http://git-wip-us.apache.org/repos/asf/airavata-php-gateway/blob/2fbd9289/app/libraries/Utilities.php
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diff --git a/app/libraries/Utilities.php b/app/libraries/Utilities.php
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index cdceb25..0000000
--- a/app/libraries/Utilities.php
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@@ -1,2145 +0,0 @@
-<?php
-
-//Airavata classes - loaded from app/libraries/Airavata
-use Airavata\API\Error\InvalidRequestException;
-use Airavata\API\Error\AiravataClientException;
-use Airavata\API\Error\AiravataSystemException;
-use Airavata\API\Error\ExperimentNotFoundException;
-use Airavata\Model\Workspace\Experiment\ComputationalResourceScheduling;
-use Airavata\Model\AppCatalog\AppInterface\InputDataObjectType;
-use Airavata\Model\Workspace\Experiment\UserConfigurationData;
-use Airavata\Model\Workspace\Experiment\AdvancedOutputDataHandling;
-use Airavata\Model\Workspace\Experiment\Experiment;
-use Airavata\Model\Workspace\Experiment\ExperimentState;
-use Airavata\Model\AppCatalog\AppInterface\DataType;
-use Airavata\Model\Workspace\Project;
-use Airavata\Model\Workspace\Experiment\JobState;
-
-
-
-class Utilities{
-/**
- * Basic utility functions
- */
-
-/*
-
-************* IMPORTANT ************
-
-READ :: ALL CONSTANTS ARE NOW BEING CALLED FROM app/models/Constant.php. 
-
-************* IMPORTANT ************
-*/
-private $tokenFilePath = 'tokens.xml';
-private $tokenFile = null;
-
-private $sshUser;
-private $hostName;
-private static $pathConstant;
-private static $experimentPath;
-private static $experimentDataPathAbsolute;
-
-function __construct(){
-       $this->sshUser = "root";
-       $this->hostName = $_SERVER['SERVER_NAME'];
-
-    self::$experimentDataPathAbsolute = base_path() . 
Constant::EXPERIMENT_DATA_ROOT;
-       self::$pathConstant = 'file://'.$this->sshUser.'@'.$this->hostName.':' 
. self::$experimentDataPathAbsolute;
-       self::$experimentPath = null;
-}
-
-/**
- * Print success message
- * @param $message
- */
-public static function print_success_message($message)
-{
-    echo '<div class="alert alert-success">' . $message . '</div>';
-}
-
-/**
- * Print warning message
- * @param $message
- */
-public static function print_warning_message($message)
-{
-    echo '<div class="alert alert-warning">' . $message . '</div>';
-}
-
-/**
- * Print error message
- * @param $message
- */
-public static function print_error_message($message)
-{
-    echo '<div class="alert alert-danger">' . $message . '</div>';
-}
-
-/**
- * Print info message
- * @param $message
- */
-public static function print_info_message($message)
-{
-    echo '<div class="alert alert-info">' . $message . '</div>';
-}
-
-/**
- * Redirect to the given url
- * @param $url
- */
-public static function redirect($url)
-{
-    echo '<meta http-equiv="Refresh" content="0; URL=' . $url . '">';
-}
-
-/**
- * Return true if the form has been submitted
- * @return bool
- */
-public static function form_submitted()
-{
-    return isset($_POST['Submit']);
-}
-
-/**
- * Store username in session variables
- * @param $username
- */
-public static function store_id_in_session($username)
-{
-    Session::put('username', $username );
-    Session::put('loggedin', true);
-}
-
-/**
- * Return true if the username stored in the session
- * @return bool
- */
-public static function id_in_session()
-{
-    if( Session::has("username") && Session::has('loggedin') )
-        return true;
-    else
-        return false;
-}
-
-/**
- * Verify if the user is already logged in. If not, redirect to the home page.
- */
-public static function verify_login()
-{
-    if (Utilities::id_in_session())
-    {
-        return true;
-    }
-    else
-    {
-        Utilities::print_error_message('User is not logged in!');
-        return false;
-    }
-}
-
-/**
- * Launch the experiment with the given ID
- * @param $expId
- */
-public static function launch_experiment($expId)
-{
-    //global $tokenFilePath;
-    try
-    {
-        /* temporarily using hard-coded token
-        open_tokens_file($tokenFilePath);
-
-        $communityToken = $tokenFile->tokenId;
-
-
-        $token = isset($_SESSION['tokenId'])? $_SESSION['tokenId'] : 
$communityToken;
-
-        $airavataclient->launchExperiment($expId, $token);
-
-        $tokenString = isset($_SESSION['tokenId'])? 'personal' : 'community';
-
-        Utilities::print_success_message('Experiment launched using ' . 
$tokenString . ' allocation!');
-        */
-
-        $hardCodedToken = 
Config::get('pga_config.airavata')['credential-store-token'];
-        Airavata::launchExperiment($expId, $hardCodedToken);
-
-        /*
-        Utilities::print_success_message('Experiment launched!');
-        Utilities::print_success_message("<p>Experiment launched!</p>" .
-            '<p>You will be redirected to the summary page shortly, or you can
-            <a href="experiment_summary.php?expId=' . $expId . '">go 
directly</a> to the experiment summary page.</p>');
-        redirect('experiment_summary.php?expId=' . $expId);
-        */
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('<p>There was a problem launching the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>InvalidRequestException: ' . $ire->getMessage() . '</p>');
-    }
-    catch (ExperimentNotFoundException $enf)
-    {
-        Utilities::print_error_message('<p>There was a problem launching the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>ExperimentNotFoundException: ' . $enf->getMessage() . '</p>');
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('<p>There was a problem launching the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>AiravataClientException: ' . $ace->getMessage() . '</p>');
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('<p>There was a problem launching the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>AiravataSystemException: ' . $ase->getMessage() . '</p>');
-    }
-    catch (Exception $e)
-    {
-        Utilities::print_error_message('<p>There was a problem launching the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Exception: ' . $e->getMessage() . '</p>');
-    }
-}
-
-/**
- * Get all projects owned by the given user
- * @param $username
- * @return null
- */
-public static function get_all_user_projects($gatewayId, $username)
-{
-    $userProjects = null;
-
-    try
-    {
-        $userProjects = Airavata::getAllUserProjects($gatewayId, $username);
-        //var_dump( $userProjects); exit;
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
user\'s projects.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>InvalidRequestException: ' . $ire->getMessage(). '</p>');
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
user\'s projects.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Airavata Client Exception: ' . $ace->getMessage(). '</p>');
-    }
-    catch (AiravataSystemException $ase)
-    {
-        if ($ase->airavataErrorType == 2) // 2 = INTERNAL_ERROR
-        {
-            Utilities::print_warning_message('<p>You must create a project 
before you can create an experiment.
-                Click <a href="' . URL::to('/') . '/project/create">here</a> 
to create a project.</p>');
-        }
-        else
-        {
-            Utilities::print_error_message('<p>There was a problem getting the 
user\'s projects.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>AiravataSystemException: ' . $ase->getMessage() . '</p>');
-        }
-    }
-
-    return $userProjects;
-}
-
-
-/**
- * Get all available applications
- * @return null
- */
-public static function get_all_applications()
-{
-    $applications = null;
-
-    try
-    {
-        $applications = Airavata::getAllApplicationInterfaceNames( 
Session::get("gateway_id"));
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('<p>There was a problem getting all 
applications.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>InvalidRequestException: ' . $ire->getMessage() . '</p>');
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('<p>There was a problem getting all 
applications.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Airavata Client Exception: ' . $ace->getMessage() . '</p>');
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_warning_message('<p>You must create an application 
module, interface and deployment space before you can create an experiment.
-                Click <a href="' . URL::to('/') . '/app/module">here</a> to 
create an application.</p>');
-        /*
-        Utilities::print_error_message('<p>There was a problem getting all 
applications.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Airavata System Exception: ' . $ase->getMessage() . '</p>');
-            */
-    }
-
-    if( count( $applications) == 0)
-        Utilities::print_warning_message('<p>You must create an application 
module, interface and deployment space before you can create an experiment.
-                Click <a href="' . URL::to('/') . '/app/module">here</a> to 
create an application.</p>');
-        
-
-    return $applications;
-}
-
-
-/**
- * Get the interface for the application with the given ID
- * @param $id
- * @return null
- */
-public static function get_application_interface($id)
-{
-    $applicationInterface = null;
-
-    try
-    {
-        $applicationInterface = Airavata::getApplicationInterface($id);
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
application interface.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>InvalidRequestException: ' . $ire->getMessage(). '</p>');
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
application interface.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Airavata Client Exception: ' . $ace->getMessage() . '</p>');
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
application interface.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Airavata System Exception: ' . $ase->getMessage() . '</p>');
-    }
-
-    return $applicationInterface;
-}
-
-
-/**
- * Get a list of compute resources available for the given application ID
- * @param $id
- * @return null
- */
-public static function get_available_app_interface_compute_resources($id)
-{
-    $computeResources = null;
-
-    try
-    {
-        $computeResources = 
Airavata::getAvailableAppInterfaceComputeResources($id);
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('<p>There was a problem getting compute 
resources.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>InvalidRequestException: ' . $ire->getMessage() . '</p>');
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('<p>There was a problem getting compute 
resources.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Airavata Client Exception: ' . $ace->getMessage() . '</p>');
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('<p>There was a problem getting compute 
resources.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Airavata System Exception: ' . $ase->getMessage() . '</p>');
-    }
-
-    return $computeResources;
-}
-
-
-/**
- * Get the ComputeResourceDescription with the given ID
- * @param $id
- * @return null
- */
-public static function get_compute_resource($id)
-{
-    $computeResource = null;
-
-    try
-    {
-        $computeResource = Airavata::getComputeResource($id);
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
compute resource.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>InvalidRequestException: ' . $ire->getMessage() . '</p>');
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
compute resource.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Airavata Client Exception: ' . $ace->getMessage() . '</p>');
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
compute resource.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Airavata System Exception: ' . $ase->getMessage() . '</p>');
-    }
-
-    return $computeResource;
-}
-
-
-/**
- * List the experiment's input files
- * @param $experiment
- */
-public static function list_input_files($experiment)
-{
-    $applicationInputs = 
Utilities::get_application_inputs($experiment->applicationId);
-
-    $experimentInputs = $experiment->experimentInputs;
-
-
-    //showing experiment inputs in the order defined by the admins.
-    $order = array();
-    foreach ($experimentInputs as $index => $input)
-    {
-        $order[$index] = $input->inputOrder;
-    }
-    array_multisort($order, SORT_ASC, $experimentInputs);
-    
-    foreach ($experimentInputs as $input)
-    {
-        $matchingAppInput = null;
-
-        foreach($applicationInputs as $applicationInput)
-        {
-            if ($input->name == $applicationInput->name)
-            {
-                $matchingAppInput = $applicationInput;
-            }
-        }
-        //var_dump($matchingAppInput);
-
-        if ($matchingAppInput->type == DataType::URI)
-        {
-            $explode = explode('/', $input->value);
-            echo '<p><a target="_blank"
-                        href="' . URL::to("/") . "/../../" . 
Constant::EXPERIMENT_DATA_ROOT . $explode[sizeof($explode)-2] . '/' . 
$explode[sizeof($explode)-1] . '">' .
-                $explode[sizeof($explode)-1] . '
-                <span class="glyphicon glyphicon-new-window"></span></a></p>';
-        }
-        elseif ($matchingAppInput->type == DataType::STRING)
-        {
-            echo '<p>' . $input->name . ': ' . $input->value . '</p>';
-        }
-    }
-}
-
-
-/**
- * Get a list of the inputs for the application with the given ID
- * @param $id
- * @return null
- */
-public static function get_application_inputs($id)
-{
-    $inputs = null;
-
-    try
-    {
-        $inputs = Airavata::getApplicationInputs($id);
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('<p>There was a problem getting 
application inputs.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>InvalidRequestException: ' . $ire->getMessage() . '</p>');
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('<p>There was a problem getting 
application inputs.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Airavata Client Exception: ' . $ace->getMessage() . '</p>');
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('<p>There was a problem getting 
application inputs.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Airavata System Exception: ' . $ase->getMessage() . '</p>');
-    }
-
-    return $inputs;
-}
-
-
-/**
- * Get a list of the outputs for the application with the given ID
