[arrow-cookbook] branch main updated: Update Arrow/PyArrow versions, fix build errors (#225)

lidavidm Wed, 06 Jul 2022 11:53:47 -0700

This is an automated email from the ASF dual-hosted git repository.

lidavidm pushed a commit to branch main
in repository https://gitbox.apache.org/repos/asf/arrow-cookbook.git



The following commit(s) were added to refs/heads/main by this push:
     new a1aa36d  Update Arrow/PyArrow versions, fix build errors (#225)
a1aa36d is described below

commit a1aa36d5ea61800958254d6b261147b0f40c7d2d
Author: David Li <[email protected]>
AuthorDate: Wed Jul 6 14:53:36 2022 -0400

    Update Arrow/PyArrow versions, fix build errors (#225)
    
    Fixes #224.
---
 Makefile                     |   4 +-
 cpp/code/CMakeLists.txt      |   6 +-
 cpp/code/common.cc           |   4 +-
 cpp/code/flight.cc           |  61 ++++++++--------
 cpp/conda-linux-64.lock      | 168 ++++++++++++++++++++++---------------------
 cpp/conda-linux-aarch64.lock | 166 +++++++++++++++++++++---------------------
 cpp/conda-osx-arm64.lock     | 154 +++++++++++++++++++--------------------
 cpp/environment.yml          |   6 +-
 cpp/requirements.txt         |   2 -
 python/requirements.txt      |   2 +-
 10 files changed, 288 insertions(+), 285 deletions(-)

diff --git a/Makefile b/Makefile
index 76e7d0b..26c1b96 100644
--- a/Makefile
+++ b/Makefile
@@ -59,11 +59,13 @@ rtest: rdeps
        cd ./r && Rscript ./scripts/test.R
 
 
+# Only release mode is supported because of a Protobuf WONTFIX bug
+# https://github.com/protocolbuffers/protobuf/issues/9947
 cpptest:
        @echo ">>> Running C++ Tests/Snippets <<<\n"
        rm -rf cpp/recipe-test-build
        mkdir cpp/recipe-test-build
-       cd cpp/recipe-test-build && cmake ../code -DCMAKE_BUILD_TYPE=Debug && 
cmake --build . && ctest --output-on-failure -j 1
+       cd cpp/recipe-test-build && cmake ../code -DCMAKE_BUILD_TYPE=Release && 
cmake --build . && ctest --output-on-failure -j 1
        mkdir -p cpp/build
        cp cpp/recipe-test-build/recipes_out.arrow cpp/build
 
diff --git a/cpp/code/CMakeLists.txt b/cpp/code/CMakeLists.txt
index 5b8f4b5..027483e 100644
--- a/cpp/code/CMakeLists.txt
+++ b/cpp/code/CMakeLists.txt
@@ -65,7 +65,7 @@ target_link_libraries(flight
 target_include_directories(flight PUBLIC ${CMAKE_CURRENT_BINARY_DIR})
 get_target_property(grpc_cpp_plugin_location gRPC::grpc_cpp_plugin LOCATION)
 protobuf_generate(TARGET flight LANGUAGE cpp PROTOS ${PROTO_FILES})
-protobuf_generate(TARGET flight LANGUAGE grpc 
-                  GENERATE_EXTENSIONS .grpc.pb.h .grpc.pb.cc 
+protobuf_generate(TARGET flight LANGUAGE grpc
+                  GENERATE_EXTENSIONS .grpc.pb.h .grpc.pb.cc
                   PLUGIN "protoc-gen-grpc=${grpc_cpp_plugin_location}"
-                  PROTOS ${PROTO_FILES})
\ No newline at end of file
+                  PROTOS ${PROTO_FILES})
diff --git a/cpp/code/common.cc b/cpp/code/common.cc
index 9a6532b..6c7fe25 100644
--- a/cpp/code/common.cc
+++ b/cpp/code/common.cc
@@ -76,9 +76,7 @@ arrow::Result<std::shared_ptr<arrow::Table>> ReadRecipeTable(
     const std::shared_ptr<arrow::io::RandomAccessFile>& in_file) {
   ARROW_ASSIGN_OR_RAISE(std::shared_ptr<arrow::ipc::RecordBatchStreamReader> 
reader,
                         arrow::ipc::RecordBatchStreamReader::Open(in_file));
-  std::shared_ptr<arrow::Table> table;
-  ARROW_RETURN_NOT_OK(reader->ReadAll(&table));
-  return table;
+  return reader->ToTable();
 }
 
