Taragolis opened a new pull request, #38978:
URL: https://github.com/apache/airflow/pull/38978
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This test starts failed during build `mpi4py` package, currently it blocks
to run finalise step for tests, e.g. summarise warnings.
https://github.com/apache/airflow/actions/runs/8666405114/job/23769539549?pr=38905
```console
#6 13.21 Building wheels for collected packages: mpi4py
#6 13.21 Building wheel for mpi4py (pyproject.toml): started
#6 14.13 Building wheel for mpi4py (pyproject.toml): finished with status
'error'
#6 14.16 error: subprocess-exited-with-error
#6 14.16
#6 14.16 × Building wheel for mpi4py (pyproject.toml) did not run
successfully.
#6 14.16 │ exit code: 1
#6 14.16 ╰─> [212 lines of output]
#6 14.16 running bdist_wheel
#6 14.16 running build
#6 14.16 running build_src
#6 14.16 running build_py
#6 14.16 creating build
#6 14.16 creating build/lib.linux-x86_64-cpython-38
#6 14.16 creating build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 copying src/mpi4py/run.py ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 copying src/mpi4py/__init__.py ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 copying src/mpi4py/bench.py ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 copying src/mpi4py/__main__.py ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 creating build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/_base.py ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/pool.py ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/_core.py ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/server.py ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/__init__.py ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/aplus.py ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/__main__.py ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/_lib.py ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 creating build/lib.linux-x86_64-cpython-38/mpi4py/util
#6 14.16 copying src/mpi4py/util/dtlib.py ->
build/lib.linux-x86_64-cpython-38/mpi4py/util
#6 14.16 copying src/mpi4py/util/__init__.py ->
build/lib.linux-x86_64-cpython-38/mpi4py/util
#6 14.16 copying src/mpi4py/util/pkl5.py ->
build/lib.linux-x86_64-cpython-38/mpi4py/util
#6 14.16 copying src/mpi4py/MPI.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 copying src/mpi4py/run.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 copying src/mpi4py/__main__.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 copying src/mpi4py/bench.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 copying src/mpi4py/__init__.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 copying src/mpi4py/dl.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 copying src/mpi4py/py.typed ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 copying src/mpi4py/__init__.pxd ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 copying src/mpi4py/MPI.pxd ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 copying src/mpi4py/libmpi.pxd ->
build/lib.linux-x86_64-cpython-38/mpi4py
#6 14.16 creating build/lib.linux-x86_64-cpython-38/mpi4py/include
#6 14.16 creating
build/lib.linux-x86_64-cpython-38/mpi4py/include/mpi4py
#6 14.16 copying src/mpi4py/include/mpi4py/mpi4py.MPI.h ->
build/lib.linux-x86_64-cpython-38/mpi4py/include/mpi4py
#6 14.16 copying src/mpi4py/include/mpi4py/mpi4py.MPI_api.h ->
build/lib.linux-x86_64-cpython-38/mpi4py/include/mpi4py
#6 14.16 copying src/mpi4py/include/mpi4py/mpi4py.h ->
build/lib.linux-x86_64-cpython-38/mpi4py/include/mpi4py
#6 14.16 copying src/mpi4py/include/mpi4py/mpi4py.i ->
build/lib.linux-x86_64-cpython-38/mpi4py/include/mpi4py
#6 14.16 copying src/mpi4py/include/mpi4py/mpi.pxi ->
build/lib.linux-x86_64-cpython-38/mpi4py/include/mpi4py
#6 14.16 copying src/mpi4py/futures/__main__.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/_core.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/server.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/__init__.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/pool.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/_lib.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/futures/aplus.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py/futures
#6 14.16 copying src/mpi4py/util/pkl5.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py/util
#6 14.16 copying src/mpi4py/util/dtlib.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py/util
#6 14.16 copying src/mpi4py/util/__init__.pyi ->
build/lib.linux-x86_64-cpython-38/mpi4py/util
#6 14.16 running build_clib
#6 14.16 MPI configuration: [mpi] from 'mpi.cfg'
#6 14.16 MPI C compiler: /usr/bin/mpicc
#6 14.16 MPI C++ compiler: /usr/bin/mpicxx
#6 14.16 MPI F compiler: /usr/bin/mpifort
#6 14.16 MPI F90 compiler: /usr/bin/mpif90
#6 14.16 MPI F77 compiler: /usr/bin/mpif77
#6 14.16 checking for library 'lmpe' ...
