http://git-wip-us.apache.org/repos/asf/airavata/blob/a133fa8c/modules/distribution/gfac-server/src/main/resources/NOTICE ---------------------------------------------------------------------- diff --git a/modules/distribution/gfac-server/src/main/resources/NOTICE b/modules/distribution/gfac-server/src/main/resources/NOTICE new file mode 100644 index 0000000..fa7cba5 --- /dev/null +++ b/modules/distribution/gfac-server/src/main/resources/NOTICE @@ -0,0 +1,163 @@ +Apache Airavata +Copyright 2014 The Apache Software Foundation + +This product includes software developed at +The Apache Software Foundation (http://www.apache.org/). + +=============================================================================== +Apache Xerces Java Notice: + + Portions of this software were originally based on the following: + - software copyright (c) 1999, IBM Corporation., http://www.ibm.com. + - software copyright (c) 1999, Sun Microsystems., http://www.sun.com. + - voluntary contributions made by Paul Eng on behalf of the + Apache Software Foundation that were originally developed at iClick, Inc., + software copyright (c) 1999. + +================================================================================ +Apache XmlBeans Notice: + + Portions of this software were originally based on the following: + - software copyright (c) 2000-2003, BEA Systems, <http://www.bea.com/>. + + Aside from contributions to the Apache XMLBeans project, this + software also includes: + + - one or more source files from the Apache Xerces-J and Apache Axis + products, Copyright (c) 1999-2003 Apache Software Foundation + + - W3C XML Schema documents Copyright 2001-2003 (c) World Wide Web + Consortium (Massachusetts Institute of Technology, European Research + Consortium for Informatics and Mathematics, Keio University) + + - resolver.jar from Apache Xml Commons project, + Copyright (c) 2001-2003 Apache Software Foundation + + - Piccolo XML Parser for Java from http://piccolo.sourceforge.net/, + Copyright 2002 Yuval Oren under the terms of the Apache Software License 2.0 + + - JSR-173 Streaming API for XML from http://sourceforge.net/projects/xmlpullparser/, + Copyright 2005 BEA under the terms of the Apache Software License 2.0 + +========================================================================================= +Apache Axis2 Notice: (axis2-*, mex-1.5.1-impl) + +Portions Copyright 2006 International Business Machines Corp. +Portions Copyright 2005-2007 WSO2, Inc. + +This product also includes schemas and specification developed by: +- the W3C consortium (http://www.w3c.org) + +This product also includes WS-* schemas developed by International +Business Machines Corporation, Microsoft Corporation, BEA Systems, +TIBCO Software, SAP AG, Sonic Software, and VeriSign + +This product also includes a WSDL developed by salesforce.com +- Copyright 1999-2006 salesforce.com, inc. +Portions of the included xmlbeans library were originally based on the following: +- software copyright (c) 2000-2003, BEA Systems, <http://www.bea.com/>. + +==================================================================================== +Apache Derby Notice: + +Portions of Derby were originally developed by +International Business Machines Corporation and are +licensed to the Apache Software Foundation under the +"Software Grant and Corporate Contribution License Agreement", +informally known as the "Derby CLA". +The following copyright notice(s) were affixed to portions of the code +with which this file is now or was at one time distributed +and are placed here unaltered. + +(C) Copyright 1997,2004 International Business Machines Corporation. All rights reserved. + +(C) Copyright IBM Corp. 2003. + +======================= + +The portion of the functionTests under 'nist' was originally +developed by the National Institute of Standards and Technology (NIST), +an agency of the United States Department of Commerce, and adapted by +International Business Machines Corporation in accordance with the NIST +Software Acknowledgment and Redistribution document at +http://www.itl.nist.gov/div897/ctg/sql_form.htm + +======================== + +The JDBC apis for small devices and JDBC3 (under java/stubs/jsr169 and +java/stubs/jdbc3) were produced by trimming sources supplied by the +Apache Harmony project. In addition, the Harmony SerialBlob and +SerialClob implementations are used. The following notice covers the Harmony sources: + +Portions of Harmony were originally developed by +Intel Corporation and are licensed to the Apache Software +Foundation under the "Software Grant and Corporate Contribution +License Agreement", informally known as the "Intel Harmony CLA". + +============================================================================= +Apache Woden Notice: + + This product also includes software developed by : + + - IBM Corporation (http://www.ibm.com), + WSDL4J was the initial code contribution for the Apache Woden + project and some of the WSDL4J design and code has been reused. + - The W3C Consortium (http://www.w3c.org), + Common W3C XML Schema and DTD files are packaged with Apache Woden. + + Please read the different LICENSE files present in the root directory of + this distribution. + +========================================================================= +Woodstox Notice: + +This product includes software developed by the Woodstox Project +(http://woodstox.codehaus.org/) + +This product currently only contains code developed by authors +of specific components, as identified by the source code files. + +Since product