- * @param $id
- * @return null
- */
-public static function get_application_outputs($id)
-{
-    $outputs = null;
-
-    try
-    {
-        $outputs = Airavata::getApplicationOutputs($id);
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('<p>There was a problem getting 
application outputs.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>InvalidRequestException: ' . $ire->getMessage() . '</p>');
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('<p>There was a problem getting 
application outputs.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Airavata Client Exception: ' . $ace->getMessage() . '</p>');
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('<p>There was a problem getting 
application outputs.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Airavata System Exception: ' . $ase->getMessage() . '</p>');
-    }
-
-    return $outputs;
-}
-
-
-/**
- * Get the experiment with the given ID
- * @param $expId
- * @return null
- */
-public static function get_experiment($expId)
-{
-
-    try
-    {
-        return Airavata::getExperiment($expId);
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>InvalidRequestException: ' . $ire->getMessage() . '</p>');
-    }
-    catch (ExperimentNotFoundException $enf)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>ExperimentNotFoundException: ' . $enf->getMessage() . '</p>');
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>AiravataClientException: ' . $ace->getMessage() . '</p>');
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>AiravataSystemException: ' . $ase->getMessage() . '</p>');
-    }
-    catch (TTransportException $tte)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>TTransportException: ' . $tte->getMessage() . '</p>');
-    }
-    catch (Exception $e)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Exception: ' . $e->getMessage() . '</p>');
-    }
-
-}
-
-/**
- * Get the project with the given ID
- * @param $projectId
- * @return null
- */
-public static function get_project($projectId)
-{
-
-    try
-    {
-        return Airavata::getProject($projectId);
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
project.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>InvalidRequestException: ' . $ire->getMessage() . '</p>');
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
project.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>AiravataClientException: ' . $ace->getMessage() . '</p>');
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('<p>There was a problem getting the 
project.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>AiravataSystemException!<br><br>' . $ase->getMessage() . 
'</p>');
-    }
-
-}
-
-
-/**
- * Create and configure a new Experiment
- * @return Experiment
- */
-public static function assemble_experiment()
-{
-    $utility = new Utilities();
-    $experimentInputs = array();
-
-    $scheduling = new ComputationalResourceScheduling();
-    $scheduling->totalCPUCount = $_POST['cpu-count'];
-    $scheduling->nodeCount = $_POST['node-count'];
-    $scheduling->queueName = $_POST['queue-name'];
-    $scheduling->wallTimeLimit = $_POST['wall-time'];    
-    $scheduling->totalPhysicalMemory = $_POST['total-physical-memory'];
-    $scheduling->resourceHostId = $_POST['compute-resource'];
-
-    $userConfigData = new UserConfigurationData();
-    $userConfigData->computationalResourceScheduling = $scheduling;
-    if( isset( $_POST["userDN"]) )
-    {        
-        $userConfigData->generateCert = 1;
-        $userConfigData->userDN = $_POST["userDN"];
-    }
-
-    $applicationInputs = 
Utilities::get_application_inputs($_POST['application']);
-    $experimentInputs = Utilities::process_inputs($applicationInputs, 
$experimentInputs);
-
-    if( Utilities::$experimentPath == null){
-        Utilities::create_experiment_folder_path();
-    }
-
-    $advHandling = new AdvancedOutputDataHandling();
-
-    $advHandling->outputDataDir = str_replace( base_path() . 
Constant::EXPERIMENT_DATA_ROOT, Utilities::$pathConstant , 
Utilities::$experimentPath);
-    $userConfigData->advanceOutputDataHandling = $advHandling;
-
-    //TODO: replace constructor with a call to airvata to get a prepopulated 
experiment template
-    $experiment = new Experiment();
-
-    // required
-    $experiment->projectID = $_POST['project'];
-    $experiment->userName = Session::get( 'username');
-    $experiment->name = $_POST['experiment-name'];
-
-    // optional
-    $experiment->description = $_POST['experiment-description'];
-    $experiment->applicationId = $_POST['application'];
-    $experiment->userConfigurationData = $userConfigData;
-    $experiment->experimentInputs = $experimentInputs;
-    if( isset( $_POST["enableEmailNotification"]))
-    {
-        $experiment->enableEmailNotification = intval( 
$_POST["enableEmailNotification"] );
-        $experiment->emailAddresses = array_unique( array_filter( 
$_POST["emailAddresses"], "trim") );
-    }
-
-    // adding default experiment outputs for now till prepoulated experiment 
template is not implemented.
-    $experiment->experimentOutputs = Utilities::get_application_outputs( 
$_POST["application"]);
-
-    if ($experimentInputs)
-    {
-        return $experiment;
-    }
-}
-
-/**
- * @param $applicationInputs
- * @param $experimentInputs
- * @internal param $environmentPath
- * @return array
- */
-public static function process_inputs($applicationInputs, $experimentInputs)
-{
-    $utility = new Utilities();
-    $experimentAssemblySuccessful = true;
-    $newExperimentInputs = array();
-
-    //var_dump($_FILES);
-
-    if (sizeof($_FILES) > 0)
-    {
-        if (Utilities::file_upload_successful())
-        {
-            // construct unique path
-            Utilities::create_experiment_folder_path();
-        }
-        else
-        {
-            $experimentAssemblySuccessful = false;
-        }
-    }
-
-    //sending application inputs in the order defined by the admins.
-    $order = array();
-    foreach ($applicationInputs as $index => $input)
-    {
-        $order[$index] = $input->inputOrder;
-    }
-    array_multisort($order, SORT_ASC, $applicationInputs);
-    
-    foreach ($applicationInputs as $applicationInput)
-    {
-        $experimentInput = new InputDataObjectType();
-        $experimentInput = $applicationInput;
-        //$experimentInput->name = $applicationInput->name;
-        //$experimentInput->metaData = $applicationInput->metaData;
-
-
-        //$experimentInput->type = $applicationInput->type;
-        //$experimentInput->type = DataType::STRING;
-
-
-        if(($applicationInput->type == DataType::STRING) ||
-            ($applicationInput->type == DataType::INTEGER) ||
-            ($applicationInput->type == DataType::FLOAT))
-        {
-            if (isset($_POST[$applicationInput->name]) && 
(trim($_POST[$applicationInput->name]) != ''))
-            {
-                $experimentInput->value = $_POST[$applicationInput->name];
-                $experimentInput->type = $applicationInput->type;
-
-            }
-            else // use previous value
-            {
-                $index = -1;
-                for ($i = 0; $i < sizeof($experimentInputs); $i++)
-                {
-                    if ($experimentInputs[$i]->name == $applicationInput->name)
-                    {
-                        $index = $i;
-                    }
-                }
-
-                if ($index >= 0)
-                {
-                    $experimentInput->value = $experimentInputs[$index]->value;
-                    $experimentInput->type = $applicationInput->type;
-                }
-            }
-        }
-        elseif ($applicationInput->type == DataType::URI)
-        {
-            //var_dump($_FILES[$applicationInput->name]->name);
-            if ($_FILES[$applicationInput->name]['name'])
-            {
-                $file = $_FILES[$applicationInput->name];
-
-
-                //
-                // move file to experiment data directory
-                //
-                $filePath = Utilities::$experimentPath . $file['name'];
-
-                // check if file already exists
-                if (is_file($filePath))
-                {
-                    unlink($filePath);
-
-                    Utilities::print_warning_message('Uploaded file already 
exists! Overwriting...');
-                }
-
-                $moveFile = move_uploaded_file($file['tmp_name'], $filePath);
-
-                if ($moveFile)
-                {
-                    Utilities::print_success_message('Upload: ' . 
$file['name'] . '<br>' .
-                        'Type: ' . $file['type'] . '<br>' .
-                        'Size: ' . ($file['size']/1024) . ' kB');//<br>' .
-                        //'Stored in: ' . $experimentPath . $file['name']);
-                }
-                else
-                {
-                    Utilities::print_error_message('<p>Error moving uploaded 
file ' . $file['name'] . '!
-                    Please try again later or report a bug using the link in 
the Help menu.</p>');
-                    $experimentAssemblySuccessful = false;
-                }
-
-                $experimentInput->value = str_replace(base_path() . 
Constant::EXPERIMENT_DATA_ROOT, Utilities::$pathConstant , $filePath);
-                $experimentInput->type = $applicationInput->type;
-                
-            }
-            else
-            {
-                $index = -1;
-                for ($i = 0; $i < sizeof($experimentInputs); $i++)
-                {
-                    if ($experimentInputs[$i]->name == $applicationInput->name)
-                    {
-                        $index = $i;
-                    }
-                }
-
-                if ($index >= 0)
-                {
-                    $experimentInput->value = $experimentInputs[$index]->value;
-                    $experimentInput->type = $applicationInput->type;
-                }
-            }
-
-        }
-        else
-        {
-            Utilities::print_error_message('I cannot accept this input type 
yet!');
-        }
-
-
-
-
-
-
-
-        //$experimentInputs[] = $experimentInput;
-        /*
-        $index = -1;
-        for ($i = 0; $i < sizeof($experimentInputs); $i++)
-        {
-            if ($experimentInputs[$i]->key == $experimentInput->key)
-            {
-                $index = $i;
-            }
-        }
-
-        if ($index >= 0)
-        {
-            unset($experimentInputs[$index]);
-        }
-        */
-        //$experimentInputs[] = $experimentInput;
-
-
-
-
-
-        $newExperimentInputs[] = $experimentInput;
-
-
-    }
-
-    if ($experimentAssemblySuccessful)
-    {
-        return $newExperimentInputs;
-    }
-    else
-    {
-        return false;
-    }
-
-}
-
-
-public static function create_experiment_folder_path()
-{
-    do
-    {
-        Utilities::$experimentPath = base_path() . 
Constant::EXPERIMENT_DATA_ROOT . str_replace(' ', '', Session::get('username') 
) . md5(rand() * time()) . '/';
-    }
-    while (is_dir( Utilities::$experimentPath)); // if dir already exists, try 
again
-    // create upload directory
-    if (!mkdir( Utilities::$experimentPath))
-    {
-        Utilities::print_error_message('<p>Error creating upload directory!
-            Please try again later or report a bug using the link in the Help 
menu.</p>');
-        $experimentAssemblySuccessful = false;
-    }
-}
-
-/**
- * Check the uploaded files for errors
- */
-public static function file_upload_successful()
-{
-    $uploadSuccessful = true;
-
-    foreach ($_FILES as $file)
-    {
-        //var_dump($file);
-        if($file['name'])
-        {
-            if ($file['error'] > 0)
-            {
-                $uploadSuccessful = false;
-                Utilities::print_error_message('<p>Error uploading file ' . 
$file['name'] . ' !
-                    Please try again later or report a bug using the link in 
the Help menu.');
-            }/*
-            elseif ($file['type'] != 'text/plain')
-            {
-                $uploadSuccessful = false;
-                Utilities::print_error_message('Uploaded file ' . 
$file['name'] . ' type not supported!');
-            }
-            elseif (($file['size'] / 1024) > 20)
-            {
-                $uploadSuccessful = false;
-                Utilities::print_error_message('Uploaded file ' . 
$file['name'] . ' must be smaller than 10 MB!');
-            }*/
-        }
-
-
-    }
-
-    return $uploadSuccessful;
-}
-
-
-/**
- * Update the experiment with the given ID
- * @param $expId
- * @param $updatedExperiment
- */
-public static function update_experiment($expId, $updatedExperiment)
-{
-    try
-    {
-        Airavata::updateExperiment($expId, $updatedExperiment);
-
-        /*
-        Utilities::print_success_message("<p>Experiment updated!</p>" .
-            '<p>Click
-            <a href="' . URL::to('/') . '/experiment/summary?expId=' . $expId 
. '">here</a> to visit the experiment summary page.</p>');
-        */
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('<p>There was a problem updating the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>InvalidRequestException: ' . $ire->getMessage() . '</p>');
-    }
-    catch (ExperimentNotFoundException $enf)
-    {
-        Utilities::print_error_message('<p>There was a problem updating the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>ExperimentNotFoundException: ' . $enf->getMessage() . '</p>');
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('<p>There was a problem updating the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>AiravataClientException: ' . $ace->getMessage() . '</p>');
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('<p>There was a problem updating the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>AiravataSystemException: ' . $ase->getMessage() . '</p>');
-    }
-
-}
-
-
-/**
- * Clone the experiment with the given ID
- * @param $expId
- */
-public static function clone_experiment($expId)
-{
-    try
-    {
-        //create new experiment to receive the clone
-        $experiment = Airavata::getExperiment($expId);
-
-        $cloneId = Airavata::cloneExperiment($expId, 'Clone of ' . 
$experiment->name);
-
-        Utilities::print_success_message("<p>Experiment cloned!</p>" .
-            '<p>You will be redirected to the edit page shortly, or you can
