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openSUSE:Factory checked in at 2026-05-28 17:28:53
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Comparing /work/SRC/openSUSE:Factory/python-photutils (Old)
and /work/SRC/openSUSE:Factory/.python-photutils.new.1937 (New)
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "python-photutils"
Thu May 28 17:28:53 2026 rev:31 rq:1355561 version:3.0.0
Changes:
--------
--- /work/SRC/openSUSE:Factory/python-photutils/python-photutils.changes
2025-09-22 16:40:40.099903573 +0200
+++
/work/SRC/openSUSE:Factory/.python-photutils.new.1937/python-photutils.changes
2026-05-28 17:29:35.386302016 +0200
@@ -1,0 +2,429 @@
+Thu May 28 07:49:41 UTC 2026 - Ben Greiner <[email protected]>
+
+- Update to 3.0.0
+ ## New Features
+ ### photutils.aperture
+ * The to_sky and to_pixel methods for all pixel and sky aperture
+ types now use the local WCS Jacobian to accurately compute
+ pixel scale factors and rotation angles. This correctly handles
+ WCS with distortions (e.g., SIP polynomial corrections) and
+ non-square pixels. [#2240]
+ ### photutils.background
+ * Added a to_aperture method to LocalBackground. [#2118]
+ ### photutils.centroids
+ * Added a CentroidQuadratic class to provide an object-oriented
+ interface to the centroid_quadratic function. [#2163, #2169]
+ ### photutils.detection
+ * Added a public StarFinderCatalogBase class that provides a
+ common base for the catalogs in the DAOStarFinder,
+ IRAFStarFinder, and StarFinder classes. [#2149, #2201]
+ * Added __repr__ and __str__ methods to DAOStarFinder,
+ IRAFStarFinder, and StarFinder. [#2201]
+ * Significantly improved the performance of DAOStarFinder,
+ IRAFStarFinder, and StarFinder by vectorizing cutout extraction
+ and image moment computation. [#2201]
+ * The threshold parameter in DAOStarFinder, IRAFStarFinder, and
+ StarFinder now accepts a 2D array in addition to a scalar
+ value, allowing for spatially varying detection thresholds.
+ [#2202]
+ * Added a scale_threshold parameter to DAOStarFinder. When set to
+ False, the input threshold is applied directly to the convolved
+ data without the default kernel-based scaling. [#2202]
+ * Added a min_separation keyword to find_peaks. The
+ implementation uses fast separable box filters and is
+ approximately 10-400x faster than using an explicit circular
+ footprint with scipy.ndimage.maximum_filter (depending on the
+ radius), while producing identical results. [#2246]
+ ### photutils.profiles
+ * Added a EnsquaredCurveOfGrowth class to compute a curve of
+ growth using concentric square apertures. [#2184]
+ * Added a EllipticalCurveOfGrowth class to compute a curve of
+ growth using concentric elliptical apertures with a fixed axis
+ ratio and orientation. [#2184]
+ * Added moffat_fit, moffat_profile, and moffat_fwhm properties to
+ RadialProfile for fitting a 1D Moffat model to the radial
+ profile. [#2185]
+ ### photutils.psf
+ * Added a SourceGroups class that stores the results of grouping
+ sources and provides methods to analyze and plot the groupings.
+ [#2116]
+ * Added remove_invalid and reset_ids keywords to the
+ results_to_init_params and results_to_model_params methods of
+ PSFPhotometry and IterativePSFPhotometry. [#2131]
+ * Added a decode_flags convenience method to PSFPhotometry and
+ IterativePSFPhotometry classes to decode the bitwise flags from
+ the results table. [#2132, #2136]
+ * Added a return_bit_flags keyword to the decode_psf_flags
+ function. [#2136]
+ * Added __repr__ methods to ImagePSF and GriddedPSFModel. [#2134]
+ * Added a shape property to ImagePSF. [#2158]
+ * EPSFBuilder now automatically excludes stars that repeatedly
+ fail fitting and emits warnings with specific failure reasons.