implements StAX API, it has dependencies to StAX API +classes. + +For additional credits (generally to people who reported problems) +see CREDITS file. + +=========================================================================== +Apache xml-commons xml-apis Notice: + + Portions of this software were originally based on the following: + - software copyright (c) 1999, IBM Corporation., http://www.ibm.com. + - software copyright (c) 1999, Sun Microsystems., http://www.sun.com. + - software copyright (c) 2000 World Wide Web Consortium, http://www.w3.org + +================================================================================================ +Apache Xalan Notice: + +Portions of this software was originally based on the following: + - software copyright (c) 1999-2002, Lotus Development Corporation., http://www.lotus.com. + - software copyright (c) 2001-2002, Sun Microsystems., http://www.sun.com. + - software copyright (c) 2003, IBM Corporation., http://www.ibm.com. + - voluntary contributions made by Ovidiu Predescu (ovi...@cup.hp.com) on behalf of the + Apache Software Foundation and was originally developed at Hewlett Packard Company. +================================================================================================ +Apache OpenJPA Notice: + +OpenJPA includes software developed by the SERP project +Copyright (c) 2002-2006, A. Abram White. All rights reserved. + +OpenJPA includes the persistence and orm schemas from the JPA specifications. +Copyright 2005-2009 Sun Microsystems, Inc. All rights reserved. +OpenJPA elects to include this software in this distribution under the +CDDL license. You can obtain a copy of the License at: + https://glassfish.dev.java.net/public/CDDL+GPL.html +The source code is available at: + https://glassfish.dev.java.net/source/browse/glassfish/ + +OpenJPA includes software written by Miroslav Nachev +OpenJPA uses test code written by Charles Tillman. +================================================================================================ +Apache XmlSchema Notice: + +Portions Copyright 2006 International Business Machines Corp. +================================================================================================
http://git-wip-us.apache.org/repos/asf/airavata/blob/a133fa8c/modules/distribution/gfac-server/src/main/resources/README ---------------------------------------------------------------------- diff --git a/modules/distribution/gfac-server/src/main/resources/README b/modules/distribution/gfac-server/src/main/resources/README new file mode 100644 index 0000000..1539b8c --- /dev/null +++ b/modules/distribution/gfac-server/src/main/resources/README @@ -0,0 +1,121 @@ +Apache Airavata Server - README.txt +Licensed under Apache License 2.0 - http://www.apache.org/licenses/LICENSE-2.0 +-------------------------------------------------------------------------------- + +About +===== +Apache Airavata, a software framework to executing and managing computational jobs on +distributed computing resources including local clusters, supercomputers, national grids, +academic and commercial clouds. Airavata can be used as individual components or +as an integrated solution to build science gateways or general-purpose distributed +application and workflow management systems. Users can use Airavata back end services +and build gadgets to deploy in open social containers such as Apache Rave and modify them +to suit their needs. Airavata builds on general concepts of service oriented computing, +distributed messaging, and workflow composition and orchestration. + +This distribution allows you to run a standalone Airavata Server which includes all the +airavata services shipped with a default derby database as the backend registry. + +Release Notes +============= +0.11 is the tenth release of Airavata (skipped 0.1-INCUBATNG). This release focuses bug fixes and GSISSH library for beta testing. For detailed tasks list, please see RELEASE_NOTES. + +Building from source +==================== +For brief installation instructions, see INSTALL +For detailed installation and further instructions refer http://airavata.apache.org/ - Documentation section in left hand panel. Step by step with proper documentation are provided. + +Known Issues in This Release +============================ +This is the base release and is focused on a good foundation and less on features. This +version is not recommended for production usage. + +Airavata Binary Distribution Directory Structure +================================================ + + AIRAVATA_HOME + âââ bin + â âââ database_scripts <dir> + â âââ airavata-server.bat + â âââ airavata-server.properties + â âââ airavata-server.sh + â âââ authenticators.xml + â âââ axis2.xml + â âââ derby.sh + â âââ host.xml + â âââ log4j.properties + â âââ logo.txt + â âââ setenv.bat + â âââ setenv.sh + â âââ startNetworkServer + âââ lib <dir> + âââ repository + â âââ modules + â âââ services + âââ samples + â âââ workflows <dir> + â âââ echo_out.sh + â âââ echo.sh + âââ INSTALL + âââ LICENSE + âââ NOTICE + âââ README + + +How to test and run samples +=========================== +* If you built Airavata from source, and if you see "BUILD SUCCESS", then the test cases should have passes. +* The test cases are beyond unit level, they startup embedded services and run through basic workflow use cases. +* To walk through Airavata features, follow "Airavata in Five Minutes" tutorial at http://airavata.apache.org/documentation/tutorials/airavata-in-5-minutes.html +* For intermediate level Airavata features, follow "Airavata in Ten Minutes" tutorial at http://airavata.apache.org/documentation/tutorials/airavata-in-10-minutes.html +* For advanced use cases, please contact mailing lists - http://airavata.apache.org/community/mailing-lists.html + +Description of Directory Structure +================================== + - bin + This contains all the configuration files & the executable scripts to run the Airavata Server (Axis2 server + with Airavata services which include messageBroker and messageBox with GFac Axis2 services), & a standalone Apache Derby server. + + - bin - database_scripts + Contains the database scripts which are used to create tables for messagebox and messagebroker services + + - samples + This contains sample workflow to try out & sample application scripts. + + - lib + This contains all the libraries required to run the airavata server and/or derby server. + + - repository - services + Contains deployed services in Axis2 runtime. + + - README + This document. + + - INSTALL + This document will contain information on installing Apache-Airavata. + + +Other Available Distributions +============================= + +Server Distributions +-------------------- +* Airavata Server + The Airavata Server binary distribution allows you to run a standalone Airavata Server which includes all the airavata services + shipped with a default derby database as the backend registry. For stable purposes, a mysql configuration is recommended. + +* Airavata Server Web Application + This is similar package as the Airavata Server but is distributed as the server Web Application archive. + This war is compatible with Apache Tomcat application server. The war bundles all airavata services + enabled by defualt to startup a derby database as the backend registry. For stable purposes, a mysql configuration is recommended. + +Client Distributions +-------------------- +* Airavata XBaya + The Airavata XBaya distribution is a client GUI application with features to register applications as web services, construct workflows, + execute and monitor workflows and browse the generated results from the airavata registry. + +* Airavata XBaya JNLP + The Airavata XBaya JNLP distribution is the simular GUI distribution but prepackeged to be ready to be deployed to + a web server as a web start application. The GUI provides features to register applications as web services, construct workflows, + execute and monitor workflows and browse the generated results from the airavata registry. http://git-wip-us.apache.org/repos/asf/airavata/blob/a133fa8c/modules/distribution/gfac-server/src/main/resources/bin/gfac-server.sh ---------------------------------------------------------------------- diff --git a/modules/distribution/gfac-server/src/main/resources/bin/gfac-server.sh b/modules/distribution/gfac-server/src/main/resources/bin/gfac-server.sh new file mode 100755 index 0000000..839ef4e --- /dev/null +++ b/modules/distribution/gfac-server/src/main/resources/bin/gfac-server.sh @@ -0,0 +1,118 @@ +#!/bin/bash + +# Licensed to the Apache Software Foundation (ASF) under one +# or more contributor license agreements. See the NOTICE file +# distributed with this work for additional information +# regarding copyright ownership. The ASF licenses this file +# to you under the Apache License, Version 2.0 (the +# "License"); you may not use this file except in compliance +# with the License. You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, +# software distributed under the License is distributed on an +# "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY +# KIND, either express or implied. See the License for the +# specific language governing permissions and limitations +# under the License. + +. `dirname $0`/setenv.sh +cd $AIRAVATA_HOME/bin +LOGO_FILE="logo.txt" + +JAVA_OPTS="" +AIRAVATA_COMMAND="" +IS_DAEMON_MODE=false +LOGO=true +STOP=false +FORCE=false +SERVERS="--servers=gfac" +for var in "$@" +do + case $var in + -xdebug) + JAVA_OPTS="$JAVA_OPTS -Xdebug -Xnoagent -Xrunjdwp:transport=dt_socket,server=y,address=8000" + AIRAVATA_COMMAND="$AIRAVATA_COMMAND $SERVERS" + shift + ;; + -security) + JAVA_OPTS="$JAVA_OPTS -Djava.security.manager -Djava.security.policy=$AIRAVATA_HOME/conf/axis2.policy -Daxis2.home=$AIRAVATA_HOME" + shift + ;; + start) + AIRAVATA_COMMAND="$AIRAVATA_COMMAND $SERVERS" + IS_DAEMON_MODE=true + shift + ;; + stop) + LOGO=false + STOP=true + AIRAVATA_COMMAND="$AIRAVATA_COMMAND $var" + shift + ;; + --force) + FORCE=true + shift + ;; + -nologo) + LOGO=false + shift + ;; + -h) + echo "Usage: airavata-server.sh [command-options]" + echo "command options:" + echo " start Start server in daemon mode" + echo " stop [--force] Stop all airavata servers." + echo " --<key>[=<value>] Server setting(s) to override or introduce (overrides values in airavata-server.properties)" + echo " -nologo Do not show airavata logo" + echo " -xdebug Start Airavata Server under JPDA debugger" + echo " -security Enable Java 2 security" + echo " -h Display this help and exit" + shift + exit 0 + ;; + *) + AIRAVATA_COMMAND="$AIRAVATA_COMMAND $SERVERS $var" + shift + esac +done +if $LOGO ; then + if [ -e $LOGO_FILE ] + then + cat $LOGO_FILE + fi +fi +if $STOP && $FORCE ; +then + for f in `find . -name "server-start_*"`; do + f_split=(${f//_/ }); + echo "Found process file : $f" + echo -n " Sending kill signals to process ${f_split[1]}..." + out=`kill -9 ${f_split[1]} 2>&1` + if [ -z "$out" ]; then + echo "done" + else + echo "failed (REASON: $out)" + fi + echo -n " Removing process file..." + out=`rm $f 2>&1` + if [ -z "$out" ]; then + echo "done" + else + echo "failed (REASON: $out)" + fi + done +else + if $IS_DAEMON_MODE ; then + echo "Starting airavata server in daemon mode..." + nohup java $JAVA_OPTS -classpath "$XBAYA_CLASSPATH" \ + -Djava.endorsed.dirs="$AIRAVATA_HOME/lib/endorsed":"$JAVA_HOME/jre/lib/endorsed":"$JAVA_HOME/lib/endorsed" \ + org.apache.airavata.server.ServerMain $AIRAVATA_COMMAND $* > gfac-server.out & + else + java $JAVA_OPTS -classpath "$XBAYA_CLASSPATH" \ + -Djava.endorsed.dirs="$AIRAVATA_HOME/lib/endorsed":"$JAVA_HOME/jre/lib/endorsed":"$JAVA_HOME/lib/endorsed" \ + org.apache.airavata.server.ServerMain $AIRAVATA_COMMAND $* + fi +fi + http://git-wip-us.apache.org/repos/asf/airavata/blob/a133fa8c/modules/distribution/gfac-server/src/main/resources/bin/logo.txt ---------------------------------------------------------------------- diff --git a/modules/distribution/gfac-server/src/main/resources/bin/logo.txt b/modules/distribution/gfac-server/src/main/resources/bin/logo.txt new file mode 100644 index 0000000..e886438 --- /dev/null +++ b/modules/distribution/gfac-server/src/main/resources/bin/logo.txt @@ -0,0 +1,34 @@ +...._....................._..............._...._......................_......... +.../ \..._.__...__._..___| |__...___...../ \..(_)_.__.__.___...____._|.|_.__._.. +../ _ \.| '_ \./ _` |/ __| '_ \./ _ \.../ _ \.| | '__/ _` \ \./ / _` | __/ _` |. +./ ___ \| |_) | (_| | (__| |.| | __/../ ___ \| | |.| (_| |\ V / (_| | || (_| |. +/_/...\_\ .__/.\__,_|\___|_|.|_|\___|./_/...\_\_|_|..\__,_|.\_/.\__,_|\__\__,_|. +........|_|..................................................................... +................................................................................ +................,+????++~..~~++..+????????+??++.++~...~+=???+++................. +..............:???????....:::...~??????????????.~..::...=????????............... +............????????..~~..?????..??????????????.?????..~~~.~???????............. +...........?????????I,~I~~??????.+????????????.~??????~=~..?????????~........... +.........?????++??????..????????:.??????????I..????????..????????+????.......... +........??.....???????....???????...???????+..+??????+.I.????????.....?,........ +........????==????????..??..?????..=???????=..?????,.=+?.?????????===??=........ +......=??????????+????..+??=.???=.~??????????,.???=,???,.????=+??????????....... +....??????????+...+I++..???,=...:??????????????.....+??..++I?+..,??????????..... +....???????=??..........??..+??.:=:.???????......??..??=..........?=???????=.... +....??????..?...........+?..???.....???????......???.??...........~=.??????=.... +....~???~.~..............?..???.~=..,??????...7..???.?.:..............~????:.... +...7....7 ...............?..????. ...??????... .????.?.?.............I ..:.:.... +.....+7=,.+?................????:,I...?????..=.?????.?.............??~.=7+...... +..........????..............??????~...~??..~~??????..?...........+???,.......... +...........???............=.+???????,.?+:.?????????..+...........???+........... +............??............?,.??????.,??..??????????.,............???............ +...........??,.............=.,????.?+....????????I.I..............=?............ +..........I?..................+??.:?~.....=??????..................??........... +..........??...?...............??.:?=......??????..............?...??........... +............++?..............?.????...?....??????.+..............++I............ +.............................?.??????~....???????.?............................. +............................~~.??????......??????............................... +.............................=???????......???????+............................. +..........................=I??++?+++?......?+++++++?+........................... +..........................,..77..77......... .. ...7.......................... +................................................................................ http://git-wip-us.apache.org/repos/asf/airavata/blob/a133fa8c/modules/distribution/orchestrator-server/pom.xml ---------------------------------------------------------------------- diff --git a/modules/distribution/orchestrator-server/pom.xml b/modules/distribution/orchestrator-server/pom.xml new file mode 100644 index 0000000..cb84c69 --- /dev/null +++ b/modules/distribution/orchestrator-server/pom.xml @@ -0,0 +1,325 @@ +<?xml version="1.0" encoding="UTF-8"?> + +<!--Licensed to the Apache Software Foundation (ASF) under one or more contributor + license agreements. See the NOTICE file distributed with this work for additional + information regarding copyright ownership. The ASF licenses this file to + you under the Apache License, Version 2.0 (theà "License"); you may not use + this file except in compliance with the License. You may obtain a copy of + the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required + by applicable law or agreed to in writing, software distributed under the + License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS + OF ANY ~ KIND, either express or implied. See the License for the specific + language governing permissions and limitations under the License. --> + +<project xmlns="http://maven.apache.org/POM/4.0.0"; xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"; + xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/maven-v4_0_0.xsd";> + <parent> + <groupId>org.apache.airavata</groupId> + <artifactId>distribution</artifactId> + <version>0.14-SNAPSHOT</version> + <relativePath>../pom.xml</relativePath> + </parent> + + <modelVersion>4.0.0</modelVersion> + <artifactId>apache-orchestrator-server</artifactId> + <name>Orchestrator server distribution</name> + <packaging>pom</packaging> + <url>http://airavata.apache.org/</url> + + <build> + <plugins> + <plugin> + <groupId>org.apache.maven.plugins</groupId> + <artifactId>maven-dependency-plugin</artifactId> + <version>2.8</version> + <executions> + <execution> + <id>unpack</id> + <phase>compile</phase> + <goals> + <goal>unpack</goal> + </goals> + <configuration> + <artifactItems> + <artifactItem> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-server-configuration</artifactId> + <version>${project.version}</version> + <type>jar</type> + </artifactItem> + </artifactItems> + <!