-            <a href="edit_experiment.php?expId=' . $cloneId . '">go 
directly</a> to the edit experiment page.</p>');
-        //redirect('edit_experiment.php?expId=' . $cloneId);
-        return $cloneId;
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('<p>There was a problem cloning the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>InvalidRequestException: ' . $ire->getMessage() . '</p>');
-    }
-    catch (ExperimentNotFoundException $enf)
-    {
-        Utilities::print_error_message('<p>There was a problem cloning the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>ExperimentNotFoundException: ' . $enf->getMessage() . '</p>');
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('<p>There was a problem cloning the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>AiravataClientException: ' . $ace->getMessage() . '</p>');
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('<p>There was a problem cloning the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>AiravataSystemException: ' . $ase->getMessage() . '</p>');
-    }
-    catch (TTransportException $tte)
-    {
-        Utilities::print_error_message('<p>There was a problem cloning the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>TTransportException: ' . $tte->getMessage() . '</p>');
-    }
-}
-
-/**
- * Cancel the experiment with the given ID
- * @param $expId
- */
-public static function cancel_experiment($expId)
-{
-
-    try
-    {
-        Airavata::terminateExperiment($expId, 
Config::get('pga_config.airavata')["credential-store-token"]);
-
-        Utilities::print_success_message("Experiment canceled!");
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('<p>There was a problem canceling the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>InvalidRequestException: ' . $ire->getMessage() . '</p>');
-    }
-    catch (ExperimentNotFoundException $enf)
-    {
-        Utilities::print_error_message('<p>There was a problem canceling the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>ExperimentNotFoundException: ' . $enf->getMessage() . '</p>');
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('<p>There was a problem canceling the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>AiravataClientException: ' . $ace->getMessage() . '</p>');
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('<p>There was a problem canceling the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>AiravataSystemException: ' . $ase->getMessage() . '</p>');
-    }
-    catch (TTransportException $tte)
-    {
-        Utilities::print_error_message('<p>There was a problem canceling the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>TTransportException: ' . $tte->getMessage() . '</p>');
-    }
-    catch (Exception $e)
-    {
-        Utilities::print_error_message('<p>There was a problem canceling the 
experiment.
-            Please try again later or submit a bug report using the link in 
the Help menu.</p>' .
-            '<p>Exception: ' . $e->getMessage() . '</p>');
-    }
-}
-
-
-/**
- * Create a select input and populate it with project options from the database
- */
-public static function create_project_select($projectId = null, $editable = 
true)
-{
-    $editable? $disabled = '' : $disabled = 'disabled';
-    $userProjects = Utilities::get_all_user_projects( 
Session::get("gateway_id"), Session::get('username') );
-
-    echo '<select class="form-control" name="project" id="project" required ' 
. $disabled . '>';
-    if (sizeof($userProjects) > 0)
-    {
-        foreach ($userProjects as $project)
-        {
-            if ($project->projectID == $projectId)
-            {
-                $selected = 'selected';
-            }
-            else
-            {
-                $selected = '';
-            }
-
-            echo '<option value="' . $project->projectID . '" ' . $selected . 
'>' . $project->name . '</option>';
-        }
-    }
-    echo '</select>';
-    if( sizeof($userProjects) == 0 )
-    {
-        Utilities::print_warning_message('<p>You must create a project before 
you can create an experiment.
-                Click <a href="' . URL::to('/') . '/project/create">here</a> 
to create a project.</p>');
-    }
-}
-
-
-/**
- * Create a select input and populate it with applications options
- * @param null $id
- * @param bool $editable
- */
-public static function create_application_select($id = null, $editable = true)
-{
-    $disabled = $editable? '' : 'disabled';
-
-    $applicationIds = Utilities::get_all_applications();
-
-    echo '<select class="form-control" name="application" id="application" 
required ' . $disabled . '>';
-
-    if( count( $applicationIds))
-    {
-        foreach ( (array) $applicationIds as $applicationId => 
$applicationName)
-        {
-            $selected = ($applicationId == $id) ? 'selected' : '';
-    
-            echo '<option value="' . $applicationId . '" ' . $selected . '>' . 
$applicationName . '</option>';
-        }
-    }
-
-    echo '</select>';
-}
-
-
-/**
- * Create a select input and populate it with compute resources
- * available for the given application ID
- * @param $applicationId
- * @param $resourceHostId
- */
-public static function create_compute_resources_select($applicationId, 
$resourceHostId)
-{
-    return 
Utilities::get_available_app_interface_compute_resources($applicationId);
-}
-
-
-/**
- * Create form inputs to accept the inputs to the given application
- * @param $id
- * @param $isRequired
- * @internal param $required
- */
-public static function create_inputs($id, $isRequired)
-{
-    $inputs = Utilities::get_application_inputs($id);
-
-    $required = $isRequired? ' required' : '';
-
-    //var_dump( $inputs);  echo "<br/>after sort<br/>";
-    //arranging inputs in ascending order.
-    foreach ($inputs as $index => $input)
-    {
-        $order[$index] = $input->inputOrder;
-    }
-    array_multisort($order, SORT_ASC, $inputs);
-    //var_dump( $inputs); exit;
-    foreach ($inputs as $input)
-    {
-        switch ($input->type)
-        {
-            case DataType::STRING:
-                echo '<div class="form-group">
-                    <label for="experiment-input">' . $input->name . '</label>
-                    <input value="' . $input->value . '" type="text" 
class="form-control" name="' . $input->name .
-                    '" id="' . $input->name .
-                    '" placeholder="' . $input->userFriendlyDescription . '"' 
. $required . '>
-                    </div>';
-                break;
-            case DataType::INTEGER:
-            echo '<div class="form-group">
-                    <label for="experiment-input">' . $input->name . '</label>
-                    <input value="' . $input->value . '" type="number" 
class="form-control" name="' . $input->name .
-                    '" id="' . $input->name .
-                    '" placeholder="' . $input->userFriendlyDescription . '"' 
. $required . '>
-                    </div>';
-                break;
-            case DataType::FLOAT:
-                echo '<div class="form-group">
-                    <label for="experiment-input">' . $input->name . '</label>
-                    <input value="' . $input->value . '" type="number" 
step="0.01" class="form-control" name="' . $input->name .
-                    '" id="' . $input->name .
-                    '" placeholder="' . $input->userFriendlyDescription . '"' 
. $required . '>
-                    </div>';
-                break;
-            case DataType::URI:
-                echo '<div class="form-group">
-                    <label for="experiment-input">' . $input->name . '</label>
-                    <input class="file-input" type="file" name="' . 
$input->name .
-                    '" id="' . $input->name . '" ' . $required . '>
-                    <p class="help-block">' . $input->userFriendlyDescription 
. '</p>
-                    </div>';
-                break;
-            default:
-                Utilities::print_error_message('Input data type not supported!
-                    Please file a bug report using the link in the Help 
menu.');
-                break;
-        }
-    }
-}
-
-
-/**
- * Create navigation bar
- * Used for all pages
- */
-public static function create_nav_bar()
-{
-       $menus = array();
-/*
-       if( Session::has('loggedin'))
-       {
-           $menus = array
-           (
-               'Project' => array
-               (
-                   array('label' => 'Create Project', 'url' => URL::to('/') . 
'/project/create'),
-                   array('label' => 'Search Projects', 'url' => URL::to('/') . 
'/project/search')
-               ),
-               'Experiment' => array
-               (
-                   array('label' => 'Create Experiment', 'url' => URL::to('/') 
. '/experiment/create'),
-                   array('label' => 'Search Experiments', 'url' => 
URL::to('/') . '/experiment/search')
-               ),
-               'Compute Resource' => array
-               (
-                   array('label' => 'Register', 'url' => URL::to('/') . 
'/cr/create'),
-                   array('label' => 'Browse', 'url' => URL::to('/') . 
'/cr/browse')
-               ),
-               'App Catalog' => array
-               (
-                   array('label' => 'Module', 'url' => URL::to('/') . 
'/app/module'),
-                   array('label' => 'Interface', 'url' => URL::to('/') . 
'/app/interface'),
-                   array('label' => 'Deployment', 'url' => URL::to('/') . 
'/app/deployment')
-               ),
-               'Help' => array
-               (
-                   array('label' => 'Report Issue', 'url' => '#'),
-                   array('label' => 'Request Feature', 'url' => '#')
-               )
-           );
-       }
-*/
-       if( Session::has('loggedin'))
-       {
-           $menus = array
-           (
-               'Project' => array
-               (
-                   array('label' => 'Create', 'url' => URL::to('/') . 
'/project/create', "nav-active" => "project"),
-                   array('label' => 'Search', 'url' => URL::to('/') . 
'/project/search', "nav-active"=> "project"),
-                array('label' => 'Browse', 'url' => URL::to('/') . 
'/project/browse', "nav-active" => "project")
-               ),
-               'Experiment' => array
-               (
-                   array('label' => 'Create', 'url' => URL::to('/') . 
'/experiment/create', "nav-active" => "experiment"),
-                   array('label' => 'Search', 'url' => URL::to('/') . 
'/experiment/search', "nav-active" => "experiment"),
-                array('label' => 'Browse', 'url' => URL::to('/') . 
'/experiment/browse', "nav-active" => "experiment")
-               )
-           );
-
-           if( Session::has("admin"))
-           {
-               $menus['Compute Resource'] = array
-               (
-                   array('label' => 'Register', 'url' => URL::to('/') . 
'/cr/create', "nav-active" => "compute-resource"),
-                   array('label' => 'Browse', 'url' => URL::to('/') . 
'/cr/browse', "nav-active" => "compute-resource")
-               );
-               $menus['App Catalog'] = array
-               (
-                   array('label' => 'Module', 'url' => URL::to('/') . 
'/app/module', "nav-active" => "app-catalog"),
-                   array('label' => 'Interface', 'url' => URL::to('/') . 
'/app/interface', "nav-active" => "app-catalog"),
-                   array('label' => 'Deployment', 'url' => URL::to('/') . 
'/app/deployment', "nav-active" => "app-catalog")
-               );
-            /*
-            $menus['Gateway Profile'] = array
-            (
-
-                array('label' => 'Register', 'url' => URL::to('/') . 
'/gp/create', "nav-active" => "gateway-profile"),
-                array('label' => 'Browse', 'url' => URL::to('/') . 
'/gp/browse', "nav-active" => "gateway-profile")
-            );
-            */
-               
-           }
-        
-        $menus['Help'] = array
-        (
-            array('label' => 'Report Issue', 'url' => '#', "nav-active", ""),
-            array('label' => 'Request Feature', 'url' => '#', "nav-active", "")
-        );
-       }
-
-    $selfExplode = explode('/', $_SERVER['PHP_SELF']);
-
-
-
-    // nav bar and left-aligned content
-
-    echo '<nav class="navbar navbar-inverse navbar-static-top" 
role="navigation">
-            <div class="container-fluid">
-                <!-- Brand and toggle get grouped for better mobile display -->
-                <div class="navbar-header">
-                    <button type="button" class="navbar-toggle" 
data-toggle="collapse" data-target="#bs-example-navbar-collapse-1">
-                       <span class="sr-only">Toggle navigation</span>
-                       <span class="icon-bar"></span>
-                       <span class="icon-bar"></span>
-                       <span class="icon-bar"></span>
-                    </button>
-                    <a class="navbar-brand" href="' . URL::to('home') . '" 
title="PHP Gateway with Airavata">PGA</a>
-                </div>
-
-                <!-- Collect the nav links, forms, and other content for 
toggling -->
-                <div class="collapse navbar-collapse" 
id="bs-example-navbar-collapse-1">
-                    <ul class="nav navbar-nav">';
-
-
-    foreach ($menus as $label => $options)
-    {
-        Session::has('loggedin') ? $disabled = '' : $disabled = ' 
class="disabled"';
-
-        $active = "";
-        if( Session::has("nav-active") && isset( $options[0]['nav-active'] ) )
-        {
-               if( $options[0]['nav-active'] == Session::get("nav-active"))
-                       $active = " active ";
-        }
-        echo '<li class="dropdown ' . $active . '">
-                <a href="#" class="dropdown-toggle" data-toggle="dropdown">' . 
$label . '<span class="caret"></span></a>
-                <ul class="dropdown-menu" role="menu">';
-
-        if( Session::has('loggedin'))
-        {
-               foreach ($options as $option)
-               {
-                   $id = strtolower(str_replace(' ', '-', $option['label']));
-
-                   echo '<li' . $disabled . '><a href="' . $option['url'] . '" 
id=' . $id . '>' . $option['label'] . '</a></li>';
-               }
-           }
-
-        echo '</ul>
-        </li>';
-    }
-
-
-    echo '</ul>
-