+ [#2158, #2165]
+ * Added validation and automatic shape handling for
+ fit_shape=None in fit_2dgaussian and fit_fwhm. The functions
+ now require explicit fit_shape for multiple sources and emit an
+ informative warning for single-source fitting. [#2164]
+ * The fit_fwhm and fit_2dgaussian xypos value can now be input as
+ a zip object. [#2164]
+ ### photutils.psf_matching
+ * Added a regularization keyword to make_kernel to regularize
+ division by near-zero values in the source Optical Transfer
+ Function. [#2170, #2171, #2175]
+ * Added make_wiener_kernel function that uses Wiener
+ regularization to make a PSF matching kernel. [#2171, #2172,
+ #2175]
+ * make_kernel now validates input PSFs (2D, odd dimensions,
+ centered) and the window function output. [#2170]
+ * resize_psf now validates input PSFs and pixel scales. [#2170]
+ * Added __repr__ methods to CosineBellWindow, HanningWindow,
+ SplitCosineBellWindow, TopHatWindow, and TukeyWindow classes.
+ [#2176]
+ ### photutils.segmentation
+ * The SourceCatalog fluxfrac_radius now caches results by
+ fluxfrac value. Repeated calls with the same fluxfrac return
+ the cached result without recomputation. [#2197]
+ * The radial step used when searching for a bracketing interval
+ in SourceCatalog fluxfrac_radius is now set to 10% of the
+ current max_radius, bounding the fallback loop to at most ~10
+ iterations regardless of source size. [#2197]
+ * Improved the performance (~6-9x speedup) of SourceCatalog
+ min_value, max_value, segment_flux, segment_flux_err,
+ background_sum, and background_mean. [#2199]
+ * Added SegmentationImage get_segment and get_segments methods to
+ return the Segment object(s) for a given label or list of
+ labels. [#2228, #2256]
+ * Added the ability to input RegionVisual keywords to the
+ SegmentationImage to_regions method. [#2228]
+ * Added SegmentationImage get_polygon, get_polygons, get_patch,
+ get_patches, get_region, and get_regions methods to return the
+ polygon, patch, or region for a given segment label or list of
+ labels. [#2232]
+ * Improved the performance of the SegmentationImage keep_labels
+ method and missing_labels attribute. [#2234]
+ * Improved the performance of SourceCatalog centroid_win (~3.5x
+ speedup), centroid_quad, fluxfrac_radius (~6x speedup),
+ kron_radius (~2x speedup), moments, moments_central, perimeter,
+ and Kron photometry. [#2238]
+ ### photutils.utils
+ * Significantly improved the performance (by factors of 3 or
+ more) of ShepardIDWInterpolator [#2187].
