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here is the log from the commit of package python-scipy for openSUSE:Factory
checked in at 2025-02-04 18:10:44
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Comparing /work/SRC/openSUSE:Factory/python-scipy (Old)
and /work/SRC/openSUSE:Factory/.python-scipy.new.2316 (New)
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "python-scipy"
Tue Feb 4 18:10:44 2025 rev:78 rq:1242918 version:1.15.1
Changes:
--------
--- /work/SRC/openSUSE:Factory/python-scipy/python-scipy.changes
2024-11-20 16:59:14.030959516 +0100
+++ /work/SRC/openSUSE:Factory/.python-scipy.new.2316/python-scipy.changes
2025-02-04 18:11:22.796683567 +0100
@@ -1,0 +2,33 @@
+Mon Feb 3 15:44:53 UTC 2025 - Markéta Machová <mmach...@suse.com>
+
+- Add test_hyp2fi-tolerance.patch to fix test failure on i586
+
+-------------------------------------------------------------------
+Fri Jan 31 12:07:07 UTC 2025 - Markéta Machová <mmach...@suse.com>
+
+- Update to 1.15.1
+ * This release requires Python 3.10-3.13 and NumPy 1.23.5 or greater.
+ * Sparse arrays are now fully functional for 1-D and 2-D arrays. We recommend
+ that all new code use sparse arrays instead of sparse matrices and that
+ developers start to migrate their existing code from sparse matrix to
sparse
+ array: migration_to_sparray. Both sparse.linalg and sparse.csgraph
+ work with either sparse matrix or sparse array and work internally with
+ sparse array.
+ * Sparse arrays now provide basic support for n-D arrays in the COO format
+ including add, subtract, reshape, transpose, matmul,
+ dot, tensordot and others.
+ * Preliminary support for free-threaded Python 3.13.
+ * New probability distribution features in scipy.stats can be used to improve
+ the speed and accuracy of existing continuous distributions and perform new
+ probability calculations.
+ * Several new features support vectorized calculations with Python Array API
+ Standard compatible input
+ * scipy.interpolate.AAA adds the AAA algorithm for barycentric rational
+ approximation of real or complex functions.
+ * scipy.special adds new functions offering improved Legendre function
+ implementations with a more consistent interface.
+- Drop upstreamed patches:
+ * scipy-pr21063-gcc14.patch
+ * scipy-pybind11-2.13.patch
+
+-------------------------------------------------------------------
Old:
----
scipy-1.14.1.tar.gz
scipy-pr21063-gcc14.patch
scipy-pybind11-2.13.patch
New:
----
scipy-1.15.1.tar.gz
test_hyp2fi-tolerance.patch
BETA DEBUG BEGIN:
Old:- Drop upstreamed patches:
* scipy-pr21063-gcc14.patch
* scipy-pybind11-2.13.patch
Old: * scipy-pr21063-gcc14.patch
* scipy-pybind11-2.13.patch
BETA DEBUG END:
BETA DEBUG BEGIN:
New:
- Add test_hyp2fi-tolerance.patch to fix test failure on i586
BETA DEBUG END:
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Other differences:
------------------
++++++ python-scipy.spec ++++++
--- /var/tmp/diff_new_pack.D1LtKL/_old 2025-02-04 18:11:25.204782918 +0100
+++ /var/tmp/diff_new_pack.D1LtKL/_new 2025-02-04 18:11:25.208783083 +0100
@@ -1,7 +1,7 @@
#
# spec file for package python-scipy
#
-# Copyright (c) 2024 SUSE LLC
+# Copyright (c) 2025 SUSE LLC
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
@@ -18,7 +18,7 @@
%{?sle15_python_module_pythons}
%global flavor @BUILD_FLAVOR@%{nil}
-%define _ver 1_13_1
+%define _ver 1_15_1
%define shortname scipy
%define pname python-%{shortname}
%define hpc_upcase_trans_hyph() %(echo %{**} | tr [a-z] [A-Z] | tr '-' '_')
@@ -93,7 +93,7 @@
# TODO explore debundling Boost for standard and hpc
Name: %{package_name}
-Version: 1.14.1
+Version: 1.15.1
Release: 0
Summary: Scientific Tools for Python
License: BSD-3-Clause AND LGPL-2.0-or-later AND BSL-1.0
@@ -101,15 +101,13 @@
Source0:
https://files.pythonhosted.org/packages/source/s/scipy/scipy-%{version}.tar.gz