 arrow::Result<std::shared_ptr<arrow::Table>> LoadExistingRecipeOutputTable(
diff --git a/cpp/code/flight.cc b/cpp/code/flight.cc
index 8eaabd5..43e6719 100644
--- a/cpp/code/flight.cc
+++ b/cpp/code/flight.cc
@@ -81,8 +81,7 @@ class ParquetStorageService : public 
arrow::flight::FlightServerBase {
                       std::unique_ptr<arrow::flight::FlightMetadataWriter>) 
override {
     ARROW_ASSIGN_OR_RAISE(auto file_info, 
FileInfoFromDescriptor(reader->descriptor()));
     ARROW_ASSIGN_OR_RAISE(auto sink, 
root_->OpenOutputStream(file_info.path()));
-    std::shared_ptr<arrow::Table> table;
-    ARROW_RETURN_NOT_OK(reader->ReadAll(&table));
+    ARROW_ASSIGN_OR_RAISE(std::shared_ptr<arrow::Table> table, 
reader->ToTable());
 
     ARROW_RETURN_NOT_OK(parquet::arrow::WriteTable(*table, 
arrow::default_memory_pool(),
                                                    sink, 
/*chunk_size=*/65536));
@@ -105,7 +104,7 @@ class ParquetStorageService : public 
arrow::flight::FlightServerBase {
     // when we exit this function
     std::vector<std::shared_ptr<arrow::RecordBatch>> batches;
     arrow::TableBatchReader batch_reader(*table);
-    ARROW_RETURN_NOT_OK(batch_reader.ReadAll(&batches));
+    ARROW_ASSIGN_OR_RAISE(batches, batch_reader.ToRecordBatches());
 
     ARROW_ASSIGN_OR_RAISE(auto owning_reader, arrow::RecordBatchReader::Make(
                                                   std::move(batches), 
table->schema()));
@@ -148,8 +147,8 @@ class ParquetStorageService : public 
arrow::flight::FlightServerBase {
     arrow::flight::FlightEndpoint endpoint;
     endpoint.ticket.ticket = file_info.base_name();
     arrow::flight::Location location;
-    ARROW_RETURN_NOT_OK(
-        arrow::flight::Location::ForGrpcTcp("localhost", port(), &location));
+    ARROW_ASSIGN_OR_RAISE(location,
+        arrow::flight::Location::ForGrpcTcp("localhost", port()));
     endpoint.locations.push_back(location);
 
     int64_t total_records = reader->parquet_reader()->metadata()->num_rows();
@@ -197,8 +196,8 @@ arrow::Status TestPutGetDelete() {
   auto root = 
std::make_shared<arrow::fs::SubTreeFileSystem>("./flight_datasets/", fs);
 
   arrow::flight::Location server_location;
-  ARROW_RETURN_NOT_OK(
-      arrow::flight::Location::ForGrpcTcp("0.0.0.0", 0, &server_location));
+  ARROW_ASSIGN_OR_RAISE(server_location,
+      arrow::flight::Location::ForGrpcTcp("0.0.0.0", 0));
 
   arrow::flight::FlightServerOptions options(server_location);
   auto server = std::unique_ptr<arrow::flight::FlightServerBase>(
@@ -209,11 +208,11 @@ arrow::Status TestPutGetDelete() {
 
   StartRecipe("ParquetStorageService::Connect");
   arrow::flight::Location location;
-  ARROW_RETURN_NOT_OK(
-      arrow::flight::Location::ForGrpcTcp("localhost", server->port(), 
&location));
+  ARROW_ASSIGN_OR_RAISE(location,
+      arrow::flight::Location::ForGrpcTcp("localhost", server->port()));
 
   std::unique_ptr<arrow::flight::FlightClient> client;
-  ARROW_RETURN_NOT_OK(arrow::flight::FlightClient::Connect(location, &client));
+  ARROW_ASSIGN_OR_RAISE(client, 
arrow::flight::FlightClient::Connect(location));
   rout << "Connected to " << location.ToString() << std::endl;
   EndRecipe("ParquetStorageService::Connect");
 