-        <ul class="nav navbar-nav navbar-right">';
-
-    // right-aligned content
-
-    if ( Session::has('loggedin') )
-    {
-        $active = "";
-        if( Session::has("nav-active") )
-        {
-            if( "user-console" == Session::get("nav-active"))
-                $active = " active ";
-        }
-        if( Session::has("admin"))
-            echo '<li><a href="' . URL::to("/") . '/admin/dashboard"><span 
class="glyphicon glyphicon-user"></span> Dashboard</a></li>';
-        else
-            echo '<li><a href="' . URL::to("/") . '/user/profile"><span 
class="glyphicon glyphicon-user"></span> Profile</a></li>';
-
-        echo '<li class="dropdown ' . $active . '">
-
-                <a href="#" class="dropdown-toggle" data-toggle="dropdown">' . 
Session::get("username") . ' <span class="caret"></span></a>';
-        echo '<ul class="dropdown-menu" role="menu">';
-
-        echo '<li><a href="' . URL::to('/') . '/logout"><span class="glyphicon 
glyphicon-log-out"></span> Log out</a></li>';
-        echo    '</ul></li></ul>';
-    }
-    else
-    {
-        echo '<li><a href="' . URL::to('/') . '/create"><span class="glyphicon 
glyphicon-user"></span> Create account</a></li>';
-        echo '<li><a href="' . URL::to('/') . '/login"><span class="glyphicon 
glyphicon-log-in"></span> Log in</a></li>';
-        echo '</ul>';
-
-    }
-
-    echo '</div><!-- /.navbar-collapse -->
-    </div><!-- /.container-fluid -->
-    </nav>';
-}
-
-/**
-* Add attributes to the HTTP header.
-*/
-public static function create_http_header()
-{
-   header( 'Cache-Control: no-store, no-cache, must-revalidate' );
-   header( 'Cache-Control: post-check=0, pre-check=0', false );
-   header( 'Pragma: no-cache' );
-}
-
-/**
- * Open the XML file containing the community token
- * @param $tokenFilePath
- * @throws Exception
- */
-public static function open_tokens_file($tokenFilePath)
-{
-    if (file_exists( $tokenFilePath ))
-    {
-        $tokenFile = simplexml_load_file( $tokenFilePath );
-    }
-    else
-    {
-        throw new Exception('Error: Cannot connect to tokens database!');
-    }
-
-
-    if (!$tokenFile)
-    {
-        throw new Exception('Error: Cannot open tokens database!');
-    }
-}
-
-
-/**
- * Write the new token to the XML file
- * @param $tokenId
- */
-public static function write_new_token($tokenId)
-{    // write new tokenId to tokens file
-    $tokenFile->tokenId = $tokenId;
-
-    //Format XML to save indented tree rather than one line
-    $dom = new DOMDocument('1.0');
-    $dom->preserveWhiteSpace = false;
-    $dom->formatOutput = true;
-    $dom->loadXML( $tokenFile->asXML());
-    $dom->save( $tokenFilePath );
-}
-
-
-//moved from create project view.
-
-public static function create_project()
-{
-    $project = new Project();
-    $project->owner = Session::get('username');
-    $project->name = $_POST['project-name'];
-    $project->description = $_POST['project-description'];
-
-
-    $projectId = null;
-
-    try
-    {
-        $projectId = 
Airavata::createProject(Config::get('pga_config.airavata')['gateway-id'], 
$project);
-
-        if ($projectId)
-        {
-            Utilities::print_success_message("<p>Project 
{$_POST['project-name']} created!</p>" .
-                '<p>You will be redirected to the summary page shortly, or you 
can
-                <a href="project/summary?projId=' . $projectId . '">go 
directly</a> to the project summary page.</p>');
-        }
-        else
-        {
-            Utilities::print_error_message("Error creating project 
{$_POST['project-name']}!");
-        }
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('InvalidRequestException!<br><br>' . 
$ire->getMessage());
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('AiravataClientException!<br><br>' . 
$ace->getMessage());
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('AiravataSystemException!<br><br>' . 
$ase->getMessage());
-    }
-
-    return $projectId;
-}
-
-/**
- * Get experiments in project
- * @param $projectId
- * @return array|null
- */
-public static function get_experiments_in_project($projectId)
-{
-
-    $experiments = array();
-
-    try
-    {
-        $experiments = Airavata::getAllExperimentsInProject($projectId);
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('InvalidRequestException!<br><br>' . 
$ire->getMessage());
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('AiravataClientException!<br><br>' . 
$ace->getMessage());
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('AiravataSystemException!<br><br>' . 
$ase->getMessage());
-    }
-    catch (TTransportException $tte)
-    {
-        Utilities::print_error_message('TTransportException!<br><br>' . 
$tte->getMessage());
-    }
-
-    return $experiments;
-}
-
-public static function update_project($projectId, $projectDetails)
-{
-
-    $updatedProject = new Project();
-    $updatedProject->owner = $projectDetails["owner"];
-    $updatedProject->name = $projectDetails["name"];
-    $updatedProject->description = $projectDetails["description"];
-
-    try
-    {
-        Airavata::updateProject($projectId, $updatedProject);
-
-        //Utilities::print_success_message('Project updated! Click <a 
href="project_summary.php?projId=' . $projectId . '">here</a> to view the 
project summary.');
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('InvalidRequestException!<br><br>' . 
$ire->getMessage());
-    }
-    catch (ProjectNotFoundException $pnfe)
-    {
-        Utilities::print_error_message('ProjectNotFoundException!<br><br>' . 
$pnfe->getMessage());
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('AiravataClientException!<br><br>' . 
$ace->getMessage());
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('AiravataSystemException!<br><br>' . 
$ase->getMessage());
-    }
-}
-
-
-/**
- * Create a new experiment from the values submitted in the form
- * @return null
- */
-public static function create_experiment()
-{
-
-    $experiment = Utilities::assemble_experiment();
-    $expId = null;
-
-    try
-    {
-        if($experiment)
-        {
-            $expId = Airavata::createExperiment( Session::get("gateway_id"), 
$experiment);
-        }
-
-        if ($expId)
-        {
-            /*
-            Utilities::print_success_message("Experiment 
{$_POST['experiment-name']} created!" .
-                ' <a href="experiment_summary.php?expId=' . $expId . '">Go to 
experiment summary page</a>');
-            */
-        }
-        else
-        {
-            Utilities::print_error_message("Error creating experiment 
{$_POST['experiment-name']}!");
-        }
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('InvalidRequestException!<br><br>' . 
$ire->getMessage());
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('AiravataClientException!<br><br>' . 
$ace->getMessage());
-    }
-    catch (AiravataSystemException $ase)
-    {
-        Utilities::print_error_message('AiravataSystemException!<br><br>' . 
$ase->getMessage());
-    }
-
-    return $expId;
-}
-
-/*
- * Required in Experiment Sumamry page.
- *
-*/
-
-public static function list_output_files($experiment, $expStatus)
-{   
-
-    $expStatusVal = array_search($expStatus, ExperimentState::$__names);
-
-    if($expStatusVal == ExperimentState::COMPLETED )
-    {
-        $utility = new Utilities();
-        $experimentOutputs = $experiment->experimentOutputs;
-
-        foreach ((array)$experimentOutputs as $output)
-        {   
-            if ($output->type == DataType::URI || $output->type == 
DataType::STDOUT || $output->type == DataType::STDERR )
-            {
-                $explode = explode('/', $output->value);
-                //echo '<p>' . $output->key .  ': <a href="' . $output->value 
. '">' . $output->value . '</a></p>';
-                $outputPath = 
str_replace(Utilities::$experimentDataPathAbsolute, 
Constant::EXPERIMENT_DATA_ROOT, $output->value);
-                $outputPathArray = explode("/", $outputPath);
-
-                echo '<p>' . $output->name  . ' : ' . '<a target="_blank"
-                            href="' . URL::to("/") . "/.." . 
str_replace(Utilities::$experimentDataPathAbsolute, 
Constant::EXPERIMENT_DATA_ROOT, $output->value) . '">' . 
-                        $outputPathArray[ sizeof( $outputPathArray) - 1] . ' 
<span class="glyphicon glyphicon-new-window"></span></a></p>';
-            }
-            elseif ($output->type == DataType::STRING)
-            {
-                echo '<p>' . $output->value . '</p>';
-            }
-        }
-    }
-    else
-        echo "Experiment hasn't completed. Experiment Status is : " . 
$expStatus;
-}
-
-public static function get_experiment_values( $experiment, $project, 
$forSearch = false)
-{
-    //var_dump( $experiment); exit;
-    $expVal = array();
-    $expVal["experimentStatusString"] = "";
-    $expVal["experimentTimeOfStateChange"] = "";
-    $expVal["experimentCreationTime"] = "";
-
-    if( $experiment->experimentStatus != null)
-    {
-        $experimentStatus = $experiment->experimentStatus;
-        $experimentState = $experimentStatus->experimentState;
-        $experimentStatusString = ExperimentState::$__names[$experimentState];
-        $expVal["experimentStatusString"] = $experimentStatusString;
-        $expVal["experimentTimeOfStateChange"] = 
$experimentStatus->timeOfStateChange/1000; // divide by 1000 since 
timeOfStateChange is in ms
-        $expVal["experimentCreationTime"] = $experiment->creationTime/1000; // 
divide by 1000 since creationTime is in ms
-    }
-    $jobStatus = Airavata::getJobStatuses($experiment->experimentID);
-
-    if ($jobStatus)
-    {
-        $jobName = array_keys($jobStatus);
-        $jobState = JobState::$__names[$jobStatus[$jobName[0]]->jobState];
-    }
-    else
-    {
-        $jobState = null;
-    }
-
-    $expVal["jobState"] = $jobState;
-    
-    if(! $forSearch)
-    {
-        $userConfigData = $experiment->userConfigurationData;
-        $scheduling = $userConfigData->computationalResourceScheduling;
-        $expVal['scheduling'] = $scheduling;
-        $expVal["computeResource"] = 
Utilities::get_compute_resource($scheduling->resourceHostId);
-    }
-    $expVal["applicationInterface"] = 
Utilities::get_application_interface($experiment->applicationId);
-
-
-    switch ($experimentStatusString)
-    {
-        case 'CREATED':
-        case 'VALIDATED':
-        case 'SCHEDULED':
-        case 'CANCELED':
-        case 'FAILED':
-            $expVal["editable"] = true;
-            break;
-        default:
-            $expVal["editable"] = false;
-            break;
-    }
-
-    switch ($experimentStatusString)
-    {
-        case 'CREATED':
-        case 'VALIDATED':
-        case 'SCHEDULED':
-        case 'LAUNCHED':
-        case 'EXECUTING':
-            $expVal["cancelable"] = true;
-            break;
-        default:
-            $expVal["cancelable"] = false;
-            break;
-    }
-
-    return $expVal;
-
-}
-
-    public static function get_all_user_projects_with_pagination($limit, 
$offset)
-    {
-
-        $projects = array();
-
-        try
-        {
-            $projects = Airavata::getAllUserProjectsWithPagination( 
Session::get("gateway_id"),
-                Session::get("username"), $limit, $offset);
-        }
-        catch (InvalidRequestException $ire)
-        {
-            Utilities::print_error_message('InvalidRequestException!<br><br>' 
. $ire->getMessage());
-        }
-        catch (AiravataClientException $ace)
-        {
-            Utilities::print_error_message('AiravataClientException!<br><br>' 
. $ace->getMessage());
-        }
-        catch (AiravataSystemException $ase)
-        {
-            if ($ase->airavataErrorType == 2) // 2 = INTERNAL_ERROR
-            {
-                Utilities::print_info_message('<p>You have not created any 
projects yet, so no results will be returned!</p>
-                                <p>Click <a href="create_project.php">here</a> 
to create a new project.</p>');
-            }
-            else
-            {
-                Utilities::print_error_message('There was a problem with 
Airavata. Please try again later, or report a bug using the link in the Help 
menu.');
-                //print_error_message('AiravataSystemException!<br><br>' . 
$ase->airavataErrorType . ': ' . $ase->getMessage());
-            }
-        }
-        catch (TTransportException $tte)
-        {
-            Utilities::print_error_message('TTransportException!<br><br>' . 
$tte->getMessage());
-        }
-
-        return $projects;
-    }
-
-
-
-    public static function get_projsearch_results_with_pagination( $searchKey, 
$searchValue, $limit, $offset)
-    {
-
-        $projects = array();
-
-        try
-        {
-            switch ( $searchKey)
-            {
-                case 'project-name':
-                    $projects = 
Airavata::searchProjectsByProjectNameWithPagination( Session::get("gateway_id"),
-                        Session::get("username"), $searchValue, $limit, 
$offset);
-                    break;
-                case 'project-description':
-                    $projects = 
$airavataclient->searchProjectsByProjectDescWithPagination( 
Session::get("gateway_id"),
-                        Session::get("username"), $searchValue, $limit, 
$offset);
-                    break;
-            }
-        }
-        catch (InvalidRequestException $ire)
-        {
-            Utilities::print_error_message('InvalidRequestException!<br><br>' 
. $ire->getMessage());
-        }
-        catch (AiravataClientException $ace)
-        {
-            Utilities::print_error_message('AiravataClientException!<br><br>' 
. $ace->getMessage());
-        }
-        catch (AiravataSystemException $ase)
-        {
-            if ($ase->airavataErrorType == 2) // 2 = INTERNAL_ERROR
-            {
-                Utilities::print_info_message('<p>You have not created any 
projects yet, so no results will be returned!</p>
-                                <p>Click <a href="create_project.php">here</a> 
to create a new project.</p>');
-            }
-            else
-            {
-                Utilities::print_error_message('There was a problem with 
Airavata. Please try again later, or report a bug using the link in the Help 
menu.');
-                //print_error_message('AiravataSystemException!<br><br>' . 
$ase->airavataErrorType . ': ' . $ase->getMessage());