#6 14.16 /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g
-fwrapv -O3 -Wall -fPIC -c _configtest.c -o _configtest.o
#6 14.16 /usr/bin/mpicc _configtest.o -llmpe -o _configtest
#6 14.16 /usr/bin/ld: cannot find -llmpe: No such file or directory
#6 14.16 collect2: error: ld returned 1 exit status
#6 14.16 failure.
#6 14.16 removing: _configtest.c _configtest.o
#6 14.16 building 'mpe' dylib library
#6 14.16 creating build/temp.linux-x86_64-cpython-38
#6 14.16 creating build/temp.linux-x86_64-cpython-38/src
#6 14.16 creating build/temp.linux-x86_64-cpython-38/src/lib-pmpi
#6 14.16 /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g
-fwrapv -O3 -Wall -fPIC -c src/lib-pmpi/mpe.c -o
build/temp.linux-x86_64-cpython-38/src/lib-pmpi/mpe.o
#6 14.16 creating build/lib.linux-x86_64-cpython-38/mpi4py/lib-pmpi
#6 14.16 /usr/bin/mpicc -shared -Wl,--no-as-needed
build/temp.linux-x86_64-cpython-38/src/lib-pmpi/mpe.o -o
build/lib.linux-x86_64-cpython-38/mpi4py/lib-pmpi/libmpe.so
#6 14.16 checking for library 'vt-mpi' ...
#6 14.16 /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g
-fwrapv -O3 -Wall -fPIC -c _configtest.c -o _configtest.o
#6 14.16 /usr/bin/mpicc _configtest.o -lvt-mpi -o _configtest
#6 14.16 /usr/bin/ld: cannot find -lvt-mpi: No such file or directory
#6 14.16 collect2: error: ld returned 1 exit status
#6 14.16 failure.
#6 14.16 removing: _configtest.c _configtest.o
#6 14.16 checking for library 'vt.mpi' ...
#6 14.16 /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g
-fwrapv -O3 -Wall -fPIC -c _configtest.c -o _configtest.o
#6 14.16 /usr/bin/mpicc _configtest.o -lvt.mpi -o _configtest
#6 14.16 /usr/bin/ld: cannot find -lvt.mpi: No such file or directory
#6 14.16 collect2: error: ld returned 1 exit status
#6 14.16 failure.
#6 14.16 removing: _configtest.c _configtest.o
#6 14.16 building 'vt' dylib library
#6 14.16 /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g
-fwrapv -O3 -Wall -fPIC -c src/lib-pmpi/vt.c -o
build/temp.linux-x86_64-cpython-38/src/lib-pmpi/vt.o
#6 14.16 /usr/bin/mpicc -shared -Wl,--no-as-needed
build/temp.linux-x86_64-cpython-38/src/lib-pmpi/vt.o -o
build/lib.linux-x86_64-cpython-38/mpi4py/lib-pmpi/libvt.so
#6 14.16 checking for library 'vt-mpi' ...
#6 14.16 /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g
-fwrapv -O3 -Wall -fPIC -c _configtest.c -o _configtest.o
#6 14.16 /usr/bin/mpicc _configtest.o -lvt-mpi -o _configtest
#6 14.16 /usr/bin/ld: cannot find -lvt-mpi: No such file or directory
#6 14.16 collect2: error: ld returned 1 exit status
#6 14.16 failure.
#6 14.16 removing: _configtest.c _configtest.o
#6 14.16 checking for library 'vt.mpi' ...
#6 14.16 /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g
-fwrapv -O3 -Wall -fPIC -c _configtest.c -o _configtest.o
#6 14.16 /usr/bin/mpicc _configtest.o -lvt.mpi -o _configtest
#6 14.16 /usr/bin/ld: cannot find -lvt.mpi: No such file or directory
#6 14.16 collect2: error: ld returned 1 exit status
#6 14.16 failure.
#6 14.16 removing: _configtest.c _configtest.o
#6 14.16 building 'vt-mpi' dylib library
#6 14.16 /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g
-fwrapv -O3 -Wall -fPIC -c src/lib-pmpi/vt-mpi.c -o
build/temp.linux-x86_64-cpython-38/src/lib-pmpi/vt-mpi.o
#6 14.16 /usr/bin/mpicc -shared -Wl,--no-as-needed
build/temp.linux-x86_64-cpython-38/src/lib-pmpi/vt-mpi.o -o
build/lib.linux-x86_64-cpython-38/mpi4py/lib-pmpi/libvt-mpi.so
#6 14.16 checking for library 'vt-hyb' ...
