Script 'mail_helper' called by obssrc Hello community, here is the log from the commit of package bowtie for openSUSE:Factory checked in at 2022-05-19 22:49:13 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Comparing /work/SRC/openSUSE:Factory/bowtie (Old) and /work/SRC/openSUSE:Factory/.bowtie.new.1538 (New) ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "bowtie" Thu May 19 22:49:13 2022 rev:5 rq:977947 version:1.3.1 Changes: -------- --- /work/SRC/openSUSE:Factory/bowtie/bowtie.changes 2021-04-22 18:06:07.502710765 +0200 +++ /work/SRC/openSUSE:Factory/.bowtie.new.1538/bowtie.changes 2022-05-19 22:49:22.866339587 +0200 @@ -1,0 +2,15 @@ +Wed May 18 12:39:25 UTC 2022 - Dominique Leuenberger <[email protected]> + +- Update to version 1.3.1: + + Fixed an overflow issue in `bowtie-build` that would sometimes + yield corrupt "large" (64-bit) indexes; the resulting index + would sometimes cause `bowtie` to hang. Note: `bowtie2-build` + does not have this issue. + + Fixed an issue in `bowtie` causing XM:i SAM optional field to + sometimes be off by 1 when using the `-m/-M` flags. + + Fixed an issue that would sometimes cause deadlocks in `bowtie` + when running multithreaded. + + Fixed an issue causing build errors when compiling against + a pre-C++11 standard. + +------------------------------------------------------------------- Old: ---- bowtie-1.3.0.tar.gz New: ---- bowtie-1.3.1.tar.gz ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Other differences: ------------------ ++++++ bowtie.spec ++++++ --- /var/tmp/diff_new_pack.XrHCXi/_old 2022-05-19 22:49:24.906342203 +0200 +++ /var/tmp/diff_new_pack.XrHCXi/_new 2022-05-19 22:49:24.910342207 +0200 @@ -1,7 +1,7 @@ # # spec file for package bowtie # -# Copyright (c) 2021 SUSE LLC +# Copyright (c) 2022 SUSE LLC # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -17,7 +17,7 @@ Name: bowtie -Version: 1.3.0 +Version: 1.3.1 Release: 0 Summary: Fast and memory-efficient short read aligner License: Artistic-1.0 ++++++ bowtie-1.3.0.tar.gz -> bowtie-1.3.1.tar.gz ++++++ /work/SRC/openSUSE:Factory/bowtie/bowtie-1.3.0.tar.gz /work/SRC/openSUSE:Factory/.bowtie.new.1538/bowtie-1.3.1.tar.gz differ: char 12, line 1