-            }
-        }
-        catch (TTransportException $tte)
-        {
-            Utilities::print_error_message('TTransportException!<br><br>' . 
$tte->getMessage());
-        }
-
-        return $projects;
-    }
-
-
-public static function get_projsearch_results( $searchKey, $searchValue)
-{
-
-    $projects = array();
-
-    try
-    {
-        switch ( $searchKey)
-        {
-            case 'project-name':
-                $projects = Airavata::searchProjectsByProjectName( 
Session::get("gateway_id"), Session::get("username"), $searchValue);
-                break;
-            case 'project-description':
-                $projects = $airavataclient->searchProjectsByProjectDesc( 
Session::get("gateway_id"), Session::get("username"), $searchValue);
-                break;
-        }
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('InvalidRequestException!<br><br>' . 
$ire->getMessage());
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('AiravataClientException!<br><br>' . 
$ace->getMessage());
-    }
-    catch (AiravataSystemException $ase)
-    {
-        if ($ase->airavataErrorType == 2) // 2 = INTERNAL_ERROR
-        {
-            Utilities::print_info_message('<p>You have not created any 
projects yet, so no results will be returned!</p>
-                                <p>Click <a href="create_project.php">here</a> 
to create a new project.</p>');
-        }
-        else
-        {
-            Utilities::print_error_message('There was a problem with Airavata. 
Please try again later, or report a bug using the link in the Help menu.');
-            //print_error_message('AiravataSystemException!<br><br>' . 
$ase->airavataErrorType . ': ' . $ase->getMessage());
-        }
-    }
-    catch (TTransportException $tte)
-    {
-        Utilities::print_error_message('TTransportException!<br><br>' . 
$tte->getMessage());
-    }
-
-    return $projects;
-}
-
-
-/**
- * Create options for the search key select input
- * @param $values
- * @param $labels
- * @param $disabled
- */
-public static function create_options($values, $labels, $disabled)
-{
-    for ($i = 0; $i < sizeof($values); $i++)
-    {
-        $selected = '';
-
-        // if option was previously selected, mark it as selected
-        if (isset($_POST['search-key']))
-        {
-            if ($values[$i] == $_POST['search-key'])
-            {
-                $selected = 'selected';
-            }
-        }
-
-        echo '<option value="' . $values[$i] . '" ' . $disabled[$i] . ' ' . 
$selected . '>' . $labels[$i] . '</option>';
-    }
-}
-
-    /**
-     * Get results of the user's search of experiments with pagination
-     * @return array|null
-     */
-    public static function get_expsearch_results_with_pagination( $inputs, 
$limit, $offset)
-    {
-        $experiments = array();
-
-        try
-        {
-            $filters = array();
-            if($inputs["status-type"] != "ALL"){
-                
$filters[\Airavata\Model\Workspace\Experiment\ExperimentSearchFields::STATUS] = 
$inputs["status-type"];
-            }
-            switch ( $inputs["search-key"])
-            {
-                case 'experiment-name':
-                    
$filters[\Airavata\Model\Workspace\Experiment\ExperimentSearchFields::EXPERIMENT_NAME]
 = $inputs["search-value"];
-                    break;
-                case 'experiment-description':
-                    
$filters[\Airavata\Model\Workspace\Experiment\ExperimentSearchFields::EXPERIMENT_DESC]
 = $inputs["search-value"];
-                    break;
-                case 'application':
-                    
$filters[\Airavata\Model\Workspace\Experiment\ExperimentSearchFields::APPLICATION_ID]
 = $inputs["search-value"];
-                    break;
-                case 'creation-time':
-                    
$filters[\Airavata\Model\Workspace\Experiment\ExperimentSearchFields::FROM_DATE]
 = strtotime( $inputs["from-date"])*1000;
-                    
$filters[\Airavata\Model\Workspace\Experiment\ExperimentSearchFields::TO_DATE] 
= strtotime( $inputs["to-date"])*1000;
-                    break;
-                case '':
-            }
-            $experiments = Airavata::searchExperiments(
-                Session::get('gateway_id'), Session::get('username'), 
$filters, $limit, $offset);
-        }
-        catch (InvalidRequestException $ire)
-        {
-            Utilities::print_error_message('InvalidRequestException!<br><br>' 
. $ire->getMessage());
-        }
-        catch (AiravataClientException $ace)
-        {
-            Utilities::print_error_message('AiravataClientException!<br><br>' 
. $ace->getMessage());
-        }
-        catch (AiravataSystemException $ase)
-        {
-            if ($ase->airavataErrorType == 2) // 2 = INTERNAL_ERROR
-            {
-                Utilities::print_info_message('<p>You have not created any 
experiments yet, so no results will be returned!</p>
-                                <p>Click <a 
href="create_experiment.php">here</a> to create an experiment, or
-                                <a href="create_project.php">here</a> to 
create a new project.</p>');
-            }
-            else
-            {
-                Utilities::print_error_message('There was a problem with 
Airavata. Please try again later or report a bug using the link in the Help 
menu.');
-                //print_error_message('AiravataSystemException!<br><br>' . 
$ase->airavataErrorType . ': ' . $ase->getMessage());
-            }
-        }
-        catch (TTransportException $tte)
-        {
-            Utilities::print_error_message('TTransportException!<br><br>' . 
$tte->getMessage());
-        }
-
-        //get values of all experiments
-        $expContainer = array();
-        $expNum = 0;
-        foreach( $experiments as $experiment)
-        {
-            $expValue = Utilities::get_experiment_values( $experiment, 
Utilities::get_project($experiment->projectID), true );
-            $expContainer[$expNum]['experiment'] = $experiment;
-            if( $expValue["experimentStatusString"] == "FAILED")
-                $expValue["editable"] = false;
-            $expContainer[$expNum]['expValue'] = $expValue;
-            $expNum++;
-        }
-
-        return $expContainer;
-    }
-
-    /**
- * Get results of the user's search of experiments
- * @return array|null
- */
-public static function get_expsearch_results( $inputs)
-{
-    $experiments = array();
-
-    try
-    {
-        switch ( $inputs["search-key"])
-        {
-            case 'experiment-name':
-                $experiments = 
Airavata::searchExperimentsByName(Session::get('gateway_id'), 
Session::get('username'), $inputs["search-value"]);
-                break;
-            case 'experiment-description':
-                $experiments = 
Airavata::searchExperimentsByDesc(Session::get('gateway_id'), 
Session::get('username'), $inputs["search-value"]);
-                break;
-            case 'application':
-                $experiments = 
Airavata::searchExperimentsByApplication(Session::get('gateway_id'), 
Session::get('username'), $inputs["search-value"]);
-                break;
-            case 'creation-time':
-                $experiments = 
Airavata::searchExperimentsByCreationTime(Session::get('gateway_id'), 
Session::get('username'), strtotime( $inputs["from-date"])*1000, strtotime( 
$inputs["to-date"])*1000 );
-                break;
-            case '':
-        }
-    }
-    catch (InvalidRequestException $ire)
-    {
-        Utilities::print_error_message('InvalidRequestException!<br><br>' . 
$ire->getMessage());
-    }
-    catch (AiravataClientException $ace)
-    {
-        Utilities::print_error_message('AiravataClientException!<br><br>' . 
$ace->getMessage());
-    }
-    catch (AiravataSystemException $ase)
-    {
-        if ($ase->airavataErrorType == 2) // 2 = INTERNAL_ERROR
-        {
-            Utilities::print_info_message('<p>You have not created any 
experiments yet, so no results will be returned!</p>
-                                <p>Click <a 
href="create_experiment.php">here</a> to create an experiment, or
-                                <a href="create_project.php">here</a> to 
create a new project.</p>');
-        }
-        else
-        {
-            Utilities::print_error_message('There was a problem with Airavata. 
Please try again later or report a bug using the link in the Help menu.');
-            //print_error_message('AiravataSystemException!<br><br>' . 
$ase->airavataErrorType . ': ' . $ase->getMessage());
-        }
-    }
-    catch (TTransportException $tte)
-    {
-        Utilities::print_error_message('TTransportException!<br><br>' . 
$tte->getMessage());
-    }
-
-    //get values of all experiments
-    $expContainer = array();
-    $expNum = 0;
-    foreach( $experiments as $experiment)
-    {
-        $expValue = Utilities::get_experiment_values( $experiment, 
Utilities::get_project($experiment->projectID), true );
-        $expContainer[$expNum]['experiment'] = $experiment;
-        if( $expValue["experimentStatusString"] == "FAILED")
-            $expValue["editable"] = false;
-        $expContainer[$expNum]['expValue'] = $expValue;
-        $expNum++;
-    }
-
-    return $expContainer;
-}
-
-    /**
-     * Get results of the user's all experiments with pagination.
-     * Results are ordered creation time DESC
-     * @return array|null
-     */
-    public static function get_all_user_experiments_with_pagination($limit, 
$offset)
-    {
-        $experiments = array();
-
-        try
-        {
-            $experiments = Airavata::getAllUserExperimentsWithPagination(
-                Session::get('gateway_id'), Session::get('username'), $limit, 
$offset
-            );
-        }
-        catch (InvalidRequestException $ire)
-        {
-            Utilities::print_error_message('InvalidRequestException!<br><br>' 
. $ire->getMessage());
-        }
-        catch (AiravataClientException $ace)
-        {
-            Utilities::print_error_message('AiravataClientException!<br><br>' 
. $ace->getMessage());
-        }
-        catch (AiravataSystemException $ase)
-        {
-            if ($ase->airavataErrorType == 2) // 2 = INTERNAL_ERROR
-            {
-                Utilities::print_info_message('<p>You have not created any 
experiments yet, so no results will be returned!</p>
-                                <p>Click <a 
href="create_experiment.php">here</a> to create an experiment, or
-                                <a href="create_project.php">here</a> to 
create a new project.</p>');
-            }
-            else
-            {
-                Utilities::print_error_message('There was a problem with 
Airavata. Please try again later or report a bug using the link in the Help 
menu.');
-                //print_error_message('AiravataSystemException!<br><br>' . 
$ase->airavataErrorType . ': ' . $ase->getMessage());
-            }
-        }
-        catch (TTransportException $tte)
-        {
-            Utilities::print_error_message('TTransportException!<br><br>' . 
$tte->getMessage());
-        }
-
-        //get values of all experiments
-        $expContainer = array();
-        $expNum = 0;
-        foreach( $experiments as $experiment)
-        {
-            $expValue = Utilities::get_experiment_values( $experiment, 
Utilities::get_project($experiment->projectID), true );
-            $expContainer[$expNum]['experiment'] = $experiment;
-            if( $expValue["experimentStatusString"] == "FAILED")
-                $expValue["editable"] = false;
-            $expContainer[$expNum]['expValue'] = $expValue;
-            $expNum++;
-        }
-
-        return $expContainer;
-    }
-
-public static function getExpStates(){
-    return ExperimentState::$__names;
-}
-
-
-public static function apply_changes_to_experiment($experiment, $input)
-{
-    $experiment->name = $input['experiment-name'];
-    $experiment->description = rtrim($input['experiment-description']);
-    $experiment->projectID = $input['project'];
-    //$experiment->applicationId = $_POST['application'];
-
-    $userConfigDataUpdated = $experiment->userConfigurationData;
-    $schedulingUpdated = 
$userConfigDataUpdated->computationalResourceScheduling;
-
-    $schedulingUpdated->resourceHostId = $input['compute-resource'];
-    $schedulingUpdated->nodeCount = $input['node-count'];
-    $schedulingUpdated->queueName = $_POST['queue-name'];
-    $schedulingUpdated->totalCPUCount = $input['cpu-count'];
-    //$schedulingUpdated->numberOfThreads = $input['threads'];
-    $schedulingUpdated->wallTimeLimit = $input['wall-time'];
-    //$schedulingUpdated->totalPhysicalMemory = $input['memory'];
-
-    /*
-    switch ($_POST['compute-resource'])
-    {
-        case 'trestles.sdsc.edu':
-            $schedulingUpdated->ComputationalProjectAccount = 'sds128';
-            break;
-        case 'stampede.tacc.xsede.org':
-        case 'lonestar.tacc.utexas.edu':
-            $schedulingUpdated->ComputationalProjectAccount = 'TG-STA110014S';
-            break;
-        default:
-            $schedulingUpdated->ComputationalProjectAccount = 'admin';
-    }
-    */
-
-    $userConfigDataUpdated->computationalResourceScheduling = 
$schedulingUpdated;
-    if( isset( $input["userDN"]) )
-    {
-        $userConfigDataUpdated->generateCert = 1;
-        $userConfigDataUpdated->userDN = $input["userDN"];
-    }
-
-    $experiment->userConfigurationData = $userConfigDataUpdated;
-
-    $applicationInputs = 
Utilities::get_application_inputs($experiment->applicationId);
-
-    $experimentInputs = $experiment->experimentInputs; // get current inputs
-    //var_dump($experimentInputs);
-    $experimentInputs = Utilities::process_inputs($applicationInputs, 
$experimentInputs); // get new inputs
-    //var_dump($experimentInputs);
-
-    if ($experimentInputs)
-    {
-        $experiment->experimentInputs = $experimentInputs;
-        //var_dump($experiment);
-        return $experiment;
-    }
-}
-
-public static function get_job_details( $experimentId){
-    return Airavata::getJobDetails( $experimentId);
-}
-
-public static function get_transfer_details( $experimentId){
-    return Airavata::getDataTransferDetails( $experimentId);
-}
-
-public static function getQueueDatafromResourceId( $crId){
-    $resourceObject = Airavata::getComputeResource( $crId);
-    return $resourceObject->batchQueues;
-}
-
-}
-
-?>