#6 14.16 /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g
-fwrapv -O3 -Wall -fPIC -c _configtest.c -o _configtest.o
#6 14.16 /usr/bin/mpicc _configtest.o -lvt-hyb -o _configtest
#6 14.16 /usr/bin/ld: cannot find -lvt-hyb: No such file or directory
#6 14.16 collect2: error: ld returned 1 exit status
#6 14.16 failure.
#6 14.16 removing: _configtest.c _configtest.o
#6 14.16 checking for library 'vt.ompi' ...
#6 14.16 /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g
-fwrapv -O3 -Wall -fPIC -c _configtest.c -o _configtest.o
#6 14.16 /usr/bin/mpicc _configtest.o -lvt.ompi -o _configtest
#6 14.16 /usr/bin/ld: cannot find -lvt.ompi: No such file or directory
#6 14.16 collect2: error: ld returned 1 exit status
#6 14.16 failure.
#6 14.16 removing: _configtest.c _configtest.o
#6 14.16 building 'vt-hyb' dylib library
#6 14.16 /usr/bin/mpicc -Wno-unused-result -Wsign-compare -DNDEBUG -g
-fwrapv -O3 -Wall -fPIC -c src/lib-pmpi/vt-hyb.c -o
build/temp.linux-x86_64-cpython-38/src/lib-pmpi/vt-hyb.o
#6 14.16 /usr/bin/mpicc -shared -Wl,--no-as-needed
build/temp.linux-x86_64-cpython-38/src/lib-pmpi/vt-hyb.o -o
build/lib.linux-x86_64-cpython-38/mpi4py/lib-pmpi/libvt-hyb.so
#6 14.16 running build_ext
#6 14.16 MPI configuration: [mpi] from 'mpi.cfg'
#6 14.16 MPI C compiler: /usr/bin/mpicc
#6 14.16 MPI C++ compiler: /usr/bin/mpicxx
#6 14.16 MPI F compiler: /usr/bin/mpifort
#6 14.16 MPI F90 compiler: /usr/bin/mpif90
#6 14.16 MPI F77 compiler: /usr/bin/mpif77
#6 14.16 checking for dlopen() availability ...
#6 14.16 checking for header 'dlfcn.h' ...
#6 14.16 gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3
-Wall -fPIC -I/home/airflow/.local/include -I/usr/local/include/python3.8 -c
_configtest.c -o _configtest.o
#6 14.16 success!
#6 14.16 removing: _configtest.c _configtest.o
#6 14.16 success!
#6 14.16 checking for library 'dl' ...
#6 14.16 gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3
-Wall -fPIC -I/home/airflow/.local/include -I/usr/local/include/python3.8 -c
_configtest.c -o _configtest.o
#6 14.16 Traceback (most recent call last):
#6 14.16 File
"/home/airflow/.local/lib/python3.8/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py",
line 353, in <module>
#6 14.16 main()
#6 14.16 File
"/home/airflow/.local/lib/python3.8/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py",
line 335, in main
#6 14.16 json_out['return_val'] = hook(**hook_input['kwargs'])
#6 14.16 File
"/home/airflow/.local/lib/python3.8/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py",
line 251, in build_wheel
#6 14.16 return _build_backend().build_wheel(wheel_directory,
config_settings,
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/build_meta.py",
line 410, in build_wheel
#6 14.16 return self._build_with_temp_dir(
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/build_meta.py",
line 395, in _build_with_temp_dir
#6 14.16 self.run_setup()
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/build_meta.py",
line 311, in run_setup
#6 14.16 exec(code, locals())
#6 14.16 File "<string>", line 644, in <module>
#6 14.16 File "<string>", line 641, in main
#6 14.16 File "<string>", line 492, in run_setup
#6 14.16 File
"/tmp/pip-install-f_toa7f8/mpi4py_38c005ab88564a30a5f545a9f728ba39/conf/mpidistutils.py",
line 541, in setup
#6 14.16 return fcn_setup(**attrs)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/__init__.py",
line 104, in setup
#6 14.16 return distutils.core.setup(**attrs)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/core.py",
line 184, in setup
#6 14.16 return run_commands(dist)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/core.py",
line 200, in run_commands
#6 14.16 dist.run_commands()
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/dist.py",
line 969, in run_commands
#6 14.16 self.run_command(cmd)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/dist.py",
line 967, in run_command
