Script 'mail_helper' called by obssrc Hello community, here is the log from the commit of package python-physt for openSUSE:Factory checked in at 2024-09-02 13:13:46 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Comparing /work/SRC/openSUSE:Factory/python-physt (Old) and /work/SRC/openSUSE:Factory/.python-physt.new.2698 (New) ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "python-physt" Mon Sep 2 13:13:46 2024 rev:8 rq:1198010 version:0.7.4 Changes: -------- --- /work/SRC/openSUSE:Factory/python-physt/python-physt.changes 2024-07-08 19:08:53.996143736 +0200 +++ /work/SRC/openSUSE:Factory/.python-physt.new.2698/python-physt.changes 2024-09-02 13:13:52.080899121 +0200 @@ -1,0 +2,27 @@ +Fri Aug 30 13:38:42 UTC 2024 - Ben Greiner <c...@bnavigator.de> + +- Update to 0.7.4 + * Dependency: allow numpy 1.22 again +- Release 0.7.3 + * Improved: dealing with extremely narrow bin ranges + * Fixed: mypy and pytest issues + * Fixed: compatibility with polars 1.0 +- Release 0.7.2 + * Improved: stats box in plots +- Release 0.7.1 + * Fixed: Newer polars compatibility, deal with Nones + * Added: .physt accessors for polars series and dataframes +- Release 0.7.0 + * Added: Support for pola.rs series/dataframes + * Moved: xarray support as a separate module in physt.compat + * Removed: physt.special (use physt.special_histograms instead) + * Added: stats_loc arg to locate stats box in plots + * Added: Pretty printing with rich library + * Changed: Moved most configuration to pyproject.toml + * Improved: Much more testing and edge-case bug fixes + * Support: Removed Python 3.7 and numpy <1.22, added 3.11 + * Renamed: human binning => pretty binning (with deprecation + warning) +- Unpin numpy 2: Add physt-pr116-np2.patch gh#janpipek/physt#116 + +------------------------------------------------------------------- Old: ---- physt-0.5.3.tar.gz New: ---- physt-0.7.4.tar.gz physt-pr116-np2.patch BETA DEBUG BEGIN: New: warning) - Unpin numpy 2: Add physt-pr116-np2.patch gh#janpipek/physt#116 BETA DEBUG END: ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Other differences: ------------------ ++++++ python-physt.spec ++++++ --- /var/tmp/diff_new_pack.0KAHeW/_old 2024-09-02 13:13:53.760968989 +0200 +++ /var/tmp/diff_new_pack.0KAHeW/_new 2024-09-02 13:13:53.760968989 +0200 @@ -17,22 +17,25 @@ Name: python-physt -Version: 0.5.3 +Version: 0.7.4 Release: 0 Summary: Python histogram library License: MIT URL: https://github.com/janpipek/physt Source: https://github.com/janpipek/physt/archive/v%{version}.tar.gz#/physt-%{version}.tar.gz +# PATCH-FIX-UPSTREAM physt-pr116-np2.patch gh#janpipek/physt#116 +Patch0: physt-pr116-np2.patch BuildRequires: %{python_module base >= 3.7} BuildRequires: %{python_module pip} BuildRequires: %{python_module setuptools} BuildRequires: %{python_module wheel} BuildRequires: fdupes BuildRequires: python-rpm-macros +Requires: python-hypothesis >= 6.96.1 +Requires: python-numpy >= 1.22 Requires: python-packaging Requires: python-typing-extensions -Requires: (python-numpy >= 1.20 with python-numpy < 2) -Recommends: python-dask +Recommends: python-dask-array Recommends: python-folium Recommends: python-matplotlib Recommends: python-pandas @@ -43,11 +46,12 @@ BuildArch: noarch # SECTION test requirements BuildRequires: %{python_module dask-array} +BuildRequires: %{python_module hypothesis >= 6.96.1} BuildRequires: %{python_module matplotlib} -BuildRequires: %{python_module numpy >= 1.20 with %python-numpy < 2} +BuildRequires: %{python_module numpy >= 1.22} BuildRequires: %{python_module packaging} BuildRequires: %{python_module pandas} -BuildRequires: %{python_module