See <https://builds.apache.org/job/beam_PerformanceTests_Spark/1143/display/redirect?page=changes>
Changes: [altay] Update wordcount fnapi example to use now supported save_main_session [chamikara] Update BigTable client version [ehudm] Initial implementation of HadoopFileSsytem. ------------------------------------------ Started by timer [EnvInject] - Loading node environment variables. Building remotely on beam2 (beam) in workspace <https://builds.apache.org/job/beam_PerformanceTests_Spark/ws/> > git rev-parse --is-inside-work-tree # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/apache/beam.git # timeout=10 Fetching upstream changes from https://github.com/apache/beam.git > git --version # timeout=10 > git fetch --tags --progress https://github.com/apache/beam.git > +refs/heads/*:refs/remotes/origin/* > +refs/pull/${ghprbPullId}/*:refs/remotes/origin/pr/${ghprbPullId}/* > git rev-parse origin/master^{commit} # timeout=10 Checking out Revision 02e4fb11b63f3088521212b81f02ded324e48289 (origin/master) > git config core.sparsecheckout # timeout=10 > git checkout -f 02e4fb11b63f3088521212b81f02ded324e48289 Commit message: "Merge pull request #4303 from chamikaramj/update_bigtable_version" > git rev-list 4570fac6bb2bede0f334cef4e86a1e739d1e6b7e # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 [EnvInject] - Executing scripts and injecting environment variables after the SCM step. [EnvInject] - Injecting as environment variables the properties content SPARK_LOCAL_IP=127.0.0.1 [EnvInject] - Variables injected successfully. [beam_PerformanceTests_Spark] $ /bin/bash -xe /tmp/jenkins3809579731707817491.sh + rm -rf PerfKitBenchmarker [beam_PerformanceTests_Spark] $ /bin/bash -xe /tmp/jenkins1857944367155467866.sh + git clone https://github.com/GoogleCloudPlatform/PerfKitBenchmarker.git Cloning into 'PerfKitBenchmarker'... [beam_PerformanceTests_Spark] $ /bin/bash -xe /tmp/jenkins1386011100101962125.sh + pip install --user -r PerfKitBenchmarker/requirements.txt Requirement already satisfied: absl-py in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 14)) Requirement already satisfied: jinja2>=2.7 in /usr/local/lib/python2.7/dist-packages (from -r PerfKitBenchmarker/requirements.txt (line 15)) Requirement already satisfied: setuptools in /usr/lib/python2.7/dist-packages (from -r PerfKitBenchmarker/requirements.txt (line 16)) Requirement already satisfied: colorlog[windows]==2.6.0 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 17)) Requirement already satisfied: blinker>=1.3 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 18)) Requirement already satisfied: futures>=3.0.3 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 19)) Requirement already satisfied: PyYAML==3.12 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 20)) Requirement already satisfied: pint>=0.7 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 21)) Requirement already satisfied: numpy in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 22)) Requirement already satisfied: functools32 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 23)) Requirement already satisfied: contextlib2>=0.5.1 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 24)) Requirement already satisfied: pywinrm in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: six in /home/jenkins/.local/lib/python2.7/site-packages (from absl-py->-r PerfKitBenchmarker/requirements.txt (line 14)) Requirement already satisfied: MarkupSafe in /usr/local/lib/python2.7/dist-packages (from jinja2>=2.7->-r PerfKitBenchmarker/requirements.txt (line 15)) Requirement already satisfied: colorama; extra == "windows" in /usr/lib/python2.7/dist-packages (from colorlog[windows]==2.6.0->-r PerfKitBenchmarker/requirements.txt (line 17)) Requirement already satisfied: xmltodict in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: requests-ntlm>=0.3.0 in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: requests>=2.9.1 in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: ntlm-auth>=1.0.2 in /home/jenkins/.local/lib/python2.7/site-packages (from requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: cryptography>=1.3 in /home/jenkins/.local/lib/python2.7/site-packages (from requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: idna<2.6,>=2.5 