See <https://builds.apache.org/job/beam_PerformanceTests_Python/468/display/redirect?page=changes>
Changes: [kenn] Add standalone version of seed job [altay] Created Java snippets file [kenn] Unit test to repro NPE in PTransformTranslation [kenn] Do not crash when RawPTransform has null spec [chamikara] Avoids generating proto files for Windows if grpcio-tools is not [chamikara] Adding lull tracking for python sampler ------------------------------------------ Started by timer [EnvInject] - Loading node environment variables. Building remotely on beam7 (beam) in workspace <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/> > git rev-parse --is-inside-work-tree # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/apache/beam.git # timeout=10 Fetching upstream changes from https://github.com/apache/beam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/apache/beam.git > +refs/heads/*:refs/remotes/origin/* > +refs/pull/${ghprbPullId}/*:refs/remotes/origin/pr/${ghprbPullId}/* > git rev-parse origin/master^{commit} # timeout=10 Checking out Revision 49c3927905d606990ea1d36f1dea0a8c86c11f30 (origin/master) Commit message: "This closes #3936" > git config core.sparsecheckout # timeout=10 > git checkout -f 49c3927905d606990ea1d36f1dea0a8c86c11f30 > git rev-list 3360b1f68e8ad3cb63fbb65c94ac3ed06f9b3ee9 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 [EnvInject] - Executing scripts and injecting environment variables after the SCM step. [EnvInject] - Injecting as environment variables the properties content SPARK_LOCAL_IP=127.0.0.1 [EnvInject] - Variables injected successfully. [beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins4382114150302897002.sh + rm -rf PerfKitBenchmarker [beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins4233578133467752264.sh + git clone https://github.com/GoogleCloudPlatform/PerfKitBenchmarker.git Cloning into 'PerfKitBenchmarker'... [beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins1255705823327773009.sh + pip install --user -r PerfKitBenchmarker/requirements.txt Requirement already satisfied: absl-py in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 14)) Requirement already satisfied: jinja2>=2.7 in /usr/local/lib/python2.7/dist-packages (from -r PerfKitBenchmarker/requirements.txt (line 15)) Requirement already satisfied: setuptools in /usr/lib/python2.7/dist-packages (from -r PerfKitBenchmarker/requirements.txt (line 16)) Requirement already satisfied: colorlog[windows]==2.6.0 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 17)) Requirement already satisfied: blinker>=1.3 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 18)) Requirement already satisfied: futures>=3.0.3 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 19)) Requirement already satisfied: PyYAML==3.12 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 20)) Requirement already satisfied: pint>=0.7 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 21)) Requirement already satisfied: numpy in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 22)) Requirement already satisfied: functools32 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 23)) Requirement already satisfied: contextlib2>=0.5.1 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 24)) Requirement already satisfied: six in /home/jenkins/.local/lib/python2.7/site-packages (from absl-py->-r PerfKitBenchmarker/requirements.txt (line 14)) Requirement already satisfied: MarkupSafe>=0.23 in /usr/local/lib/python2.7/dist-packages (from jinja2>=2.7->-r PerfKitBenchmarker/requirements.txt (line 15)) Requirement already satisfied: colorama; extra == "windows" in /usr/lib/python2.7/dist-packages (from colorlog[windows]==2.6.0->-r PerfKitBenchmarker/requirements.txt (line 17)) /usr/local/lib/python2.7/dist-packages/pip/_vendor/requests/packages/urllib3/util/ssl_.py:318: SNIMissingWarning: An HTTPS request has been made, but the SNI (Subject Name Indication) extension to TLS is not available on this platform. This may cause the server to present an incorrect TLS certificate, which can cause validation failures. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/security.html#snimissingwarning. SNIMissingWarning /usr/local/lib/python2.7/dist-packages/pip/_vendor/requests/packages/urllib3/util/ssl_.py:122: InsecurePlatformWarning: A true SSLContext object is not available. This prevents urllib3 from configuring SSL appropriately and may cause certain SSL connections to fail. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/security.html#insecureplatformwarning. InsecurePlatformWarning [beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins8021248950218467075.sh + pip install --user -e 'sdks/python/[gcp,test]' Obtaining file://<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/sdks/python> Requirement already satisfied: avro<2.0.0,>=1.8.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: crcmod<2.0,>=1.7 in /usr/lib/python2.7/dist-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: dill==0.2.6 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: grpcio<2.0,>=1.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: httplib2<0.10,>=0.8 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: mock<3.0.0,>=1.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: oauth2client<4.0.0,>=2.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: protobuf<=3.3.0,>=3.2.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: pyyaml<4.0.0,>=3.12 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: six<1.11,>=1.9 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: typing<3.7.0,>=3.6.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: google-apitools<=0.5.11,>=0.5.10 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: proto-google-cloud-datastore-v1<=0.90.4,>=0.90.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: googledatastore==7.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: google-cloud-pubsub==0.26.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: google-cloud-bigquery==0.25.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: pyhamcrest<2.0,>=1.9 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: futures>=2.2.0 in /home/jenkins/.local/lib/python2.7/site-packages (from grpcio<2.0,>=1.0->apache-beam==2.3.0.dev) Requirement already satisfied: enum34>=1.0.4 in /home/jenkins/.local/lib/python2.7/site-packages (from grpcio<2.0,>=1.0->apache-beam==2.3.0.dev) Requirement already satisfied: funcsigs>=1; python_version < "3.3" in /home/jenkins/.local/lib/python2.7/site-packages (from mock<3.0.0,>=1.0.1->apache-beam==2.3.0.dev) Requirement already satisfied: pbr>=0.11 in /home/jenkins/.local/lib/python2.7/site-packages (from mock<3.0.0,>=1.0.1->apache-beam==2.3.0.dev) Requirement already satisfied: pyasn1>=0.1.7 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client<4.0.0,>=2.0.1->apache-beam==2.3.0.dev) Requirement already satisfied: pyasn1-modules>=0.0.5 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client<4.0.0,>=2.0.1->apache-beam==2.3.0.dev) Requirement already satisfied: rsa>=3.1.4 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client<4.0.0,>=2.0.1->apache-beam==2.3.0.dev) Requirement already satisfied: setuptools in /usr/lib/python2.7/dist-packages (from protobuf<=3.3.0,>=3.2.0->apache-beam==2.3.0.dev) Requirement already satisfied: googleapis-common-protos<2.0dev,>=1.5.2 in /home/jenkins/.local/lib/python2.7/site-packages (from proto-google-cloud-datastore-v1<=0.90.4,>=0.90.0->apache-beam==2.3.0.dev) Requirement already satisfied: google-cloud-core<0.26dev,>=0.25.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: google-auth-httplib2 in /home/jenkins/.local/lib/python2.7/site-packages (from google-cloud-core<0.26dev,>=0.25.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: google-auth<2.0.0dev,>=0.4.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-cloud-core<0.26dev,>=0.25.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: google-gax<0.16dev,>=0.15.7 in /home/jenkins/.local/lib/python2.7/site-packages (from gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: proto-google-cloud-pubsub-v1[grpc]<0.16dev,>=0.15.4 in /home/jenkins/.local/lib/python2.7/site-packages (from gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: grpc-google-iam-v1<0.12dev,>=0.11.1 in /home/jenkins/.local/lib/python2.7/site-packages (from gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: cachetools>=2.0.