# Create with pooch: `python3
scipy-%%{version}/scipy/datasets/_download_all.py scipy-datasets/scipy-data;
tar czf scipy-datasets.tar.gz scipy-datasets`
Source1: scipy-datasets.tar.gz
-# PATCH-FIX-UPSTREAM scipy-pr21063-gcc14.patch gh#scipy/scipy#21063 - MAINT:
gcc-14 test_region5 tol bump
-Patch0:
https://github.com/scipy/scipy/pull/21063.patch#/scipy-pr21063-gcc14.patch
-# PATCH-FIX-UPSTREAM scipy-pybind11-2.13.patch gh#scipy/scipy#21199 -- commit
1ea9f1dc0ac4e871b7a54a8f3b12a01ac7d5f3d7
-Patch1: scipy-pybind11-2.13.patch
+# PATCH-FIX-UPSTREAM https://github.com/scipy/scipy/pull/22364 TST: bump
tolerance on TestHyp2f1.test_region3[hyp2f1_test_case23]
+Patch0: test_hyp2fi-tolerance.patch
BuildRequires: %{python_module Cython >= 3.0.8 with %python-Cython < 3.1}
-BuildRequires: %{python_module devel >= 3.9}
-BuildRequires: %{python_module meson-python >= 0.15.0 with
%python-meson-python < 0.18}
+BuildRequires: %{python_module devel >= 3.10}
+BuildRequires: %{python_module meson-python >= 0.15.0 with
%python-meson-python < 0.20}
BuildRequires: %{python_module pip}
-BuildRequires: %{python_module pybind11-devel >= 2.13.1 with
%python-pybind11-devel < 2.14}
+BuildRequires: %{python_module pybind11-devel >= 2.13.2 with
%python-pybind11-devel < 2.14}
# Upstream's pre-emptive pin to < 0.16 is not necessary
BuildRequires: %{python_module pythran >= 0.14 with %python-pythran < 0.18}
BuildRequires: fdupes
@@ -127,7 +125,7 @@
BuildRequires: %{python_module threadpoolctl}
%endif
%if %{without hpc}
-BuildRequires: %{python_module numpy-devel >= 1.23.5 with %python-numpy-devel
< 2.3}
+BuildRequires: %{python_module numpy-devel >= 1.23.5 with %python-numpy-devel
< 2.5}
%if 0%{?sle_version} && 0%{?sle_version} <= 150600
# The default gcc on SLE15 is gcc7 we need something newer
BuildRequires: gcc10-c++
@@ -136,7 +134,7 @@
BuildRequires: gcc-c++ >= 8
BuildRequires: gcc-fortran >= 8
%endif
-Requires: (python-numpy >= 1.22.4 with python-numpy < 2.3)
+Requires: (python-numpy >= 1.23.5 with python-numpy < 2.5)
Suggests: python-pooch
%if %{with openblas}
BuildRequires: openblas-devel
@@ -177,8 +175,8 @@
%if !%{with openblas}
# Edit the options file until we have a way to provide options to meson-python
from command line or environment
# https://github.com/mesonbuild/meson-python/issues/230
https://github.com/mesonbuild/meson-python/issues/235
-sed -i "s/option('blas', type: 'string', value: 'openblas'/option('blas',
type: 'string', value: 'blas'/" meson_options.txt
-sed -i "s/option('lapack', type: 'string', value: 'openblas'/option('lapack',
type: 'string', value: 'lapack'/" meson_options.txt
+sed -i "s/option('blas', type: 'string', value: 'openblas'/option('blas',
type: 'string', value: 'blas'/" meson.options
+sed -i "s/option('lapack', type: 'string', value: 'openblas'/option('lapack',
type: 'string', value: 'lapack'/" meson.options
%endif
%if !%{with test}
++++++ scipy-1.14.1.tar.gz -> scipy-1.15.1.tar.gz ++++++
/work/SRC/openSUSE:Factory/python-scipy/scipy-1.14.1.tar.gz
/work/SRC/openSUSE:Factory/.python-scipy.new.2316/scipy-1.15.1.tar.gz differ:
char 5, line 1
++++++ scipy-datasets.tar.gz ++++++
++++++ test_hyp2fi-tolerance.patch ++++++
>From 7372d710ef6e97a3a9f3027efcf6b5b77bb33777 Mon Sep 17 00:00:00 2001
From: Jake Bowhay <60778417+j-bow...@users.noreply.github.com>
Date: Sun, 19 Jan 2025 07:25:47 -0600
Subject: [PATCH] TST: bump tolerance on
TestHyp2f1.test_region3[hyp2f1_test_case23] (#22364)
---
scipy/special/tests/test_hyp2f1.py | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/scipy/special/tests/test_hyp2f1.py
b/scipy/special/tests/test_hyp2f1.py
index aacf978e06dd..4321670e8291 100644
--- a/scipy/special/tests/test_hyp2f1.py
+++ b/scipy/special/tests/test_hyp2f1.py
@@ -1135,7 +1135,7 @@ def test_region2(self, hyp2f1_test_case):
c=8.5,
z=(0.7368421052631575+0.5263157894736841j),
expected=(6.468457061368628+24.190040684917374j),
- rtol=5e-16,
+ rtol=6e-16,
),
),
pytest.param(