#6 14.16 super().run_command(command)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/dist.py",
line 988, in run_command
#6 14.16 cmd_obj.run()
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/wheel/bdist_wheel.py",
line 368, in run
#6 14.16 self.run_command("build")
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/cmd.py",
line 316, in run_command
#6 14.16 self.distribution.run_command(command)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/dist.py",
line 967, in run_command
#6 14.16 super().run_command(command)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/dist.py",
line 988, in run_command
#6 14.16 cmd_obj.run()
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/command/build.py",
line 132, in run
#6 14.16 self.run_command(cmd_name)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/cmd.py",
line 316, in run_command
#6 14.16 self.distribution.run_command(command)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/dist.py",
line 967, in run_command
#6 14.16 super().run_command(command)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/dist.py",
line 988, in run_command
#6 14.16 cmd_obj.run()
#6 14.16 File
"/tmp/pip-install-f_toa7f8/mpi4py_38c005ab88564a30a5f545a9f728ba39/conf/mpidistutils.py",
line
[1213](https://github.com/apache/airflow/actions/runs/8666405114/job/23769539549?pr=38905#step:9:1214),
in run
#6 14.16 cmd_build_ext.build_ext.run(self)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/command/build_ext.py",
line 91, in run
#6 14.16 _build_ext.run(self)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/command/build_ext.py",
line 359, in run
#6 14.16 self.build_extensions()
#6 14.16 File
"/tmp/pip-install-f_toa7f8/mpi4py_38c005ab88564a30a5f545a9f728ba39/conf/mpidistutils.py",
line 1241, in build_extensions
#6 14.16 self.build_extension(ext)
#6 14.16 File
"/tmp/pip-install-f_toa7f8/mpi4py_38c005ab88564a30a5f545a9f728ba39/conf/mpidistutils.py",
line 1272, in build_extension
#6 14.16 self.config_extension(ext)
#6 14.16 File
"/tmp/pip-install-f_toa7f8/mpi4py_38c005ab88564a30a5f545a9f728ba39/conf/mpidistutils.py",
line 1255, in config_extension
#6 14.16 configure(ext, config_cmd)
#6 14.16 File "<string>", line 188, in configure_dl
#6 14.16 File
"/tmp/pip-install-f_toa7f8/mpi4py_38c005ab88564a30a5f545a9f728ba39/conf/mpidistutils.py",
line 607, in check_library
#6 14.16 ok = self.try_link(body, headers, include_dirs,
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/command/config.py",
line 246, in try_link
#6 14.16 self._link(body, headers, include_dirs, libraries,
library_dirs, lang)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/command/config.py",
line 138, in _link
#6 14.16 self.compiler.link_executable(
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/ccompiler.py",
line 781, in link_executable
#6 14.16 self.link(
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/unixccompiler.py",
line 233, in link
#6 14.16 lib_opts = gen_lib_options(self, library_dirs,
runtime_library_dirs, libraries)
#6 14.16 File
"/tmp/pip-build-env-edy3kq5i/overlay/lib/python3.8/site-packages/setuptools/_distutils/ccompiler.py",
line
[1232](https://github.com/apache/airflow/actions/runs/8666405114/job/23769539549?pr=38905#step:9:1233),
in gen_lib_options
#6 14.16
lib_opts.extend(always_iterable(compiler.runtime_library_dir_option(dir)))
#6 14.16 File
"/tmp/pip-install-f_toa7f8/mpi4py_38c005ab88564a30a5f545a9f728ba39/conf/mpidistutils.py",
line 68, in rpath_option
#6 14.16 if option.startswith('-R'):
#6 14.16 AttributeError: 'list' object has no attribute 'startswith'
#6 14.16 [end of output]
#6 14.16
#6 14.16 note: This error originates from a subprocess, and is likely not
a problem with pip.
#6 14.17 ERROR: Failed building wheel for mpi4py
```
Temporary mark it as XFAIL and allow to do it in the future for other
Dockerfiles examples
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