I looked at `dig eutils.ncbi.nlm.nih.gov +trace` and at `strace -f dig eutils.ncbi.nlm.nih.gov +trace` - it looks to me like NIH's nameservers are not willing to serve labs?
On Fri, 14 Jun 2019 at 05:59, Konrad Koehler via Cloud < [email protected]> wrote: > The following tool has been running without problem for years: > > https://tools.wmflabs.org/citation-template-filling/cgi-bin/index.cgi > > Recently the tool has started generating the following error message: > > Can't call method "findnodes" on an undefined value at > /data/project/citation-template-filling/perl/ActivePerl-5.26/site/lib/WWW/Search/PubMedLite.pm > line 117. > > PubMedLite.pm in turn makes a request to “' > https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi” for data. For > debugging, I queried the entrez server using an equivalent command in curl > which generated the following error messages: > > curl ' > https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pubmed&id=12345&retmode=xml > ' > > curl: (6) Could not resolve host: eutils.ncbi.nlm.nih.gov > > I also tried replacing “eutils.ncbi.nlm.nih.gov” with its IP address: > > curl 'https://130.14.29.110/entrez/eutils/efetch.fcgi?db=pubmed&id=12345' > > curl: (51) SSL: no alternative certificate subject name matches target > host name '130.14.29.110' > > The same curl command runs without problem on my local workstation: > > curl ' > https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pubmed&id=12345&retmode=xml > ’ > > <!DOCTYPE PubmedArticleSet PUBLIC "-//NLM//DTD PubMedArticle, 1st January > 2019//EN" "https://dtd.nlm.nih.gov/ncbi/pubmed/out/pubmed_190101.dtd";> … > > Anyone have an idea how to fix this? Thanks, > > Boghog > _______________________________________________ > Wikimedia Cloud Services mailing list > [email protected] (formerly [email protected]) > https://lists.wikimedia.org/mailman/listinfo/cloud
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