@@ -234,7 +233,9 @@ arrow::Status TestPutGetDelete() {
   // Start the RPC call
   std::unique_ptr<arrow::flight::FlightStreamWriter> writer;
   std::unique_ptr<arrow::flight::FlightMetadataReader> metadata_reader;
-  ARROW_RETURN_NOT_OK(client->DoPut(descriptor, schema, &writer, 
&metadata_reader));
+  ARROW_ASSIGN_OR_RAISE(auto put_stream, client->DoPut(descriptor, schema));
+  writer = std::move(put_stream.writer);
+  metadata_reader = std::move(put_stream.reader);
 
   // Upload data
   std::shared_ptr<arrow::RecordBatchReader> batch_reader;
@@ -255,21 +256,21 @@ arrow::Status TestPutGetDelete() {
 
   StartRecipe("ParquetStorageService::GetFlightInfo");
   std::unique_ptr<arrow::flight::FlightInfo> flight_info;
-  ARROW_RETURN_NOT_OK(client->GetFlightInfo(descriptor, &flight_info));
+  ARROW_ASSIGN_OR_RAISE(flight_info, client->GetFlightInfo(descriptor));
   rout << flight_info->descriptor().ToString() << std::endl;
   rout << "=== Schema ===" << std::endl;
   std::shared_ptr<arrow::Schema> info_schema;
   arrow::ipc::DictionaryMemo dictionary_memo;
-  ARROW_RETURN_NOT_OK(flight_info->GetSchema(&dictionary_memo, &info_schema));
+  ARROW_ASSIGN_OR_RAISE(info_schema, flight_info->GetSchema(&dictionary_memo));
   rout << info_schema->ToString() << std::endl;
   rout << "==============" << std::endl;
   EndRecipe("ParquetStorageService::GetFlightInfo");
 
   StartRecipe("ParquetStorageService::DoGet");
   std::unique_ptr<arrow::flight::FlightStreamReader> stream;
-  ARROW_RETURN_NOT_OK(client->DoGet(flight_info->endpoints()[0].ticket, 
&stream));
+  ARROW_ASSIGN_OR_RAISE(stream, 
client->DoGet(flight_info->endpoints()[0].ticket));
   std::shared_ptr<arrow::Table> table;
-  ARROW_RETURN_NOT_OK(stream->ReadAll(&table));
+  ARROW_ASSIGN_OR_RAISE(table, stream->ToTable());
   arrow::PrettyPrintOptions print_options(/*indent=*/0, /*window=*/2);
   ARROW_RETURN_NOT_OK(arrow::PrettyPrint(*table, print_options, &rout));
   EndRecipe("ParquetStorageService::DoGet");
@@ -278,22 +279,22 @@ arrow::Status TestPutGetDelete() {
   arrow::flight::Action action{"drop_dataset",
                                
arrow::Buffer::FromString("airquality.parquet")};
   std::unique_ptr<arrow::flight::ResultStream> results;
-  ARROW_RETURN_NOT_OK(client->DoAction(action, &results));
+  ARROW_ASSIGN_OR_RAISE(results, client->DoAction(action));
   rout << "Deleted dataset" << std::endl;
   EndRecipe("ParquetStorageService::DoAction");
 
   StartRecipe("ParquetStorageService::ListFlights");
   std::unique_ptr<arrow::flight::FlightListing> listing;
-  ARROW_RETURN_NOT_OK(client->ListFlights(&listing));
+  ARROW_ASSIGN_OR_RAISE(listing, client->ListFlights());
   while (true) {
     std::unique_ptr<arrow::flight::FlightInfo> flight_info;
-    ARROW_RETURN_NOT_OK(listing->Next(&flight_info));
+    ARROW_ASSIGN_OR_RAISE(flight_info, listing->Next());
     if (!flight_info) break;
     rout << flight_info->descriptor().ToString() << std::endl;
     rout << "=== Schema ===" << std::endl;
     std::shared_ptr<arrow::Schema> info_schema;
     arrow::ipc::DictionaryMemo dictionary_memo;
-    ARROW_RETURN_NOT_OK(flight_info->GetSchema(&dictionary_memo, 
&info_schema));
+    ARROW_ASSIGN_OR_RAISE(info_schema, 
flight_info->GetSchema(&dictionary_memo));
     rout << info_schema->ToString() << std::endl;
     rout << "==============" << std::endl;
   }
@@ -315,8 +316,8 @@ arrow::Status TestClientOptions() {
   auto root = 
std::make_shared<arrow::fs::SubTreeFileSystem>("./flight_datasets/", fs);
 