--includes>**/*.war</includes --> + <outputDirectory>${project.build.directory}/conf</outputDirectory> + </configuration> + </execution> + </executions> + </plugin> + + <plugin> + <groupId>org.codehaus.gmaven</groupId> + <artifactId>gmaven-plugin</artifactId> + <version>1.4</version> + <executions> + <execution> + <id>generate-timestamp</id> + <phase>package</phase> + <goals> + <goal>execute</goal> + </goals> + <configuration> + <source> + import java.util.Date + import java.text.MessageFormat + project.properties['buildTimestamp'] = + MessageFormat.format("{0,date,dd-MM-yyyy}", new + Date()) + </source> + </configuration> + </execution> + </executions> + </plugin> + <plugin> + <groupId>org.apache.maven.plugins</groupId> + <artifactId>maven-assembly-plugin</artifactId> + <executions> + <execution> + <id>distribution-package</id> + <phase>package</phase> + <goals> + <goal>single</goal> + </goals> + <configuration> + <finalName>${archieve.name}-${project.version}</finalName> + <descriptors> + <descriptor>src/main/assembly/bin-assembly.xml</descriptor> + <!-- <descriptor>src/main/assembly/src-assembly.xml</descriptor> --> + </descriptors> + <attach>false</attach> + </configuration> + </execution> + </executions> + </plugin> + + <plugin> + <groupId>org.codehaus.mojo</groupId> + <artifactId>build-helper-maven-plugin</artifactId> + <version>1.7</version> + <executions> + <execution> + <id>attach-artifacts</id> + <phase>package</phase> + <goals> + <goal>attach-artifact</goal> + </goals> + <configuration> + <artifacts> + <artifact> + <file>${airavata.bin.zip}</file> + <type>zip</type> + <classifier>bin</classifier> + </artifact> + <artifact> + <file>${airavata.bin.tar.gz}</file> + <type>tar.gz</type> + <classifier>bin</classifier> + </artifact> + </artifacts> + </configuration> + </execution> + </executions> + </plugin> + </plugins> + </build> + + <dependencies> + <dependency> + <groupId>org.apache.derby</groupId> + <artifactId>derby</artifactId> + <version>${derby.version}</version> + </dependency> + <dependency> + <groupId>org.apache.derby</groupId> + <artifactId>derbyclient</artifactId> + <version>${derby.version}</version> + </dependency> + <dependency> + <groupId>org.apache.derby</groupId> + <artifactId>derbynet</artifactId> + <version>${derby.version}</version> + </dependency> + <dependency> + <groupId>org.apache.derby</groupId> + <artifactId>derbytools</artifactId> + <version>${derby.version}</version> + </dependency> + <dependency> + <groupId>org.slf4j</groupId> + <artifactId>slf4j-api</artifactId> + </dependency> + <dependency> + <groupId>org.slf4j</groupId> + <artifactId>jcl-over-slf4j</artifactId> + </dependency> + <dependency> + <groupId>org.slf4j</groupId> + <artifactId>slf4j-log4j12</artifactId> + </dependency> + <dependency> + <groupId>log4j</groupId> + <artifactId>log4j</artifactId> + </dependency> + <dependency> + <groupId>javax.jcr</groupId> + <artifactId>jcr</artifactId> + <version>${jcr.version}</version> + </dependency> + <dependency> + <groupId>commons-collections</groupId> + <artifactId>commons-collections</artifactId> + <version>3.2.1</version> + </dependency> + <dependency> + <groupId>commons-lang</groupId> + <artifactId>commons-lang</artifactId> + <version>2.4</version> + </dependency> + <dependency> + <groupId>commons-io</groupId> + <artifactId>commons-io</artifactId> + <version>2.4</version> + </dependency> + <dependency> + <groupId>commons-codec</groupId> + <artifactId>commons-codec</artifactId> + <version>1.6</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-standalone-server</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>app-catalog-cpi</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-messaging-core</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>app-catalog-data</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-common-utils</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-orchestrator-service</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-orchestrator-core</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-registry-cpi</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-jpa-registry</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-data-models</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-credential-store</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-message-monitor</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-workflow-model-core</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-messenger-commons</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-messenger-client</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-model-utils</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.airavata</groupId> + <artifactId>airavata-workflow-engine</artifactId> + <version>${project.version}</version> + </dependency> + <dependency> + <groupId>org.apache.openjpa</groupId> + <artifactId>openjpa-all</artifactId> + <version>2.2.0</version> + </dependency> + <dependency> + <groupId>com.google.guava</groupId> + <artifactId>guava</artifactId> + <version>12.0</version> + </dependency> + <!