCode" =
"8:{95ACBC8C-BC4B-4901-AF70-48B54A5C20F7}"/"UpgradeCode" =
"8:{C1F69378-3F5C-4120-8224-32F07D3458F3}"/' \
+ -e 's/"UpgradeCode" =
"8:{8E6CDFDE-39B9-43D9-97B3-2440C012845C}"/"UpgradeCode" =
"8:{92C89C36-0E86-45E1-B3D8-0D6C91108F30}"/' \
+ -e 's/"UpgradeCode" =
"8:{839D3C90-B578-41E2-A004-431440F9E899}"/"UpgradeCode" =
"8:{730C595B-DBA6-48D7-94B8-A98780AC92B6}"/' \
*.vdproj
diff --git a/NT/installer64/MonetDB-ODBC-Installer.vdproj
b/NT/installer64/MonetDB-ODBC-Installer.vdproj
--- a/NT/installer64/MonetDB-ODBC-Installer.vdproj
+++ b/NT/installer64/MonetDB-ODBC-Installer.vdproj
@@ -1207,7 +1207,7 @@
{
"UseDynamicProperties" = "11:TRUE"
"IsDependency" = "11:FALSE"
- "SourcePath" = "8:C:\\Program Files (x86)\\Common Files\\Merge
Modules\\Microsoft_VC100_CRT_x64.msm"
+ "SourcePath" = "8:C:\\Program Files\\Common Files\\Merge
Modules\\Microsoft_VC100_CRT_x64.msm"
"Properties"
{
}
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