+ * Added a use_future_column_names context manager for temporarily
+ enabling future column names in a scoped, thread-safe, and
+ async-safe way without modifying the global
+ photutils.future_column_names flag. [#2258]
+ ## Bug Fixes
+ ### photutils.background
+ * Fixed Background2D raising AttributeError when passed a
+ function as bkg_estimator or bkgrms_estimator instead of a
+ class instance with a sigma_clip attribute. [#2181]
+ * Fixed silent truncation of background estimates when integer
+ input data were provided to Background2D. Integer inputs now
+ produce np.float32 output to preserve precision from
+ interpolation. [#2181]
+ ### photutils.centroids
+ * Fixed a bug in centroid_sources where the input error array
+ could be ignored if more than one source was input. [#2179]
+ ### photutils.datasets
+ * Fixed a bug in apply_poisson_noise where the returned image
+ could have a different dtype than the input. [#2173]
+ ### photutils.detection
+ * Fixed StarFinder mutating the input kernel array during
+ normalization. [#2201]
+ * Fixed an edge case of find_peaks not excluding NaN pixel
+ locations from peak detection, which could produce false peaks
+ when the NaN fill value was a local maximum. [#2247]
+ ### photutils.isophote
+ * build_ellipse_model now integrates over all angles instead of
+ stopping once it hits the edge of the output image. [#2156]
+ ### photutils.morphology
+ * Fixed issues with negative pixel values input to gini. [#2178]
+ ### photutils.profiles
+ * Fixed an issue where the mask (input and non-finite values) was
+ not applied to the raw data profile. [#2184]
+ ### photutils.psf
+ * PSFPhotometry and IterativePSFPhotometry now handle non-finite
+ (NaN or inf) local background values instead of raising an
+ error. Three new flags have been added to identify sources with
+ non-finite values: flag 512 for non-finite fitted positions,
+ flag 1024 for non-finite fitted flux, and flag 2048 for
+ non-finite local background. [#2131]
+ * Fixed a bug in EPSFBuilder where the recentering_boxsize was
+ being applied in oversampled space instead of the original star
+ pixel space. [#2168]
+ ### photutils.segmentation
+ * Fixed a bug in SourceCatalog where the (x, y) coordinates were
+ swapped in the map_coordinates call used to interpolate the
+ background at source centroids, causing background_centroid to
+ return incorrect values. [#2198]
+ * Fixed an issue in SourceCatalog where incorrect masking
+ behavior could occur when apermask_method='none'. [#2198]
+ * Fixed an issue in SourceCatalog where unrealistically large
+ kron_radius values could cause out-of-memory issues. [#2237]
+ ## API Changes
+ ####photutils
+ * Passing optional arguments positionally to all functions,
+ classes, and methods in photutils is now deprecated. In the
+ future, all optional arguments must be passed as keyword
+ arguments. [#2219]
+ ### photutils.aperture
+ * The ApertureStats covar_sigx2, covar_sigxy, and covar_sigy2
+ attributes have been renamed to covariance_xx, covariance_xy,
+ and covariance_yy, respectively. The old names are deprecated.
+ [#2241]
+ * The ApertureStats cxx, cxy, and cyy attributes have been
+ renamed to ellipse_cxx, ellipse_cxy, and ellipse_cyy,
+ respectively. The old names are deprecated. [#2241]
+ * The ApertureStats data_sumcutout and error_sumcutout attributes
+ have been renamed to data_sum_cutout and error_sum_cutout,
+ respectively. The old names are deprecated. [#2241]
+ * The ApertureStats get_id and get_ids methods have been renamed
+ to select_id and select_ids, respectively. The old names are
+ deprecated. [#2241]
+ * The ApertureStats semimajor_sigma and semiminor_sigma
+ attributes/columns have been renamed to semimajor_axis and
+ semiminor_axis, respectively. The old names are deprecated.
+ [#2241]
+ * The ApertureStats xcentroid and ycentroid attributes/columns
+ have been renamed to x_centroid and y_centroid, respectively.
+ The old names are deprecated. [#2241]
+ * The xcenter and ycenter column names in the table returned by
+ aperture_photometry have been renamed to x_center and y_center,
+ respectively. The old names are deprecated. [#2241]
+ * The CircularMaskMixin, EllipticalMaskMixin, and
+ RectangularMaskMixin classes are now deprecated. The mask
+ generation is now handled internally by the PixelAperture base
+ class. [#2242]
+ ### photutils.background
+ * Removed the deprecated edge_method keyword from Background2D.
+ [#2102]
+ * Removed the deprecated background_mesh_masked,
+ background_rms_mesh_masked, and mesh_nmasked properties from
+ Background2D. [#2102]
+ * Removed the deprecated grid_mode keyword from
+ BkgZoomInterpolator. [#2102]
+ * The interpolator keyword argument for Background2D is now
+ deprecated. When interpolator is eventually removed, the
+ scipy.ndimage.zoom cubic spline interpolator will always be
+ used to resize the low-resolution arrays. The behavior will be
+ identical to the current default. [#2108]
+ * The Background2D npixels_mesh and npixels_map properties have
+ been renamed to n_pixels_mesh and n_pixels_map, respectively.