   arrow::flight::Location server_location;
-  ARROW_RETURN_NOT_OK(
-      arrow::flight::Location::ForGrpcTcp("0.0.0.0", 0, &server_location));
+  ARROW_ASSIGN_OR_RAISE(server_location,
+      arrow::flight::Location::ForGrpcTcp("0.0.0.0", 0));
 
   arrow::flight::FlightServerOptions options(server_location);
   auto server = std::unique_ptr<arrow::flight::FlightServerBase>(
@@ -329,18 +330,18 @@ arrow::Status TestClientOptions() {
   
client_options.generic_options.emplace_back(GRPC_ARG_MAX_SEND_MESSAGE_LENGTH, 
2);
 
   arrow::flight::Location location;
-  ARROW_RETURN_NOT_OK(
-      arrow::flight::Location::ForGrpcTcp("localhost", server->port(), 
&location));
+  ARROW_ASSIGN_OR_RAISE(location,
+      arrow::flight::Location::ForGrpcTcp("localhost", server->port()));
 
   std::unique_ptr<arrow::flight::FlightClient> client;
-  ARROW_RETURN_NOT_OK(  // pass client_options into Connect()
-      arrow::flight::FlightClient::Connect(location, client_options, &client));
+  // pass client_options into Connect()
+  ARROW_ASSIGN_OR_RAISE(client,
+      arrow::flight::FlightClient::Connect(location, client_options));
   rout << "Connected to " << location.ToString() << std::endl;
   EndRecipe("TestClientOptions::Connect");
 
   auto descriptor = 
arrow::flight::FlightDescriptor::Path({"airquality.parquet"});
-  std::unique_ptr<arrow::flight::FlightInfo> flight_info;
-  return client->GetFlightInfo(descriptor, &flight_info);
+  return client->GetFlightInfo(descriptor).status();
 }
 
 arrow::Status TestCustomGrpcImpl() {
@@ -352,8 +353,8 @@ arrow::Status TestCustomGrpcImpl() {
 
   StartRecipe("CustomGrpcImpl::StartServer");
   arrow::flight::Location server_location;
-  ARROW_RETURN_NOT_OK(
-      arrow::flight::Location::ForGrpcTcp("0.0.0.0", 5000, &server_location));
+  ARROW_ASSIGN_OR_RAISE(server_location,
+      arrow::flight::Location::ForGrpcTcp("0.0.0.0", 5000));
 
   arrow::flight::FlightServerOptions options(server_location);
   auto server = std::unique_ptr<arrow::flight::FlightServerBase>(
@@ -398,4 +399,4 @@ TEST(ParquetStorageServiceTest, TestClientOptions) {
   ASSERT_EQ(status.code(), arrow::StatusCode::Invalid);
   ASSERT_THAT(status.message(), testing::HasSubstr("resource exhausted"));
 }
-TEST(ParquetStorageServiceTest, TestCustomGrpcImpl) { 
ASSERT_OK(TestCustomGrpcImpl()); }
\ No newline at end of file
+TEST(ParquetStorageServiceTest, TestCustomGrpcImpl) { 
ASSERT_OK(TestCustomGrpcImpl()); }
diff --git a/cpp/conda-linux-64.lock b/cpp/conda-linux-64.lock
index acd8d7e..59f6638 100644
--- a/cpp/conda-linux-64.lock
+++ b/cpp/conda-linux-64.lock
@@ -1,130 +1,132 @@
 # Generated by conda-lock.
 # platform: linux-64
-# input_hash: 961d5bf5a1d8489cdc3d6b85eae93769c022e5ba6abebe1f3afbb9e9051a78f5
+# input_hash: 394bc8407fdbcac5cd4dcbdc5a61ef3609304ff172eb716068a09001b2dd715c
 @EXPLICIT
 
https://conda.anaconda.org/conda-forge/linux-64/_libgcc_mutex-0.1-conda_forge.tar.bz2#d7c89558ba9fa0495403155b64376d81
-https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2021.10.8-ha878542_0.tar.bz2#575611b8a84f45960e87722eeb51fa26
+https://conda.anaconda.org/conda-forge/linux-64/ca-certificates-2022.6.15-ha878542_0.tar.bz2#c320890f77fd1d617fa876e0982002c2
 
https://conda.anaconda.org/conda-forge/noarch/kernel-headers_linux-64-2.6.32-he073ed8_15.tar.bz2#5dd5127afd710f91f6a75821bac0a4f0
 
