Script 'mail_helper' called by obssrc Hello community, here is the log from the commit of package R-base for openSUSE:Factory checked in at 2022-03-16 20:21:30 ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Comparing /work/SRC/openSUSE:Factory/R-base (Old) and /work/SRC/openSUSE:Factory/.R-base.new.25692 (New) ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Package is "R-base" Wed Mar 16 20:21:30 2022 rev:83 rq:962175 version:unknown Changes: -------- --- /work/SRC/openSUSE:Factory/R-base/R-base.changes 2021-11-08 17:25:19.924738535 +0100 +++ /work/SRC/openSUSE:Factory/.R-base.new.25692/R-base.changes 2022-03-16 20:21:46.601026803 +0100 @@ -1,0 +2,81 @@ +Fri Mar 11 07:54:58 UTC 2022 - Detlef Steuer <detlef.ste...@gmx.de> + +- CHANGES IN R 4.1.3: + + NEW FEATURES: + + * The default version of Bioconductor has been changed to 3.14. + (This is used by setRepositories and the menus in GUIs.) + + UTILITIES: + + * R CMD check --as-cran has a workaround for a bug in versions of + file up to at least 5.41 which mis-identify DBF files last + changed in 2022 as executables. + + C-LEVEL FACILITIES: + + * The legacy S-compatibility macros SINGLE_* in R_ext/Constants.h + (included by R.h) are deprecated and will be removed in R 4.2.0. + + BUG FIXES: + + * Initialization of self-starting nls() models with initialization + functions following the pre-R-4.1.0 API (without the ... + argument) works again for now, with a deprecation warning. + + * Fixed quoting of ~autodetect~ in Java setting defaults to avoid + inadvertent user lookup due to leading ~, reported in PR#18231 by + Harold Gutch. + + * substr(., start, stop) <- v now treats _negative_ stop values + correctly. Reported with a patch in PR#18228 by Brodie Gaslam. + + * Subscripting an array x without dimnames by a + length(dim(x))-column character matrix gave "random" non-sense, + now an error; reported in PR#18244 by Mikael Jagan. + + * ...names() now matches names(list(...)) closely, fixing PR#18247. + + * all.equal(*, scale = s) now works as intended when length(s) > 1, + partly thanks to Michael Chirico's PR#18272. + + * print(x) for long vectors x now also works for named atomic + vectors or lists and prints the correct number when reaching the + getOption("max.print") limit; partly thanks to a report and + proposal by Hugh Parsonage to the R-devel list. + + * all.equal(<selfStart>, *) no longer signals a deprecation + warning. + + * reformulate(*, response=r) gives a helpful error message now when + length(r) > 1, thanks to Bill Dunlap's PR#18281. + + * Modifying globalCallingHandlers inside withCallingHandlers() now + works or fails correctly, thanks to Henrik Bengtsson's PR#18257. + + * hist(<Date>, breaks = "days") and hist(<POSIXt>, breaks = "secs") + no longer fail for inputs of length 1. + + * qbeta(.001, .9, .009) and similar cases now converge correctly + thanks to Ben Bolker's report in PR#17746. + + * window(x, start, end) no longer wrongly signals "'start' cannot + be after 'end'", fixing PR#17527 and PR#18291. + + * data() now checks that its (rarely used) list argument is a + character vector - a couple of packages passed other types and + gave incorrect results. + + * which() now checks its arr.ind argument is TRUE rather coercing + to logical and taking the first element - which gave incorrect + results in package code. + + * model.weights() and model.offset() more carefully extract their + model components, thanks to Ben Bolker and Tim Taylor's R-devel + post. + + * list.files(recursive = TRUE) now shows all broken symlinks + (previously, some of them may have been omitted, PR#18296). + +------------------------------------------------------------------- Old: ---- R-4.1.2.tar.bz2 New: ---- R-4.1.3.tar.xz ++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Other differences: ------------------ ++++++ R-base.spec ++++++ --- /var/tmp/diff_new_pack.1vKjRC/_old 2022-03-16 20:21:47.445027410 +0100 +++ /var/tmp/diff_new_pack.1vKjRC/_new 2022-03-16 20:21:47.453027416 +0100 @@ -1,7 +1,7 @@ # # spec file for package R-base # -# Copyright (c) 2021 SUSE LLC +# Copyright (c) 2022 SUSE LLC # # All modifications and additions to the file contributed by third parties # remain the property of their copyright owners, unless otherwise agreed @@ -23,10 +23,10 @@ %define release 1 Name: R-base -Version: 4.1.2 +Version: 4.1.3 Release: %release %define Rversion %{version} -Source0: R-%{version}.tar.bz2 +Source0: R-%{version}.tar.xz Source10: macros.R #Source: http://cran.r-project.org/src/base/R-2/R-%%{version}.tar.gz # PATCH-FIX-UPSTREAM Fix tre when wchar_t is unsigned int @@ -1165,7 +1165,7 @@ %package -n R-class Summary: Package provides recommended R-class -Version: 7.3.19 +Version: 7.3.20 Release: %release Requires: R-base @@ -1252,7 +1252,7 @@ %package -n R-foreign Summary: Package provides recommended R-foreign -Version: 0.8.81 +Version: 0.8.82 Release: %release Requires: R-base @@ -1282,7 +1282,7 @@ %package -n R-KernSmooth Summary: Package provides recommended R-KernSmooth -Version: 2.23.20 +Version: 2.23.30 Release: %release Requires: R-base @@ -1344,7 +1344,7 @@ %package -n R-MASS Summary: Package provides recommended R-MASS -Version: 7.3.54 +Version: 7.3.55 Release: %release Requires: R-base @@ -1377,7 +1377,7 @@ %package -n R-Matrix Summary: Package provides recommended R-Matrix -Version: 1.3.4 +Version: 1.4.0 Release: %release Requires: R-base Obsoletes: R-Matrix-devel <= 1.3.2 @@ -1425,7 +1425,7 @@ %package -n R-mgcv Summary: Package provides recommended R-mgcv -Version: 1.8.38 +Version: 1.8.39 Release: %release Requires: R-base @@ -1456,7 +1456,7 @@ %package -n R-nlme Summary: Package provides recommended R-nlme -Version: 3.1.153 +Version: 3.1.155 Release: %release Requires: R-base @@ -1489,7 +1489,7 @@ %package -n R-nnet Summary: Package provides recommended R-nnet -Version: 7.3.16 +Version: 7.3.17 Release: %release Requires: R-base @@ -1520,7 +1520,7 @@ %package -n R-rpart Summary: Package provides recommended R-rpart -Version: 4.1.15 +Version: 4.1.16 Release: %release Requires: R-base @@ -1552,7 +1552,7 @@ %package -n R-spatial Summary: Package provides recommended R-spatial -Version: 7.3.14 +Version: 7.3.15 Release: %release Requires: R-base