plotly if %python-base >= 3.10} +BuildRequires: %{python_module plotly} BuildRequires: %{python_module pytest} BuildRequires: %{python_module typing-extensions} # /SECTION @@ -63,7 +67,7 @@ options. %prep -%setup -q -n physt-%{version} +%autosetup -p1 -n physt-%{version} %build %pyproject_wheel @@ -74,7 +78,8 @@ %python_expand %fdupes %{buildroot}%{$python_sitelib} %check -%pytest +# no polars +%pytest --ignore tests/compat/test_polars.py %files %{python_files} %doc README.md ++++++ physt-0.5.3.tar.gz -> physt-0.7.4.tar.gz ++++++ ++++ 28880 lines of diff (skipped) ++++++ physt-pr116-np2.patch ++++++ >From 52b0de940dbfb21c8c2f4ca2570a89838f51345f Mon Sep 17 00:00:00 2001 From: Ben Greiner <c...@bnavigator.de> Date: Fri, 30 Aug 2024 16:23:22 +0200 Subject: [PATCH 1/2] replace np.deprecate removed from numpy 2 --- src/physt/helpers/__init__.py | 18 ++++++++++++++++++ src/physt/histogram1d.py | 11 ++++++----- 2 files changed, 24 insertions(+), 5 deletions(-) diff --git a/src/physt/helpers/__init__.py b/src/physt/helpers/__init__.py index e69de29..50a6a25 100644 --- a/src/physt/helpers/__init__.py +++ b/src/physt/helpers/__init__.py @@ -0,0 +1,18 @@ +"""Helper functions""" +from collections.abc import Callable +import warnings + +class deprecate(object): + """Decorate a function to emit a DeprecationWarning.""" + + def __init__(self, message: str=""): + self.message = message + + def __call__(self, func: Callable) -> Callable: + """Emit DeprecationWarning and call the funcion.""" + + def wrapped_func(*args, **kwargs): + warnings.warn(self.message, DeprecationWarning, stacklevel=2) + return func(*args, **kwargs) + + return wrapped_func diff --git a/src/physt/histogram1d.py b/src/physt/histogram1d.py index cd39a4f..9cbcae1 100644 --- a/src/physt/histogram1d.py +++ b/src/physt/histogram1d.py @@ -13,6 +13,7 @@ extract_1d_array, extract_weights, ) +from physt.helpers import deprecate from physt.histogram_base import HistogramBase from physt.statistics import INVALID_STATISTICS, Statistics @@ -322,23 +323,23 @@ def inner_missed(self): def inner_missed(self, value): self._missed[2] = value - @np.deprecate(message="Please use .statistics.mean instead.") + @deprecate(message="Please use .statistics.mean instead.") def mean(self) -> float: return self.statistics.mean() - @np.deprecate(message="Please use .statistics.min instead.") + @deprecate(message="Please use .statistics.min instead.") def min(self) -> float: return self.statistics.min - @np.deprecate(message="Please use .statistics.max instead.") + @deprecate(message="Please use .statistics.max instead.") def max(self) -> float: return self.statistics.max - @np.deprecate(message="Please use .statistics.std instead.") + @deprecate(message="Please use .statistics.std instead.") def std(self) -> float: # , ddof=0): return self.statistics.std() - @np.deprecate(message="Please use .statistics.variance instead.") + @deprecate(message="Please use .statistics.variance instead.") def variance(self) -> float: # , ddof: int = 0) -> float: return self.statistics.variance() >From 37732fd0aa621b0eeeb1919685167696e8ba4f7b Mon Sep 17 00:00:00 2001 From: Ben Greiner <c...@bnavigator.de> Date: Fri, 30 Aug 2024 16:27:06 +0200 Subject: [PATCH 2/2] unpin numpy <2 --- pyproject.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/pyproject.toml b/pyproject.toml index 0d2760c..0d698d3 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -16,7 +16,7 @@ classifiers = [ "Topic :: Software Development :: Libraries :: Python Modules", ] dependencies = [ - "numpy>=1.22,<2.0", + "numpy>=1.22", "packaging", "typing_extensions", "hypothesis>=6.96.1",