http://git-wip-us.apache.org/repos/asf/airavata-php-gateway/blob/2fbd9289/app/models/Constant.php
----------------------------------------------------------------------
diff --git a/app/models/Constant.php b/app/models/Constant.php
deleted file mode 100644
index f18ba41..0000000
--- a/app/models/Constant.php
+++ /dev/null
@@ -1,48 +0,0 @@
-<?php
-
-class Constant extends Eloquent{
-
-
-       const EXPERIMENT_DATA_ROOT = '/../experimentData/';
-
-       /* 
-
-       ------------ now rest all are handled at config/app-config.ini 
-------------------
-
-       const AIRAVATA_SERVER = 'gw111.iu.xsede.org';
-       //const AIRAVATA_SERVER = 'gw127.iu.xsede.org';
-       //const AIRAVATA_SERVER = 'gw56.iu.xsede.org'; //Mirror
-       //const AIRAVATA_PORT = 8930; //development
-       const AIRAVATA_PORT = 9930; //production
-       const AIRAVATA_TIMEOUT = 100000;
-       const EXPERIMENT_DATA_ROOT = '/../experimentData/';
-
-       const SSH_USER = 'root';
-       //const DATA_PATH = 'file://home/pga/production/experimentData/';
-
-       const EXPERIMENT_DATA_ROOT_ABSOLUTE = '/var/www/experimentData/';
-       //const EXPERIMENT_DATA_ROOT_ABSOLUTE = 'C:/wamp/www/experimentData/';
-
-       //const USER_STORE = 'WSO2','XML','USER_API';
-       const USER_STORE = 'WSO2';
-
-       //This will need to be updated everytime a new user role is being added 
for
-       //specific purposes.
-       const ADMIN_ROLE = "admin";
-       const GATEWAY_ADMIN_ROLE = "gateway_admin";
-       const USER_ROLE = "Internal/everyone";
-
-       //identity server roles assigned for Gateway
-       const GATEWAY_ROLE_PREPEND = "gateway_";
-       const GATEWAY_ROLE_ADMIN_APPEND = "_admin";
-
-       const REQ_URL = 
'https://gw111.iu.xsede.org:8443/credential-store/acs-start-servlet';
-       const GATEWAY_NAME = 'PHP-Reference-Gateway';
-       const EMAIL = '[email protected]';       
-
-       const SERVER_ALLOWED_FILE_SIZE = 64; // in MB
-
-       */ 
-}
-
-?>