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: urllib3<1.22,>=1.21.1 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: certifi>=2017.4.17 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: cffi>=1.7; platform_python_implementation != "PyPy" in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: enum34; python_version < "3" in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: asn1crypto>=0.21.0 in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: ipaddress; python_version < "3" in /usr/local/lib/python2.7/dist-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: pycparser in /home/jenkins/.local/lib/python2.7/site-packages (from cffi>=1.7; platform_python_implementation != "PyPy"->cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) [beam_PerformanceTests_Spark] $ /bin/bash -xe /tmp/jenkins4713767317028394987.sh + pip install --user -e 'src/sdks/python/[gcp,test]' Obtaining file://<https://builds.apache.org/job/beam_PerformanceTests_Spark/ws/src/sdks/python> Requirement already satisfied: avro<2.0.0,>=1.8.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: crcmod<2.0,>=1.7 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: dill==0.2.6 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: grpcio<2,>=1.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: httplib2<0.10,>=0.8 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: mock<3.0.0,>=1.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: oauth2client<4.0.0,>=2.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Collecting protobuf<4,>=3.5.0.post1 (from apache-beam==2.3.0.dev) /usr/local/lib/python2.7/dist-packages/pip/_vendor/requests/packages/urllib3/util/ssl_.py:318: SNIMissingWarning: An HTTPS request has been made, but the SNI (Subject Name Indication) extension to TLS is not available on this platform. This may cause the server to present an incorrect TLS certificate, which can cause validation failures. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/security.html#snimissingwarning. SNIMissingWarning /usr/local/lib/python2.7/dist-packages/pip/_vendor/requests/packages/urllib3/util/ssl_.py:122: InsecurePlatformWarning: A true SSLContext object is not available. This prevents urllib3 from configuring SSL appropriately and may cause certain SSL connections to fail. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/security.html#insecureplatformwarning. InsecurePlatformWarning Using cached protobuf-3.5.0.post1-cp27-cp27mu-manylinux1_x86_64.whl Requirement already satisfied: pyyaml<4.0.0,>=3.12 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: pyvcf<0.7.0,>=0.6.8 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: six<1.11,>=1.9 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: typing<3.7.0,>=3.6.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: futures<4.0.0,>=3.1.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Collecting hdfs3<0.4.0,>=0.3.0 (from apache-beam==2.3.0.dev) Downloading hdfs3-0.3.0-py2.py3-none-any.whl Requirement already satisfied: google-apitools<=0.5.11,>=0.5.10 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: proto-google-cloud-datastore-v1<=0.90.4,>=0.90.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: googledatastore==7.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: google-cloud-pubsub==0.26.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: google-cloud-bigquery==0.25.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: pyhamcrest<2.0,>=1.9 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.3.0.dev) Requirement already satisfied: enum34>=1.0.4 in /home/jenkins/.local/lib/python2.7/site-packages (from grpcio<2,>=1.0->apache-beam==2.3.0.dev) Requirement already satisfied: funcsigs>=1; python_version < "3.3" in /home/jenkins/.local/lib/python2.7/site-packages (from mock<3.0.0,>=1.0.1->apache-beam==2.3.0.dev) Requirement already satisfied: pbr>=0.11 in /home/jenkins/.local/lib/python2.7/site-packages (from mock<3.0.0,>=1.0.1->apache-beam==2.3.0.dev) Requirement already satisfied: pyasn1>=0.1.7 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client<4.0.0,>=2.0.1->apache-beam==2.3.0.dev) Requirement already satisfied: pyasn1-modules>=0.0.5 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client<4.0.0,>=2.0.1->apache-beam==2.3.0.dev) Requirement already satisfied: rsa>=3.1.4 in /home/jenkins/.local/lib/python2.7/site-packages (from oauth2client<4.0.0,>=2.0.1->apache-beam==2.3.0.dev) Requirement already satisfied: setuptools in /usr/lib/python2.7/dist-packages (from protobuf<4,>=3.5.0.post1->apache-beam==2.3.0.dev) Requirement already satisfied: googleapis-common-protos<2.0dev,>=1.5.2 in /home/jenkins/.local/lib/python2.7/site-packages (from proto-google-cloud-datastore-v1<=0.90.4,>=0.90.0->apache-beam==2.3.0.dev) Requirement already satisfied: google-cloud-core<0.26dev,>=0.25.