+ The old names are deprecated. [#2241]
+ * The BkgIDWInterpolator and BkgZoomInterpolator classes are now
+ deprecated. [#2108]
+ * The Background2D bkgrms_estimator keyword argument has been
+ renamed to bkg_rms_estimator. The old name is deprecated.
+ [#2241]
+ ### photutils.centroids
+ * The xpeak, ypeak, and search_boxsize keyword arguments for
+ centroid_quadratic are now deprecated. Use centroid_sources to
+ centroid sources at specific positions. [#2160]
+ ### photutils.datasets
+ * The get_path, load_spitzer_image, load_spitzer_catalog, and
+ load_star_image functions are now deprecated and will be
+ removed in a future version. [#2135]
+ ### photutils.detection
+ * find_peaks now returns a QTable instead of a Table. [#2201]
+ * The sharplo and sharphi keyword arguments for DAOStarFinder and
+ IRAFStarFinder are now deprecated. Use the
+ sharpness_range=(lower, upper) tuple keyword instead. Set
+ sharpness_range=None to disable sharpness filtering. [#2216]
+ * The roundlo and roundhi keyword arguments for DAOStarFinder and
+ IRAFStarFinder are now deprecated. Use the
+ roundness_range=(lower, upper) tuple keyword instead. Set
+ roundness_range=None to disable roundness filtering. [#2216]
+ * The minsep_fwhm keyword argument for IRAFStarFinder is now
+ deprecated. Use min_separation instead. [#2216]
+ * The peakmax keyword argument for DAOStarFinder, IRAFStarFinder,
+ and StarFinder is now deprecated. Use peak_max instead. [#2216]
+ * The brightest keyword argument for DAOStarFinder,
+ IRAFStarFinder, and StarFinder is now deprecated. Use
+ n_brightest instead. [#2216]
+ * The npeaks keyword argument for find_peaks is now deprecated.
+ Use n_peaks instead. [#2241]
+ * The default min_separation for DAOStarFinder, IRAFStarFinder,
+ and StarFinder is now None, which computes a default separation
+ of 2.5 * fwhm (or 2.5 *
+ * (min(kernel.shape) // 2) for StarFinder) consistent across all
+ three star finders. [#2216]
+ * The xcentroid and ycentroid column/attribute names for
+ DAOStarFinder, IRAFStarFinder, and StarFinder catalog classes
+ are deprecated. Use x_centroid and y_centroid instead. The
+ cutout_xcentroid and cutout_ycentroid attributes are also
+ deprecated in favor of cutout_x_centroid and cutout_y_centroid.
+ [#2241]
+ * The IRAFStarFinder and StarFinder pa attribute/column has been
+ renamed to orientation. The old name is deprecated. [#2241]
+ * The npix column/attribute in DAOStarFinder and IRAFStarFinder
+ catalogs has been renamed to n_pixels. The old name is
+ deprecated. [#2241]
+ * The IRAFStarFinder and StarFinder orientation (was pa) values
+ are now always returned as a Quantity array in the range [0,
+ 360) degrees. [#2224, #2225]
+ ### photutils.isophote
+ * The Isophote and IsophoteList grad_error and grad_r_error
+ attributes have been renamed to gradient_err and
+ gradient_rel_err, respectively. The old names are deprecated.
+ [#2241]
+ * The EllipseSample gradient_error and gradient_relative_error
+ attributes have been renamed to gradient_err and
+ gradient_rel_err, respectively. The old names are deprecated.
+ [#2241]
+ * The grad_error and grad_rerror column names in the isophote
+ output table have been renamed to gradient_err and
+ gradient_rel_err, respectively. The old names are deprecated.
