Changeset: e12a2261f3c7 for MonetDB
URL: https://dev.monetdb.org/hg/MonetDB?cmd=changeset;node=e12a2261f3c7
Modified Files:
CMakeLists.txt
cmake/FindCfitsio.cmake
sql/backends/monet5/vaults/fits/fits.c
Branch: cmake-fun
Log Message:
Compiling R integration on Windows, plus check fitsio.h file correctly.
diffs (98 lines):
diff --git a/CMakeLists.txt b/CMakeLists.txt
--- a/CMakeLists.txt
+++ b/CMakeLists.txt
@@ -1282,32 +1282,45 @@ if(NOT VALGRIND_FOUND)
set(VALGRIND_LIBRARIES "")
endif()
-set(R_HOME "")
+set(R_HOME "") # No R_HOME on Windows
set(R_INCLUDE_DIR "")
set(R_LIBRARIES "")
set(ENABLE_RINTEGRATION "AUTO" CACHE STRING "Enable support for R integration
into MonetDB (default=AUTO)") # Check with HAVE_LIBR
if(NOT ${ENABLE_RINTEGRATION} STREQUAL "NO")
- if(${ENABLE_RINTEGRATION} MATCHES "^YES|AUTO$")
- set(R_INTERPRETER "R")
+ message(STATUS "Checking for R interpreter instalation")
+ if(WIN32)
+ find_path(R_INCLUDE R.h)
+ find_library(R_LIBRARY R)
+ if(R_INCLUDE AND R_LIBRARY)
+ set(R_INCLUDE_DIR "${R_INCLUDE}")
+ set(R_LIBRARIES "${R_LIBRARY}")
+ set(HAVE_LIBR ON)
+ elseif(${ENABLE_RINTEGRATION} STREQUAL "YES")
+ message(FATAL_ERROR "R.h and R.lib required for R
integration support")
+ else()
+ message(STATUS "R.h and R.lib required for R
integration support")
+ endif()
else()
- set(R_INTERPRETER "${ENABLE_RINTEGRATION}")
- endif()
-
- message(STATUS "Checking major version of R interpreter")
- exec_program("${R_INTERPRETER}" ARGS "RHOME" OUTPUT_VARIABLE
R_HOME_OUTPUT RETURN_VALUE R_HOME_RC)
- exec_program("${R_INTERPRETER}" ARGS "CMD config --cppflags"
OUTPUT_VARIABLE R_CPP_OUTPUT RETURN_VALUE R_CPP_RC)
- exec_program("${R_INTERPRETER}" ARGS "CMD config --ldflags"
OUTPUT_VARIABLE R_LD_OUTPUT RETURN_VALUE R_LD_RC)
- if(R_HOME_RC EQUAL 0 AND R_CPP_RC EQUAL 0 AND R_LD_RC EQUAL 0)
- MT_clibsToCmake(${R_CPP_OUTPUT} R_INCLUDE_DIR)
- string(REPLACE "-fopenmp" "" R_LD_OUTPUT ${R_LD_OUTPUT}) # We
don't want to link to OpenMP
- string(REPLACE "-fopenmp=libgomp" "" R_LD_OUTPUT ${R_LD_OUTPUT})
- set(R_LIBRARIES "${R_LD_OUTPUT}")
- set(HAVE_LIBR ON)
- set(RHOME ${R_HOME_OUTPUT})
- elseif(${ENABLE_RINTEGRATION} STREQUAL "YES")
- message(FATAL_ERROR "R executable required for R integration
support")
- else()
- message(STATUS "R executable not found")
+ if(${ENABLE_RINTEGRATION} MATCHES "^YES|AUTO$")
+ set(R_INTERPRETER "R")
+ else()
+ set(R_INTERPRETER "${ENABLE_RINTEGRATION}")
+ endif()
+ exec_program("${R_INTERPRETER}" ARGS "RHOME" OUTPUT_VARIABLE
R_HOME_OUTPUT RETURN_VALUE R_HOME_RC)
+ exec_program("${R_INTERPRETER}" ARGS "CMD config --cppflags"
OUTPUT_VARIABLE R_CPP_OUTPUT RETURN_VALUE R_CPP_RC)
+ exec_program("${R_INTERPRETER}" ARGS "CMD config --ldflags"
OUTPUT_VARIABLE R_LD_OUTPUT RETURN_VALUE R_LD_RC)
+ if(R_HOME_RC EQUAL 0 AND R_CPP_RC EQUAL 0 AND R_LD_RC EQUAL 0)
+ MT_clibsToCmake(${R_CPP_OUTPUT} R_INCLUDE_DIR)
+ string(REPLACE "-fopenmp" "" R_LD_OUTPUT
${R_LD_OUTPUT}) # We don't want to link to OpenMP
+ string(REPLACE "-fopenmp=libgomp" "" R_LD_OUTPUT
${R_LD_OUTPUT})
+ set(R_LIBRARIES "${R_LD_OUTPUT}")
+ set(HAVE_LIBR ON)
+ set(RHOME ${R_HOME_OUTPUT})
+ elseif(${ENABLE_RINTEGRATION} STREQUAL "YES")
+ message(FATAL_ERROR "R executable required for R
integration support")
+ else()
+ message(STATUS "R executable not found")
+ endif()
endif()
endif()
diff --git a/cmake/FindCfitsio.cmake b/cmake/FindCfitsio.cmake
--- a/cmake/FindCfitsio.cmake
+++ b/cmake/FindCfitsio.cmake
@@ -6,7 +6,7 @@
# CFITSIO_FOUND - True if cfitsio found.
# Look for the header file.
-find_path(CFITSIO_INCLUDE_DIR NAMES fitsio.h)
+find_path(CFITSIO_INCLUDE_DIR NAMES cfitsio/fitsio.h)
# Look for the library.
find_library(CFITSIO_LIBRARIES NAMES cfitsio)
diff --git a/sql/backends/monet5/vaults/fits/fits.c
b/sql/backends/monet5/vaults/fits/fits.c
--- a/sql/backends/monet5/vaults/fits/fits.c
+++ b/sql/backends/monet5/vaults/fits/fits.c
@@ -17,9 +17,9 @@
/* clash with GDK? */
#undef ttype
-#include <fitsio.h>
-#include <fitsio2.h>
-#include <longnam.h>
+#include <cfitsio/fitsio.h>
+#include <cfitsio/fitsio2.h>
+#include <cfitsio/longnam.h>
#include "fits.h"
#include "mutils.h"
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