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Hello community,
here is the log from the commit of package python-dtaidistance for
openSUSE:Factory checked in at 2023-09-04 22:53:11
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Comparing /work/SRC/openSUSE:Factory/python-dtaidistance (Old)
and /work/SRC/openSUSE:Factory/.python-dtaidistance.new.1766 (New)
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "python-dtaidistance"
Mon Sep 4 22:53:11 2023 rev:5 rq:1108782 version:2.3.10
Changes:
--------
--- /work/SRC/openSUSE:Factory/python-dtaidistance/python-dtaidistance.changes
2023-03-02 23:04:01.739979023 +0100
+++
/work/SRC/openSUSE:Factory/.python-dtaidistance.new.1766/python-dtaidistance.changes
2023-09-04 22:53:40.623968674 +0200
@@ -1,0 +2,5 @@
+Thu Aug 31 09:10:04 UTC 2023 - Markéta Machová <[email protected]>
+
+- Add upstream cython3.patch
+
+-------------------------------------------------------------------
New:
----
cython3.patch
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Other differences:
------------------
++++++ python-dtaidistance.spec ++++++
--- /var/tmp/diff_new_pack.2LRMAP/_old 2023-09-04 22:53:42.320028625 +0200
+++ /var/tmp/diff_new_pack.2LRMAP/_new 2023-09-04 22:53:42.364030181 +0200
@@ -24,6 +24,8 @@
License: Apache-2.0
URL: https://github.com/wannesm/dtaidistance
Source:
https://github.com/wannesm/dtaidistance/archive/v%{version}.tar.gz#/dtaidistance-%{version}.tar.gz
+#PATCH-FIX-UPSTREAM
https://github.com/wannesm/dtaidistance/commit/a4b4bbf4be5bac7b95210b993ee24213bc2a0a36
Fix build for Cython v3.0.0
+Patch: cython3.patch
BuildRequires: %{python_module Cython}
BuildRequires: %{python_module pip}
BuildRequires: %{python_module wheel}
@@ -50,7 +52,7 @@
Library for time series distances (e.g. Dynamic Time Warping, DTW).
%prep
-%setup -q -n dtaidistance-%{version}
+%autosetup -p1 -n dtaidistance-%{version}
%build
export CFLAGS="%{optflags}"
@@ -65,14 +67,6 @@
%check
# Test are too slow in x86
%ifnarch %{ix86}
-python36_parameter="-c pytest-nolibs.ini \
---ignore tests/test_alignment.py \
---ignore tests/test_benchmark.py \
---ignore tests/test_dtw2d.py \
---ignore tests/test_dtw_weighted.py \
---ignore tests/test_dtw_weighted_dt.py \
---ignore tests/test_penalty.py \
-"
# openMP library mismatch (symbol in libgomp not found) -- use use_mp=True"
donttest+=" or (test_clustering and test_clustering_tree_ndim)"
donttest+=" or (test_dtw and test_distance_matrix2_e)"
@@ -82,7 +76,7 @@
# Broken tests with latest numpy >= 1.24
donttest+=" or test_bug3 or test_distance1_a"
-%pytest_arch ${$python_parameter} ${donttest:+ -k "not (${donttest:4})"} -m
"not benchmark"
+%pytest_arch ${donttest:+ -k "not (${donttest:4})"} -m "not benchmark"
%endif
%files %{python_files}
++++++ cython3.patch ++++++
>From a4b4bbf4be5bac7b95210b993ee24213bc2a0a36 Mon Sep 17 00:00:00 2001
From: Pieter Robberechts <[email protected]>
Date: Tue, 25 Jul 2023 16:34:07 +0200
Subject: [PATCH] Fix build for Cython v3.0.0
Fixes #195
---
setup.py | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/setup.py b/setup.py
index de52e266..a5458591 100755
--- a/setup.py
+++ b/setup.py
@@ -403,7 +403,7 @@ def check_openmp(cc_bin, noxpreprocessor, printfn=print):
extensions.append(
Extension(
"dtaidistance.dtw_cc",
- ["dtaidistance/dtw_cc.pyx", "dtaidistance/dtw_cc.pxd",
+ ["dtaidistance/dtw_cc.pyx",
"dtaidistance/lib/DTAIDistanceC/DTAIDistanceC/dd_dtw.c",
"dtaidistance/lib/DTAIDistanceC/DTAIDistanceC/dd_ed.c"
],
@@ -447,8 +447,8 @@ def check_openmp(cc_bin, noxpreprocessor, printfn=print):
else:
print("WARNING: Numpy was not found, preparing a version without Numpy
support.")
- ext_modules = cythonize(extensions)
- # compiler_directives={'language_level': "3"})
+ ext_modules = cythonize(extensions, language_level=2)
+
else:
print("WARNING: Cython was not found, preparing a pure Python version.")
ext_modules = []