+ [#2241]
+ * The nclip parameter in Ellipse.fit_image, Ellipse.fit_isophote,
+ and EllipseSample has been renamed to n_clip. The old name is
+ deprecated. [#2241]
+ * The Isophote and IsophotList niter, ndata, and nflag attributes
+ have been renamed to n_iter, n_data, and n_flag, respectively.
+ The old names are deprecated. [#2241]
+ ### photutils.profiles
+ * Cached Gaussian fits to the radial profile are now
+ automatically invalidated when the profile normalization
+ changes, so the fit is always consistent with the current
+ profile. [#2185]
+ ### photutils.psf
+ * The photutils.psf.matching subpackage has been moved to
+ photutils.psf_matching. Importing from the old location is
+ deprecated. [#2167]
+ * Removed the deprecated IntegratedGaussianPRF and PRFAdapter
+ classes. [#2103]
+ * The grid_from_epsfs helper function is now deprecated. Instead,
+ use GriddedPSFModel directly. [#2111]
+ * The EPSFFitter class is now deprecated. Use the fitter,
+ fit_shape, and fitter_maxiters parameters of EPSFBuilder
++++ 144 more lines (skipped)
++++ between
/work/SRC/openSUSE:Factory/python-photutils/python-photutils.changes
++++ and
/work/SRC/openSUSE:Factory/.python-photutils.new.1937/python-photutils.changes
Old:
----
photutils-2.3.0.tar.gz
New:
----
photutils-3.0.0-cythonbool.patch
photutils-3.0.0.tar.gz
----------(New B)----------
New: renamed to regularization. The old name is deprecated. [#2241]
- Add photutils-3.0.0-cythonbool.patch gh#astropy/photutils#2260
----------(New E)----------
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Other differences:
------------------
++++++ python-photutils.spec ++++++
--- /var/tmp/diff_new_pack.u0D7AO/_old 2026-05-28 17:29:36.038329005 +0200
+++ /var/tmp/diff_new_pack.u0D7AO/_new 2026-05-28 17:29:36.042329172 +0200
@@ -1,7 +1,7 @@
#
# spec file for package python-photutils
#
-# Copyright (c) 2025 SUSE LLC and contributors
+# Copyright (c) 2026 SUSE LLC and contributors
#
# All modifications and additions to the file contributed by third parties
# remain the property of their copyright owners, unless otherwise agreed
@@ -17,42 +17,44 @@
Name: python-photutils
-Version: 2.3.0
+Version: 3.0.0
Release: 0
Summary: An Astropy package for photometry
License: BSD-3-Clause
Group: Productivity/Scientific/Astronomy
URL: https://github.com/astropy/photutils
Source:
https://files.pythonhosted.org/packages/source/p/photutils/photutils-%{version}.tar.gz
+# PATCH-FIX-UPSTREAM photutils-3.0.0-cythonbool.patch gh#astropy/photutils#2260
+Patch0: photutils-3.0.0-cythonbool.patch
BuildRequires: %{python_module Cython >= 3.1 with %python-Cython < 4}
BuildRequires: %{python_module devel >= 3.11}
BuildRequires: %{python_module extension-helpers >= 1.3}
-BuildRequires: %{python_module numpy-devel >= 1.25}
+BuildRequires: %{python_module numpy-devel >= 2}
BuildRequires: %{python_module pip}
BuildRequires: %{python_module setuptools >= 77}
-BuildRequires: %{python_module setuptools_scm >= 8}
+BuildRequires: %{python_module setuptools_scm >= 8.1}
BuildRequires: %{python_module wheel}