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: google-auth<2.0.0dev,>=0.4.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-cloud-core<0.26dev,>=0.25.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: google-auth-httplib2 in /home/jenkins/.local/lib/python2.7/site-packages (from google-cloud-core<0.26dev,>=0.25.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: google-gax<0.16dev,>=0.15.7 in /home/jenkins/.local/lib/python2.7/site-packages (from gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: proto-google-cloud-pubsub-v1[grpc]<0.16dev,>=0.15.4 in /home/jenkins/.local/lib/python2.7/site-packages (from gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: grpc-google-iam-v1<0.12dev,>=0.11.1 in /home/jenkins/.local/lib/python2.7/site-packages (from gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: cachetools>=2.0.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-auth<2.0.0dev,>=0.4.0->google-cloud-core<0.26dev,>=0.25.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: future<0.17dev,>=0.16.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: ply==3.8 in /home/jenkins/.local/lib/python2.7/site-packages (from google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: requests<3.0dev,>=2.13.0 in /home/jenkins/.local/lib/python2.7/site-packages (from google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: idna<2.6,>=2.5 in /home/jenkins/.local/lib/python2.7/site-packages (from requests<3.0dev,>=2.13.0->google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: urllib3<1.22,>=1.21.1 in /home/jenkins/.local/lib/python2.7/site-packages (from requests<3.0dev,>=2.13.0->google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /home/jenkins/.local/lib/python2.7/site-packages (from requests<3.0dev,>=2.13.0->google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Requirement already satisfied: certifi>=2017.4.17 in /home/jenkins/.local/lib/python2.7/site-packages (from requests<3.0dev,>=2.13.0->google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.3.0.dev) Installing collected packages: protobuf, hdfs3, apache-beam Found existing installation: protobuf 3.3.0 Uninstalling protobuf-3.3.0: Successfully uninstalled protobuf-3.3.0 Running setup.py develop for apache-beam Successfully installed apache-beam hdfs3-0.3.0 protobuf-3.5.0.post1 [beam_PerformanceTests_Spark] $ /bin/bash -xe /tmp/jenkins8188746282773755334.sh + python PerfKitBenchmarker/pkb.py --project=apache-beam-testing --dpb_log_level=INFO --maven_binary=/home/jenkins/tools/maven/latest/bin/mvn --bigquery_table=beam_performance.pkb_results --official=true --benchmarks=dpb_wordcount_benchmark --dpb_wordcount_input=/etc/hosts --config_override=dpb_wordcount_benchmark.dpb_service.service_type=dataproc Traceback (most recent call last): File "PerfKitBenchmarker/pkb.py", line 21, in <module> sys.exit(Main()) File "<https://builds.apache.org/job/beam_PerformanceTests_Spark/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,> line 854, in Main SetUpPKB() File "<https://builds.apache.org/job/beam_PerformanceTests_Spark/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py";,> line 724, in SetUpPKB vm_util.GenTempDir() File "<https://builds.apache.org/job/beam_PerformanceTests_Spark/ws/PerfKitBenchmarker/perfkitbenchmarker/vm_util.py";,> line 121, in GenTempDir temp_dir.CreateTemporaryDirectories() File "<https://builds.apache.org/job/beam_PerformanceTests_Spark/ws/PerfKitBenchmarker/perfkitbenchmarker/temp_dir.py";,> line 62, in CreateTemporaryDirectories os.makedirs(path) File "/usr/lib/python2.7/os.py", line 157, in makedirs mkdir(name, mode) OSError: [Errno 13] Permission denied: '/tmp/perfkitbenchmarker/runs/ef989558' Build step 'Execute shell' marked build as failure