http://git-wip-us.apache.org/repos/asf/airavata-php-gateway/blob/2fbd9289/app/models/User.php
----------------------------------------------------------------------
diff --git a/app/models/User.php b/app/models/User.php
deleted file mode 100755
index 0d96f81..0000000
--- a/app/models/User.php
+++ /dev/null
@@ -1,25 +0,0 @@
-<?php
-
-use Illuminate\Auth\UserTrait;
-use Illuminate\Auth\UserInterface;
-use Illuminate\Auth\Reminders\RemindableTrait;
-use Illuminate\Auth\Reminders\RemindableInterface;
-
-class User extends Eloquent implements UserInterface, RemindableInterface {
-
-       use UserTrait, RemindableTrait;
-
-       /**
-        * The database table used by the model.
-        *
-        * @var string
-        */
-       protected $table = 'users';
-
-       /**
-        * The attributes excluded from the model's JSON form.
-        *
-        * @var array
-        */
-       protected $hidden = array('password', 'remember_token');
-}

http://git-wip-us.apache.org/repos/asf/airavata-php-gateway/blob/2fbd9289/app/routes.php
----------------------------------------------------------------------
diff --git a/app/routes.php b/app/routes.php
index 1c56f88..7104b5e 100755
--- a/app/routes.php
+++ b/app/routes.php
@@ -28,8 +28,8 @@ Route::get("logout", "AccountController@logout");
 