BuildRequires: fdupes
BuildRequires: python-rpm-macros
-Requires: python-astropy >= 5.3
-Requires: python-numpy >= 1.25
-Requires: python-scipy >= 1.11.1
-Recommends: python-Bottleneck >= 1.3.6
-Recommends: python-Shapely >= 2
+Requires: python-astropy >= 6.1.4
+Requires: python-numpy >= 2
+Requires: python-scipy >= 1.13
+Recommends: python-Bottleneck >= 1.4
+Recommends: python-Shapely >= 2.0
Recommends: python-gwcs >= 0.20
-Recommends: python-matplotlib >= 3.8
-Recommends: python-rasterio >= 1.3.7
-Recommends: python-scikit-image >= 0.21.0
-Recommends: python-tqdm >= 4.65
+Recommends: python-matplotlib >= 3.9
+Recommends: python-rasterio >= 1.4
+Recommends: python-scikit-image >= 0.23
+Recommends: python-tqdm >= 4.66
# SECTION test requirements
-BuildRequires: %{python_module Bottleneck >= 1.3.6}
-BuildRequires: %{python_module astropy >= 5.3}
+BuildRequires: %{python_module Bottleneck >= 1.4}
+BuildRequires: %{python_module astropy >= 6.1.4}
BuildRequires: %{python_module gwcs >= 0.20}
-BuildRequires: %{python_module matplotlib >= 3.8}
-BuildRequires: %{python_module pytest-astropy >= 0.10}
-BuildRequires: %{python_module pytest-xdist >= 2.5}
-BuildRequires: %{python_module scikit-image >= 0.21.0}
-BuildRequires: %{python_module scipy >= 1.11.1}
+BuildRequires: %{python_module matplotlib >= 3.9}
+BuildRequires: %{python_module pytest-astropy >= 0.11}
+BuildRequires: %{python_module pytest-xdist >= 3.5}
+BuildRequires: %{python_module scikit-image >= 0.23 if %python-base >= 3.12}
+BuildRequires: %{python_module scipy >= 1.13}
# /SECTION
%python_subpackages
@@ -78,7 +80,7 @@
mv photutils.src photutils
%files %{python_files}
-%doc CHANGES.rst photutils/CITATION.rst README.rst
+%doc CHANGES.rst README.rst
%license LICENSE.rst
%{python_sitearch}/photutils
%{python_sitearch}/photutils-%{version}.dist-info
++++++ photutils-3.0.0-cythonbool.patch ++++++
>From 9bfeeef747f205b57f58c76b9b425cb5b9aab236 Mon Sep 17 00:00:00 2001
From: Ole Streicher <[email protected]>
Date: Sat, 18 Apr 2026 13:08:09 +0200
Subject: [PATCH] Changle bool to bint in ellipse_model.pyx
---
CHANGES.rst | 5 +++++
photutils/isophote/ellipse_model.pyx | 3 +--
2 files changed, 6 insertions(+), 2 deletions(-)
diff --git a/CHANGES.rst b/CHANGES.rst
index 2f4c99ba0..262717a23 100644
(omitted)
diff --git a/photutils/isophote/ellipse_model.pyx
b/photutils/isophote/ellipse_model.pyx
index 9013b3559..55552d4ed 100644
--- a/photutils/isophote/ellipse_model.pyx
+++ b/photutils/isophote/ellipse_model.pyx
@@ -19,7 +19,6 @@ cdef extern from "math.h":
double sin(double x)
double sqrt(double x)
-
DTYPE = np.float64
ctypedef cnp.float64_t DTYPE_t
@@ -83,7 +82,7 @@ def build_ellipse_model_c(
cdef double r, sma, q, pa, x0, y0, intens0, intens
cdef int i, j, i_max, j_max
cdef cython.Py_ssize_t index
- cdef bool i_ge_zero, i_p1_le_max
+ cdef bint i_ge_zero, i_p1_le_max
# Define output array
cdef double[:, :] result = np.zeros([n_rows, n_cols], dtype=DTYPE)
++++++ photutils-2.3.0.tar.gz -> photutils-3.0.0.tar.gz ++++++
++++ 79033 lines of diff (skipped)
