This is an automated email from the ASF dual-hosted git repository. dimuthuupe pushed a commit to branch develop in repository https://gitbox.apache.org/repos/asf/airavata.git
commit 3e77e160986d53f0d5d8db1bd62102a937b478ef Merge: 42be237 2af9090 Author: Dimuthu Wannipurage <[email protected]> AuthorDate: Fri Sep 14 14:04:24 2018 -0400 Merge branch 'staging' into develop modules/airavata-helix/helix-distribution/pom.xml | 16 ++ .../src/main/assembly/parser-wm-bin-assembly.xml | 85 +++++++ .../resources/parser-wm/bin/parser-wm-daemon.sh | 91 ++++++++ .../src/main/resources/parser-wm/bin/parser-wm.sh | 71 ++++++ .../src/main/resources/parser-wm/bin/setenv.sh | 46 ++++ .../parser-wm/conf}/airavata-server.properties | 35 +-- .../src/main/resources/parser-wm/conf/logback.xml | 53 +++++ .../helix/impl/participant/GlobalParticipant.java | 3 +- .../airavata/helix/impl/task/AiravataTask.java | 83 ++++--- .../airavata/helix/impl/task/env/EnvSetupTask.java | 2 +- .../helix/impl/task/parsing/CatalogEntry.java | 249 ++++++++++++++++++++ .../helix/impl/task/parsing/CatalogGraph.java | 78 +++++++ .../helix/impl/task/parsing/CatalogUtil.java | 105 +++++++++ .../helix/impl/task/parsing/DataParsingTask.java | 206 ++++++++++++++++ .../helix/impl/task/parsing/ParserRequest.java | 84 +++++++ .../parsing/shortestpath/DijkstraShortestPath.java | 258 +++++++++++++++++++++ .../task/parsing/shortestpath/DirectedGraph.java | 73 ++++++ .../helix/impl/task/parsing/shortestpath/Edge.java | 64 +++++ .../impl/task/parsing/shortestpath/Vertex.java | 63 +++++ .../helix/impl/task/staging/DataStagingTask.java | 8 +- .../impl/task/staging/InputDataStagingTask.java | 6 +- .../impl/task/staging/OutputDataStagingTask.java | 2 +- .../helix/impl/workflow/ParserWorkflowManager.java | 121 ++++++++++ .../src/main/resources/airavata-server.properties | 8 +- .../apache/airavata/helix/core/AbstractTask.java | 9 + .../airavata/helix/core/util/MonitoringUtil.java | 25 +- .../resources/email-monitor/conf/email-config.yaml | 1 + 27 files changed, 1777 insertions(+), 68 deletions(-)