-- zookeeper dependencies --> + + <dependency> + <groupId>org.apache.zookeeper</groupId> + <artifactId>zookeeper</artifactId> + <version>3.4.0</version> + </dependency> + <dependency> + <groupId>commons-cli</groupId> + <artifactId>commons-cli</artifactId> + <version>1.2</version> + </dependency> + + <dependency> + <groupId>com.rabbitmq</groupId> + <artifactId>amqp-client</artifactId> + <version>3.2.3</version> + </dependency> + </dependencies> + + + <properties> + <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding> + <archieve.name>apache-orchestrator-server</archieve.name> + <used.axis2.release>${axis2.version}</used.axis2.release> + <airavata.dist.name>${archieve.name}-${project.version}</airavata.dist.name> + <airavata.work.dir>${project.build.directory}/tests/${airavata.dist.name}</airavata.work.dir> + <airavata.bin.zip>${project.build.directory}/${airavata.dist.name}-bin.zip</airavata.bin.zip> + <airavata.bin.tar.gz>${project.build.directory}/${airavata.dist.name}-bin.tar.gz</airavata.bin.tar.gz> + <airavata.webapp.dir>${project.build.directory}/airavata-axis2</airavata.webapp.dir> + <!--airavata.war.dir>${project.build.directory}/test</airavata.war.dir> + <airavata.webapp.war.zip>${project.build.directory}/${airavata.dist.name}.war.zip</airavata.webapp.war.zip> + <airavata.webapp.war.tar.gz>${project.build.directory}/${airavata.dist.name}.war.tar.gz</airavata.webapp.war.tar.gz --> + </properties> +</project> http://git-wip-us.apache.org/repos/asf/airavata/blob/a133fa8c/modules/distribution/orchestrator-server/src/main/assembly/bin-assembly.xml ---------------------------------------------------------------------- diff --git a/modules/distribution/orchestrator-server/src/main/assembly/bin-assembly.xml b/modules/distribution/orchestrator-server/src/main/assembly/bin-assembly.xml new file mode 100644 index 0000000..74bf2c3 --- /dev/null +++ b/modules/distribution/orchestrator-server/src/main/assembly/bin-assembly.xml @@ -0,0 +1,230 @@ +<!--Licensed to the Apache Software Foundation (ASF) under one or more contributor + license agreements. See the NOTICE file distributed with this work for additional + information regarding copyright ownership. The ASF licenses this file to + you under the Apache License, Version 2.0 (theà "License"); you may not use + this file except in compliance with the License. You may obtain a copy of + the License at http://www.apache.org/licenses/LICENSE-2.0 Unless required + by applicable law or agreed to in writing, software distributed under the + License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS + OF ANY ~ KIND, either express or implied. See the License for the specific + language governing permissions and limitations under the License. --> + +<!DOCTYPE assembly [ + <!ELEMENT assembly (id|includeBaseDirectory|baseDirectory|formats|fileSets|dependencySets)*> + <!ELEMENT id (#PCDATA)> + <!ELEMENT includeBaseDirectory (#PCDATA)> + <!ELEMENT baseDirectory (#PCDATA)> + <!ELEMENT formats (format)*> + <!ELEMENT format (#PCDATA)> + <!ELEMENT fileSets (fileSet)*> + <!ELEMENT fileSet (directory|outputDirectory|includes)*> + <!ELEMENT directory (#PCDATA)> + <!ELEMENT outputDirectory (#PCDATA)> + <!ELEMENT includes (include)*> + <!ELEMENT include (#PCDATA)> + <!ELEMENT dependencySets (dependencySet)*> + <!ELEMENT dependencySet (outputDirectory|includes)*> + ]> +<assembly> + <id>bin</id> + <includeBaseDirectory>true</includeBaseDirectory> + <baseDirectory>${archieve.name}-${version}</baseDirectory> + <formats> + <format>tar.gz</format> + <format>zip</format> + </formats> + + <fileSets> + + <!-- ********************** copy release notes files ********************** --> + <fileSet> + <directory>../../../</directory> + <outputDirectory>.</outputDirectory> + <includes> + <include>RELEASE_NOTES</include> + </includes> + </fileSet> + <!-- ********************** copy licenses, readme etc. ********************** --> + <fileSet> + <directory>src/main/resources/</directory> + <outputDirectory>.</outputDirectory> + <includes> + <include>LICENSE</include> + <include>NOTICE</include> + <include>README</include> + <include>INSTALL</include> + </includes> + </fileSet> + + <!-- ********************** copy database scripts ********************** --> + <fileSet> + <directory>../../ws-messenger/messagebroker/src/main/resources/database_scripts + </directory> + <outputDirectory>bin/database_scripts + </outputDirectory> + <includes> + <include>*sql*</include> + </includes> + </fileSet> + <fileSet> + <directory>../../ws-messenger/messagebox/src/main/resources/database_scripts + </directory> + <outputDirectory>bin/database_scripts + </outputDirectory> + <includes> + <include>*sql*</include> + </includes> + </fileSet> + <fileSet> + <directory>../../registry/airavata-jpa-registry/src/main/resources + </directory> + <outputDirectory>bin/database_scripts + </outputDirectory> + <includes> + <include>*sql*</include> + </includes> + </fileSet> + <fileSet> + <directory>../../app-catalog/app-catalog-data/src/main/resources + </directory> + <outputDirectory>bin/database_scripts + </outputDirectory> + <includes> + <include>*sql*</include> + </includes> + </fileSet> + <fileSet> + <directory>src/main/resources/bin</directory> + <outputDirectory>bin</outputDirectory> + <fileMode>777</fileMode> + <includes> + <include>*.sh</include> + <include>*.bat</include> + <include>logo.txt</include> + <include>startNetworkServer</include> + </includes> + </fileSet> + <fileSet> + <directory>${project.build.directory}/conf</directory> + <outputDirectory>bin</outputDirectory> + <includes> + <include>airavata-server.properties</include> + <include>zoo.cfg</include> + <include>registry.properties</include> + <include>log4j.properties</include> + <include>host.xml</include> + <include>persistence.xml</include> + <include>provenance.sql</include> + <include>gfac-config.xml</include> + <include>PBSTemplate.xslt</include> + <include>SLURMTemplate.xslt</include> + <include>SGETemplate.xslt</include> + <include>gsissh.properties</include> + </includes> + </fileSet> + + <!