I now believe this is related to a thread back in December:

http://public.kitware.com/pipermail/cmake/2014-December/059298.html

It's super easy to reproduce: make a CMakeLists.txt file with
set(CMAKE_INSTALL_PREFIX "foo") and watch it get written to cmake_install.cmake
regardless of any command-line arguments or cache entries.

Tom Davis writes:

> I'm trying to install a project to /home/tom/usr/local instead of the standard
> /usr/local. I have tried the following:
>
> $ mkdir build && cd build
> $ cmake -DCMAKE_INSTALL_PREFIX:PATH=/home/tom ..
>
> At this point, I have a CMakeCache.txt file that contains the correct path. I
> have a cmake_install.cmake with the lines:
>
>     if(NOT DEFINED CMAKE_INSTALL_PREFIX)
>       set(CMAKE_INSTALL_PREFIX "foo")
>     endif()
>
> Where "foo" is found in the project's CMakeLists.txt as a default install 
> prefix
> via `set(CMAKE_INSTALL_PREFIX ${CMAKE_PROJECT_NAME})`. Unfortunately, when I 
> run
> `make install`, the project is still being installed to `build/foo/`. My
> apparently incorrect understanding is that passing the value on the command 
> line
> initially would override whatever was set() in the project's CMakeLists.txt, 
> but
> that isn't the case.
>
> Since I'm actually installing this project using ExternalProject_Add(), how 
> can
> I override the set() in the project's CMakeLists.txt, if not by using the 
> extra
> argument during the CONFIGURE step?
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