 Route::get("forgot-password", "AccountController@forgotPassword");
 
-Route::get("setUserTimezone", function(){
-       Session::set("user_timezone", Input::get("timezone"));
+Route::get("setUserTimezone", function () {
+    Session::set("user_timezone", Input::get("timezone"));
 });
 /*
  * The following routes will not work without logging in.
@@ -89,17 +89,17 @@ Route::post("experiment/browse", 
"ExperimentController@browseView");
  * Compute Resources Routes
 */
 
-Route::get("cr/create", function(){
-       return Redirect::to("cr/create/step1");
+Route::get("cr/create", function () {
+    return Redirect::to("cr/create/step1");
 });
 
-Route::get("cr/create", "ComputeResource@createView"); 
+Route::get("cr/create", "ComputeResource@createView");
 
 Route::post("cr/create", "ComputeResource@createSubmit");
 
-Route::get("cr/edit", "ComputeResource@editView"); 
+Route::get("cr/edit", "ComputeResource@editView");
 
-Route::post("cr/edit", "ComputeResource@editSubmit"); 
+Route::post("cr/edit", "ComputeResource@editSubmit");
 
 Route::get("cr/browse", "ComputeResource@browseView");
 
@@ -168,8 +168,8 @@ Route::get("admin/dashboard/experiments", 
"AdminController@experimentsView");
 
 Route::get("admin/dashboard/resources", "AdminController@resourcesView");
 
-Route::get("admin/dashboard/experiment/summary", function(){
-       return Redirect::to("experiment/summary?expId=" . $_GET["expId"] . 
"&dashboard=true");
+Route::get("admin/dashboard/experiment/summary", function () {
+    return Redirect::to("experiment/summary?expId=" . $_GET["expId"] . 
"&dashboard=true");
 });
 
 Route::get("admin/dashboard/credential-store", 
"AdminController@credentialStoreView");
@@ -194,15 +194,15 @@ Route::post("admin/add-gateway", 
"AdminController@addGateway");
 Route::get("admin/add-gateway", "AdminController@addGateway");
 
 //Airavata Server Check
-Route::get("airavata/down", function(){
-       return View::make("server-down");
+Route::get("airavata/down", function () {
+    return View::make("server-down");
 });
 /*
  * Test Routes.
 */
 
-Route::get("testjob", function(){
-       //print_r( Session::all());
+Route::get("testjob", function () {
+    //print_r( Session::all());
 });
 
 

http://git-wip-us.apache.org/repos/asf/airavata-php-gateway/blob/2fbd9289/app/views/account/create.blade.php
----------------------------------------------------------------------
diff --git a/app/views/account/create.blade.php 
b/app/views/account/create.blade.php
index 9feb720..7d92a7f 100755
--- a/app/views/account/create.blade.php
+++ b/app/views/account/create.blade.php
@@ -1,7 +1,7 @@
 @extends('layout.basic')
 
 @section('page-header')
-    @parent
+@parent
 @stop
 
 @section('content')
@@ -15,25 +15,26 @@
         </h3>
     </div>
     @if ($errors->has())
-        
-            @foreach ($errors->all() as $error)
-                {{ Utilities::print_error_message($error) }}        
-            @endforeach
-        
-        @endif
 
-    <form action="create" method="post" role="form">
-        
-    @if( Session::has('username_exists'))
-            {{ Utilities::print_error_message('The username you entered is 
already in use. Please select another.') }}
+    @foreach ($errors->all() as $error)
+    {{ Utilities::print_error_message($error) }}
+    @endforeach
+
     @endif
-    <?php
-    Session::forget("username_exists");
-    ?>
+
+    <form action="create" method="post" role="form">
+
+        @if( Session::has('username_exists'))
+        {{ Utilities::print_error_message('The username you entered is already 
in use. Please select another.') }}
+        @endif
+        <?php
+        Session::forget("username_exists");
+        ?>
         <div class="form-group required"><label 
class="control-label">Username</label>
 
             <div><input class="form-control" id="username" minlength="6" 
maxlength="30" name="username"
-                        placeholder="Username" required="required" type="text" 
 value="{{Input::old('username') }}"/></div>
+                        placeholder="Username" required="required" type="text" 
value="{{Input::old('username') }}"/>
+            </div>
         </div>
         <div class="form-group required"><label 
class="control-label">Password</label>
 
@@ -49,58 +50,60 @@
         <div class="form-group required"><label 
class="control-label">E-mail</label>
 
             <div><input class="form-control" id="email" name="email" 
placeholder="E-mail"
-                        required="required" title="" type="email"   
value="{{Input::old('email') }}"/></div>
+                        required="required" title="" type="email" 
value="{{Input::old('email') }}"/></div>
         </div>
         <div class="form-group required"><label class="control-label">First 
Name</label>
 
             <div><input class="form-control" id="first_name" maxlength="30" 
name="first_name"
-                        placeholder="First Name" required="required" title="" 
type="text"   value="{{Input::old('first_name') }}"/></div>
+                        placeholder="First Name" required="required" title="" 
type="text"
+                        value="{{Input::old('first_name') }}"/></div>
         </div>
         <div class="form-group required"><label class="control-label">Last 
Name</label>
 
             <div><input class="form-control" id="last_name" maxlength="30" 
name="last_name"
-                        placeholder="Last Name" required="required" title="" 
type="text"   value="{{Input::old('last_name') }}"/></div>
+                        placeholder="Last Name" required="required" title="" 
type="text"
+                        value="{{Input::old('last_name') }}"/></div>
         </div>
         <div class="form-group"><label 
class="control-label">Organization</label>
 
             <div><input class="form-control" id="organization" 
name="organization"
-                        placeholder="Organization" title="" type="text"   
value="{{Input::old('organization') }}"/>
+                        placeholder="Organization" title="" type="text" 
value="{{Input::old('organization') }}"/>
             </div>
         </div>
         <div class="form-group"><label class="control-label">Address</label>
 
             <div><input class="form-control" id="address" name="address"
-                        placeholder="Address" title="" type="text"   
value="{{Input::old('address') }}"/>
+                        placeholder="Address" title="" type="text" 
value="{{Input::old('address') }}"/>
             </div>
         </div>
         <div class="form-group"><label class="control-label">Country</label>
 
             <div><input class="form-control" id="country" name="country"
-                        placeholder="Country" title="" type="text"   
value="{{Input::old('country') }}"/>
+                        placeholder="Country" title="" type="text" 
value="{{Input::old('country') }}"/>
             </div>
         </div>
         <div class="form-group"><label class="control-label">Telephone</label>
 
             <div><input class="form-control" id="telephone" name="telephone"
-                        placeholder="Telephone" title="" type="tel"   
value="{{Input::old('telephone') }}"/>
+                        placeholder="Telephone" title="" type="tel" 
value="{{Input::old('telephone') }}"/>
             </div>
         </div>
         <div class="form-group"><label class="control-label">Mobile</label>
 
             <div><input class="form-control" id="mobile" name="mobile"
-                        placeholder="Mobile" title="" type="tel"   
value="{{Input::old('mobile') }}"/>
+                        placeholder="Mobile" title="" type="tel" 
value="{{Input::old('mobile') }}"/>
             </div>
         </div>
         <div class="form-group"><label class="control-label">IM</label>
 
             <div><input class="form-control" id="im" name="im"
-                        placeholder="IM" title="" type="text"   
value="{{Input::old('im') }}"/>
+                        placeholder="IM" title="" type="text" 
value="{{Input::old('im') }}"/>
             </div>
         </div>
         <div class="form-group"><label class="control-label">URL</label>
 
             <div><input class="form-control" id="url" name="url"
-                        placeholder="URL" title="" type="text"   
value="{{Input::old('url') }}"/>
+                        placeholder="URL" title="" type="text" 
value="{{Input::old('url') }}"/>
             </div>
         </div>
         <br/>

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