-- ********************** Copy Axis2 startup scripts to stand alone server + ********************** --> + <fileSet> + <directory>src/main/resources/axis2-standalone-bin</directory> + <outputDirectory>bin</outputDirectory> + <fileMode>777</fileMode> + <includes> + <include>*.sh</include> + <include>*.bat</include> + </includes> + </fileSet> + + <fileSet> + <directory>src/main/resources/conf</directory> + <outputDirectory>bin</outputDirectory> + <includes> + <include>**/*</include> + </includes> + </fileSet> + + <!-- ********************** Copy samples ********************** --> + <fileSet> + <directory>${project.build.directory}/samples/applications + </directory> + <outputDirectory>samples</outputDirectory> + <includes> + <include>*.sh</include> + <include>*.bat</include> + </includes> + </fileSet> + + </fileSets> + + <dependencySets> + <dependencySet> + <outputDirectory>lib</outputDirectory> + <outputFileNameMapping>${artifact.artifactId}.${artifact.extension} + </outputFileNameMapping> + <includes> + <include>org.apache.derby:derby:jar</include> + <include>org.apache.derby:derbytools:jar</include> + <include>org.apache.derby:derbynet:jar</include> + <include>org.apache.derby:derbyclient:jar</include> + </includes> + </dependencySet> + <dependencySet> + <outputDirectory>lib</outputDirectory> + <includes> + <include>org.slf4j:slf4j-api:jar</include> + <include>org.slf4j:slf4j-jcl:jar</include> + <include>org.slf4j:slf4j-log4j12:jar</include> + <include>log4j:log4j:jar</include> + <include>javax.jcr:jcr:jar</include> + <include>commons-collections:commons-collections</include> + <include>commons-configuration:commons-configuration</include> + <include>commons-lang:commons-lang</include> + <include>commons-io:commons-io</include> + <include>org.apache.xmlbeans:xmlbeans</include> + <include>org.apache.airavata:airavata-standalone-server:jar + </include> + <include>org.apache.airavata:airavata-common-utils:jar</include> + <include>org.apache.airavata:airavata-orchestrator-service:jar + </include> + <include>org.apache.airavata:airavata-orchestrator-core:jar + </include> + <include>org.apache.airavata:airavata-gfac-schema-utils:jar + </include> + <include>org.apache.airavata:airavata-workflow-execution-context:jar + </include> + <include>org.apache.airavata:airavata-registry-cpi:jar</include> + <include>org.apache.airavata:airavata-jpa-registry:jar</include> + <include>org.apache.airavata:app-catalog-cpi:jar</include> + <include>org.apache.airavata:app-catalog-data:jar</include> + <include>org.apache.airavata:airavata-data-models:jar</include> + <include>org.apache.airavata:airavata-credential-store:jar</include> + <include>org.apache.airavata:airavata-gfac-core:jar</include> + <include>org.apache.airavata:airavata-gfac-stubs:jar</include> + <include>org.apache.airavata:airavata-message-monitor:jar</include> + <include>org.apache.airavata:airavata-workflow-model-core:jar + </include> + <include>org.apache.airavata:airavata-messenger-commons:jar + </include> + <include>org.apache.airavata:airavata-messenger-client:jar</include> + <include>org.apache.airavata:airavata-workflow-engine:jar</include> + <include>org.apache.airavata:airavata-messaging-core:jar</include> + <include>org.apache.airavata:airavata-model-utils:jar</include> + <include>org.apache.airavata:airavata-api-stubs:jar</include> + <include>org.apache.openjpa:openjpa-all:jar</include> + <include>org.bouncycastle:bcprov-jdk15on</include> + <include>javax.servlet:javax.servlet-api</include> + <include>xerces:xercesImpl:jar:2.9.1</include> + <include>com.ibm.icu:icu4j</include> + <include>com.google.guava:guava</include> + <include>org.apache.xmlbeans:xmlbeans</include> + <include>org.apache.thrift:libthrift:jar:0.9.1</include> + <include>commons-cli:commons-cli</include> + <include>commons-codec:commons-codec</include> + <include>com.rabbitmq:amqp-client</include> + <include>org.apache.zookeeper:zookeeper</include> + </includes> + </dependencySet> + + </dependencySets> + +</assembly> http://git-wip-us.apache.org/repos/asf/airavata/blob/a133fa8c/modules/distribution/orchestrator-server/src/main/assembly/src-assembly.xml ---------------------------------------------------------------------- diff --git a/modules/distribution/orchestrator-server/src/main/assembly/src-assembly.xml b/modules/distribution/orchestrator-server/src/main/assembly/src-assembly.xml new file mode 100644 index 0000000..6a093ed --- /dev/null +++ b/modules/distribution/orchestrator-server/src/main/assembly/src-assembly.xml @@ -0,0 +1,75 @@ +<!