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-auth<2.0.0dev,>=0.4.0->google-cloud-core<0.26dev,>=0.25.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: future<0.17dev,>=0.16.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: ply==3.8 in /home/jenkins/.local/lib/python2.7/site-packages (from google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: requests<3.0dev,>=2.13.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: idna<2.6,>=2.5 in /home/jenkins/.local/lib/python2.7/site-packages (from requests<3.0dev,>=2.13.0->google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: urllib3<1.22,>=1.21.1 in /home/jenkins/.local/lib/python2.7/site-packages (from requests<3.0dev,>=2.13.0->google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /home/jenkins/.local/lib/python2.7/site-packages (from requests<3.0dev,>=2.13.0->google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: certifi>=2017.4.17 in /home/jenkins/.local/lib/python2.7/site-packages (from requests<3.0dev,>=2.13.0->google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Installing collected packages: apache-beam Found existing installation: apache-beam 2.3.0.dev0 Uninstalling apache-beam-2.3.0.dev0: Successfully uninstalled apache-beam-2.3.0.dev0 Running setup.py develop for apache-beam Successfully installed apache-beam [beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins2172843834145575103.sh + python PerfKitBenchmarker/pkb.py --project=apache-beam-testing --dpb_log_level=INFO --maven_binary=/home/jenkins/tools/maven/latest/bin/mvn --bigquery_table=beam_performance.pkb_results --official=true --beam_sdk=python --benchmarks=beam_integration_benchmark --beam_it_args=--project=apache-beam-testing,--staging_location=gs://temp-storage-for-end-to-end-tests/staging-it,--temp_location=gs://temp-storage-for-end-to-end-tests/temp-it,--output=gs://temp-storage-for-end-to-end-tests/py-it-cloud/output 2017-10-20 02:24:04,658 0318a125 MainThread INFO Verbose logging to: /tmp/perfkitbenchmarker/runs/0318a125/pkb.log 2017-10-20 02:24:04,658 0318a125 MainThread INFO PerfKitBenchmarker version: v1.12.0-163-ge6dedae 2017-10-20 02:24:04,660 0318a125 MainThread INFO Flag values: --beam_sdk=python --beam_it_args=--project=apache-beam-testing,--staging_location=gs://temp-storage-for-end-to-end-tests/staging-it,--temp_location=gs://temp-storage-for-end-to-end-tests/temp-it,--output=gs://temp-storage-for-end-to-end-tests/py-it-cloud/output --maven_binary=/home/jenkins/tools/maven/latest/bin/mvn --project=apache-beam-testing --bigquery_table=beam_performance.pkb_results --official --dpb_log_level=INFO --benchmarks=beam_integration_benchmark 2017-10-20 02:24:05,182 0318a125 MainThread WARNING The key "flags" was not in the default config, but was in user overrides. This may indicate a typo. 2017-10-20 02:24:05,428 0318a125 MainThread beam_integration_benchmark(1/1) INFO Provisioning resources for benchmark beam_integration_benchmark 2017-10-20 02:24:05,434 0318a125 MainThread beam_integration_benchmark(1/1) INFO Preparing benchmark beam_integration_benchmark 2017-10-20 02:24:05,435 0318a125 MainThread beam_integration_benchmark(1/1) INFO Running: git clone https://github.com/apache/beam.git 2017-10-20 02:24:17,795 0318a125 MainThread beam_integration_benchmark(1/1) INFO Running: /home/jenkins/tools/maven/latest/bin/mvn clean install -DskipTests -Dcheckstyle.skip=true -Pdataflow-runner 2017-10-20 02:41:08,061 0318a125 MainThread beam_integration_benchmark(1/1) INFO Running benchmark beam_integration_benchmark 2017-10-20 02:41:08,099 0318a125 MainThread beam_integration_benchmark(1/1) INFO Running: python setup.py nosetests --tests=apache_beam.examples.wordcount_it_test --attr=IT --test-pipeline-options="--project=apache-beam-testing" "--staging_location=gs://temp-storage-for-end-to-end-tests/staging-it" "--temp_location=gs://temp-storage-for-end-to-end-tests/temp-it" "--output=gs://temp-storage-for-end-to-end-tests/py-it-cloud/output" --runner=TestDataflowRunner --sdk_location=/tmp/perfkitbenchmarker/runs/0318a125/beam/sdks/python/target/apache-beam-2.3.0.dev.tar.gz 2017-10-20 02:51:08,125 0318a125 Thread-4 ERROR IssueCommand timed out after 600 seconds. Killing command "python setup.py nosetests --tests=apache_beam.examples.wordcount_it_test --attr=IT --test-pipeline-options="--project=apache-beam-testing" "--staging_location=gs://temp-storage-for-end-to-end-tests/staging-it" "--temp_location=gs://temp-storage-for-end-to-end-tests/temp-it" "--output=gs://temp-storage-for-end-to-end-tests/py-it-cloud/output" --runner=TestDataflowRunner --sdk_location=/tmp/perfkitbenchmarker/runs/0318a125/beam/sdks/python/target/apache-beam-2.3.0.dev.tar.gz". 2017-10-20 02:51:08,153 0318a125 MainThread beam_integration_benchmark(1/1) INFO Ran python setup.py nosetests --tests=apache_beam.examples.wordcount_it_test --attr=IT --test-pipeline-options="--project=apache-beam-testing" "--staging_location=gs://temp-storage-for-end-to-end-tests/staging-it" "--temp_location=gs://temp-storage-for-end-to-end-tests/temp-it" "--output=gs://temp-storage-for-end-to-end-tests/py-it-cloud/output" --runner=TestDataflowRunner --sdk_location=/tmp/perfkitbenchmarker/runs/0318a125/beam/sdks/python/target/apache-beam-2.3.0.dev.tar.gz. Got return code (-9). STDOUT: running nosetests running egg_info writing requirements to apache_beam.egg-info/requires.txt writing apache_beam.egg-info/PKG-INFO writing top-level names to apache_beam.egg-info/top_level.txt writing dependency_links to apache_beam.egg-info/dependency_links.txt writing entry points to apache_beam.egg-info/entry_points.txt reading manifest file 'apache_beam.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'apache_beam.egg-info/SOURCES.txt' STDERR: test_wordcount_fnapi_it (apache_beam.examples.wordcount_it_test.WordCountIT) ... /tmp/perfkitbenchmarker/runs/0318a125/beam/sdks/python/apache_beam/io/gcp/gcsio.py:122: DeprecationWarning: object() takes no parameters super(GcsIO, cls).__new__(cls, storage_client)) /tmp/perfkitbenchmarker/runs/0318a125/beam/sdks/python/apache_beam/coders/typecoders.py:134: UserWarning: Using fallback coder for typehint: Any. warnings.warn('Using fallback coder for typehint: %r.' % typehint) 2017-10-20 02:51:08,154 0318a125 MainThread beam_integration_benchmark(1/1) ERROR Error during benchmark beam_integration_benchmark Traceback (most recent call last): File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,> line 565, in RunBenchmark DoRunPhase(spec, collector, detailed_timer) File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,> line 478, in DoRunPhase samples = spec.BenchmarkRun(spec) File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/linux_benchmarks/beam_integration_benchmark.py";,> line 159, in Run job_type=job_type) File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/providers/gcp/gcp_dpb_dataflow.py";,> line 90, in SubmitJob assert retcode == 0, "Integration Test Failed." AssertionError: Integration Test Failed. 2017-10-20 02:51:08,248 0318a125 MainThread beam_integration_benchmark(1/1) INFO Cleaning up benchmark beam_integration_benchmark 2017-10-20 02:51:08,250 0318a125 MainThread beam_integration_benchmark(1/1) ERROR Benchmark 1/1 beam_integration_benchmark (UID: beam_integration_benchmark0) failed. Execution will continue. 2017-10-20 02:51:08,313 0318a125 MainThread INFO Benchmark run statuses: --------------------------------------------------------------- Name UID Status --------------------------------------------------------------- beam_integration_benchmark beam_integration_benchmark0 FAILED --------------------------------------------------------------- Success rate: 0.00% (0/1) 2017-10-20 02:51:08,314 0318a125 MainThread INFO Complete logs can be found at: /tmp/perfkitbenchmarker/runs/0318a125/pkb.log 2017-10-20 02:51:08,314 0318a125 MainThread INFO Completion statuses can be found at: /tmp/perfkitbenchmarker/runs/0318a125/completion_statuses.json Build step 'Execute shell' marked build as failure Not sending mail to unregistered user [email protected]
