[airavata] branch ultrascan-mainteinence updated: Prioritizing external parameters when constructing the slurm script

[dimuthuupe]

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dimuthuupe pushed a commit to branch ultrascan-mainteinence
in repository https://gitbox.apache.org/repos/asf/airavata.git


The following commit(s) were added to refs/heads/ultrascan-mainteinence by this 
push:
     new da70969  Prioritizing external parameters when constructing the slurm 
script
da70969 is described below

commit da70969e7a5abffab0e2bd9420a5da265cb231bb
Author: Dimuthu Wannipurage <dimuthu.upeks...@gmail.com>
AuthorDate: Wed Dec 23 19:24:04 2020 -0500

    Prioritizing external parameters when constructing the slurm script
---
 .../configuration/server/src/main/resources/SLURM_Groovy.template | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git 
a/modules/configuration/server/src/main/resources/SLURM_Groovy.template 
b/modules/configuration/server/src/main/resources/SLURM_Groovy.template
index 457ceee..c09ae1b 100644
--- a/modules/configuration/server/src/main/resources/SLURM_Groovy.template
+++ b/modules/configuration/server/src/main/resources/SLURM_Groovy.template
@@ -8,25 +8,25 @@
    def rmQueue = checkCommand(preJobCommands, 'RM #SBATCH -p')
    preJobCommands = preJobCommands - extQueue
    preJobCommands = preJobCommands - rmQueue
-   if (queueName != null && queueName != "" && rmQueue == null) out.print 
extQueue ? extQueue + '\n' : '#SBATCH -p ' + queueName + '\n'
+   if (extQueue) out.print extQueue + '\n' else if (queueName != null && 
queueName != "" && rmQueue == null) out.print '#SBATCH -p ' + queueName + '\n'
 
    def extNodes = checkCommand(preJobCommands, '#SBATCH -N')
    def rmNodes = checkCommand(preJobCommands, 'RM #SBATCH -N')
    preJobCommands = preJobCommands - extNodes
    preJobCommands = preJobCommands - rmNodes
-   if (nodes != null && nodes != "" && rmNodes == null) out.print extNodes? 
extNodes + '\n' : '#SBATCH -N ' + nodes + '\n'
+   if (extNodes) out.print extNodes + '\n' else if (nodes != null && nodes != 
"" && rmNodes == null) out.print '#SBATCH -N ' + nodes + '\n'
 
    def extCpu = checkCommand(preJobCommands, '#SBATCH -n')
    def rmCpu = checkCommand(preJobCommands, 'RM #SBATCH -n')
    preJobCommands = preJobCommands - extCpu
    preJobCommands = preJobCommands - rmCpu
-   if (cpuCount != null && cpuCount != "" && rmCpu == null) out.print extCpu? 
extCpu + '\n' : '#SBATCH -n ' + cpuCount + '\n'
+   if (extCpu) out.print extCpu + '\n' else if (cpuCount != null && cpuCount 
!= "" && rmCpu == null) out.print '#SBATCH -n ' + cpuCount + '\n'
 
    def extMem = checkCommand(preJobCommands, '#SBATCH --mem=')
    def rmMem = checkCommand(preJobCommands, 'RM #SBATCH --mem=')
    preJobCommands = preJobCommands - extMem
    preJobCommands = preJobCommands - rmMem
-   if (usedMem != null && usedMem != "" && rmMem == null) out.print extMem ? 
extMem + '\n': '#SBATCH --mem=' + usedMem + 'M\n'
+   if (extMem) out.print extMem + '\n' else if (usedMem != null && usedMem != 
"" && rmMem == null) out.print '#SBATCH --mem=' + usedMem + 'M\n'
 
    if (mailAddress != null && mailAddress != "") out.print '#SBATCH 
--mail-user=' + mailAddress + '\n'
    if (accountString != null && accountString != "" ) out.print '#SBATCH -A ' 
+ accountString + '\n'