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-https://conda.anaconda.org/conda-forge/linux-64/libgcc-devel_linux-64-10.3.0-he6cfe16_12.tar.bz2#931483f6dd8ea66149dc7c72bbd10c85
-https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-11.2.0-h5c6108e_12.tar.bz2#f547bf125ab234cec9c89491b262fc2f
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+https://conda.anaconda.org/conda-forge/linux-64/libgcc-devel_linux-64-10.3.0-he6cfe16_16.tar.bz2#878a30aba0574e69bd920c55f243aa06
+https://conda.anaconda.org/conda-forge/linux-64/libgfortran5-12.1.0-hdcd56e2_16.tar.bz2#b02605b875559ff99f04351fd5040760
+https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-devel_linux-64-10.3.0-he6cfe16_16.tar.bz2#baae55f62968547a3731cb668736f611
+https://conda.anaconda.org/conda-forge/linux-64/libstdcxx-ng-12.1.0-ha89aaad_16.tar.bz2#6f5ba041a41eb102a1027d9e68731be7
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+https://conda.anaconda.org/conda-forge/linux-64/libgfortran-ng-12.1.0-h69a702a_16.tar.bz2#6bf15e29a20f614b18ae89368260d0a2
+https://conda.anaconda.org/conda-forge/linux-64/libgomp-12.1.0-h8d9b700_16.tar.bz2#f013cf7749536ce43d82afbffdf499ab
 
https://conda.anaconda.org/conda-forge/noarch/sysroot_linux-64-2.12-he073ed8_15.tar.bz2#66c192522eacf5bb763568b4e415d133
-https://conda.anaconda.org/conda-forge/linux-64/_openmp_mutex-4.5-1_gnu.tar.bz2#561e277319a41d4f24f5c05a9ef63c04
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+https://conda.anaconda.org/conda-forge/linux-64/libopenblas-0.3.20-pthreads_h78a6416_0.tar.bz2#9b6d0781953c9e353faee494336cc229
+https://conda.anaconda.org/conda-forge/linux-64/libsanitizer-10.3.0-h26c7422_16.tar.bz2#4076c395c7fa53cd708949e4be48154e
 
https://conda.anaconda.org/conda-forge/linux-64/libutf8proc-2.7.0-h7f98852_0.tar.bz2#913570ed14b42cf48ccbba364af20302
 
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diff --git a/cpp/conda-linux-aarch64.lock b/cpp/conda-linux-aarch64.lock
index cd1cc35..5766c05 100644
--- a/cpp/conda-linux-aarch64.lock
+++ b/cpp/conda-linux-aarch64.lock
@@ -1,129 +1,131 @@
 # Generated by conda-lock.
 # platform: linux-aarch64
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diff --git a/cpp/conda-osx-arm64.lock b/cpp/conda-osx-arm64.lock
index 5b94b6c..fc7eaef 100644
--- a/cpp/conda-osx-arm64.lock
+++ b/cpp/conda-osx-arm64.lock
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diff --git a/cpp/environment.yml b/cpp/environment.yml
index de2058e..948bb69 100644
--- a/cpp/environment.yml
+++ b/cpp/environment.yml
@@ -4,9 +4,9 @@ channels:
 dependencies:
   - python=3.9
   - compilers
-  - arrow-cpp >=7,<8
+  - arrow-cpp >=8,<9
   - sphinx
   - gtest
   - gmock
-  - pyarrow >=7,<8
-  - clang-tools
\ No newline at end of file
+  - pyarrow >=8,<9
+  - clang-tools
diff --git a/cpp/requirements.txt b/cpp/requirements.txt
deleted file mode 100644
index 4b9f125..0000000
--- a/cpp/requirements.txt
+++ /dev/null
@@ -1,2 +0,0 @@
-Sphinx>=4.0.2
-pyarrow>=4.0.0
diff --git a/python/requirements.txt b/python/requirements.txt
index 4167b52..22b7050 100644
--- a/python/requirements.txt
+++ b/python/requirements.txt
@@ -1,3 +1,3 @@
 Sphinx>=4.0.2
-pyarrow>=4.0.0
+pyarrow>=8.0.0
 pandas>=1.2.5

[arrow-cookbook] branch main updated: Update Arrow/PyArrow versions, fix build errors (#225)

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