--Licensed to the Apache Software Foundation (ASF) under one + ~ or more contributor license agreements. See the NOTICE file + ~ distributed with this work for additional information + ~ regarding copyright ownership. The ASF licenses this file + ~ to you under the Apache License, Version 2.0 (the + ~ "License"); you may not use this file except in compliance + ~ with the License. You may obtain a copy of the License at + ~ + ~ http://www.apache.org/licenses/LICENSE-2.0 + ~ + ~ Unless required by applicable law or agreed to in writing, + ~ software distributed under the License is distributed on an + ~ "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + ~ KIND, either express or implied. See the License for the + ~ specific language governing permissions and limitations + ~ under the License. + --> + +<assembly> + <id>src</id> + <includeBaseDirectory>true</includeBaseDirectory> + <baseDirectory>${archieve.name}-${version}</baseDirectory> + <formats> + <format>tar.gz</format> + <format>zip</format> + </formats> + + <fileSets> + <fileSet> + <directory>../..</directory> + <outputDirectory></outputDirectory> + <includes> + <include>NOTICE</include> + <include>LICENSE</include> + <include>README</include> + <include>RELEASE_NOTES</include> + <include>DISCLAIMER</include> + <include>INSTALL</include> + </includes> + <filtered>true</filtered> + </fileSet> + <fileSet> + <directory>../..</directory> + <outputDirectory></outputDirectory> + <useDefaultExcludes>true</useDefaultExcludes> + <includes> + <include>pom.xml</include> + <include>modules/**</include> + <include>samples/**</include> + </includes> + + <excludes> + <!-- Exclusions from org.apache.resources:apache-source-release-assembly-descriptor. + Note that they assume that all sources are located under an "src" directory. This + is not the case for Axis2, which doesn't use the standard Maven 2 conventions. + Thus we may still encounter some issues here. --> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/).*${project.build.directory}.*]</exclude> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?maven-eclipse\.xml]</exclude> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?\.project]</exclude> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?\.classpath]</exclude> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?[^/]*\.iws]</exclude> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?[^/]*\.ipr]</exclude> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?[^/]*\.iml]</exclude> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?\.settings(/.*)?]</exclude> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?\.externalToolBuilders(/.*)?]</exclude> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?\.deployables(/.*)?]</exclude> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?\.wtpmodules(/.*)?]</exclude> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?cobertura\.ser]</exclude> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?pom\.xml\.releaseBackup]</exclude> + <exclude>%regex[(?!((?!${project.build.directory}/)[^/]+/)*src/)(.*/)?release\.properties]</exclude> + </excludes> + + </fileSet> + </fileSets> +</assembly> http://git-wip-us.apache.org/repos/asf/airavata/blob/a133fa8c/modules/distribution/orchestrator-server/src/main/resources/INSTALL ---------------------------------------------------------------------- diff --git a/modules/distribution/orchestrator-server/src/main/resources/INSTALL b/modules/distribution/orchestrator-server/src/main/resources/INSTALL new file mode 100644 index 0000000..0324e61 --- /dev/null +++ b/modules/distribution/orchestrator-server/src/main/resources/INSTALL @@ -0,0 +1,55 @@ +Installing Apache Airavata 0.11 +------------------------------- + +Prerequisites +------------- +Java 1.5 or later +Maven (tested on v 3.0.2) + +Build Apache Airavata from Source +--------------------------------- +* Unzip/untar the source file or check out from svn. +* cd to project folder and type + $ mvn clean install + Note: in order to skip tests use the command + $ mvn clean install -Dmaven.test.skip=true +* The compressed binary distribution is created at <PROJECT DIR>/modules/distribution/airavata-server/target/apache-airavata-server-<airavata-version>-bin.zip + +Installing the Airavata Server +------------------------------ +No installation is necessary. Just extract the compressed distribution. +Note: For customizing the default configurations of the Airavata Server please + refer to Airavata web-site (http://airavata.apache.org/) and/or Airavata + mailing lists (http://airavata.apache.org/community/mailing-lists.html) + +Starting Apache Airavata Server +------------------------------- +* Navigate to <AIRAVATA_HOME>/bin +* type for following command to start the Airavata Server + MAC/Unix systems + $ sh airavata-server.sh + Windows + > airavata-server.bat + Note: Pass "-h" as parameters to see more options when starting the server + +Starting Apache Derby Server +------------------------------- +Users have the option to star the derby server separately +* Navigate to <AIRAVATA_HOME>/bin +* type for following command to start the Airavata Server + MAC/Unix systems + $ sh derby.sh + Windows + <Not supported in this version> + Note: Pass "-h" as parameters to see more options when starting the server + +Running Tests +------------- +Once the binary is unzipped, instructions to run the tests should be followed from README + +Tutorials +---------- +The airavata website has instructions for basic tutorials: +* For basic understanding of how Airavata works - http://airavata.apache.org/documentation/tutorials/airavata-in-5-minutes.html +* Describing and executing applications using Airavata - http://airavata.apache.org/documentation/tutorials/airavata-in-10-minutes.html +* Advanced tutorial to provide understanding of how to run sample workflows distributed with Airavata - http://airavata.apache.org/documentation/tutorials/advanced-workflow-samples.html
