See <https://builds.apache.org/job/beam_PerformanceTests_Python/1140/display/redirect?page=changes>
Changes: [shoyer] [BEAM-3956] Preserve stacktraces for Python exceptions [XuMingmin] KafkaIO : fix a typo in method name. (#5106) ------------------------------------------ [...truncated 3.98 KB...] Cloning into 'PerfKitBenchmarker'... [beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins2156203211161947545.sh + .env/bin/pip install -r PerfKitBenchmarker/requirements.txt Requirement already satisfied: absl-py in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 14)) Requirement already satisfied: jinja2>=2.7 in /usr/local/lib/python2.7/dist-packages (from -r PerfKitBenchmarker/requirements.txt (line 15)) Requirement already satisfied: setuptools in ./.env/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 16)) Requirement already satisfied: colorlog[windows]==2.6.0 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 17)) Requirement already satisfied: blinker>=1.3 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 18)) Requirement already satisfied: futures>=3.0.3 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 19)) Requirement already satisfied: PyYAML==3.12 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 20)) Requirement already satisfied: pint>=0.7 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 21)) Collecting numpy==1.13.3 (from -r PerfKitBenchmarker/requirements.txt (line 22)) <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/.env/local/lib/python2.7/site-packages/pip/_vendor/urllib3/util/ssl_.py>:339: SNIMissingWarning: An HTTPS request has been made, but the SNI (Subject Name Indication) extension to TLS is not available on this platform. This may cause the server to present an incorrect TLS certificate, which can cause validation failures. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings SNIMissingWarning <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/.env/local/lib/python2.7/site-packages/pip/_vendor/urllib3/util/ssl_.py>:137: InsecurePlatformWarning: A true SSLContext object is not available. This prevents urllib3 from configuring SSL appropriately and may cause certain SSL connections to fail. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings InsecurePlatformWarning Using cached https://files.pythonhosted.org/packages/eb/be/737f3df5806192ac4096e549e48c8c76cfaa2fb880a1c62a7bb085adaa9b/numpy-1.13.3-cp27-cp27mu-manylinux1_x86_64.whl Requirement already satisfied: functools32 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 23)) Requirement already satisfied: contextlib2>=0.5.1 in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 24)) Requirement already satisfied: pywinrm in /home/jenkins/.local/lib/python2.7/site-packages (from -r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: six in /home/jenkins/.local/lib/python2.7/site-packages (from absl-py->-r PerfKitBenchmarker/requirements.txt (line 14)) Requirement already satisfied: MarkupSafe>=0.23 in /usr/local/lib/python2.7/dist-packages (from jinja2>=2.7->-r PerfKitBenchmarker/requirements.txt (line 15)) Requirement already satisfied: colorama; extra == "windows" in /usr/lib/python2.7/dist-packages (from colorlog[windows]==2.6.0->-r PerfKitBenchmarker/requirements.txt (line 17)) Requirement already satisfied: xmltodict in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: requests-ntlm>=0.3.0 in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: requests>=2.9.1 in /home/jenkins/.local/lib/python2.7/site-packages (from pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: ntlm-auth>=1.0.2 in /home/jenkins/.local/lib/python2.7/site-packages (from requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: cryptography>=1.3 in /home/jenkins/.local/lib/python2.7/site-packages (from requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: idna<2.6,>=2.5 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: urllib3<1.22,>=1.21.1 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: chardet<3.1.0,>=3.0.2 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: certifi>=2017.4.17 in /home/jenkins/.local/lib/python2.7/site-packages (from requests>=2.9.1->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: cffi>=1.7; platform_python_implementation != "PyPy" in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: enum34; python_version < "3" in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: asn1crypto>=0.21.0 in /home/jenkins/.local/lib/python2.7/site-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: ipaddress; python_version < "3" in /usr/local/lib/python2.7/dist-packages (from cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Requirement already satisfied: pycparser in /home/jenkins/.local/lib/python2.7/site-packages (from cffi>=1.7; platform_python_implementation != "PyPy"->cryptography>=1.3->requests-ntlm>=0.3.0->pywinrm->-r PerfKitBenchmarker/requirements.txt (line 25)) Installing collected packages: numpy Found existing installation: numpy 1.12.1 Not uninstalling numpy at /home/jenkins/.local/lib/python2.7/site-packages, outside environment <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/.env> Successfully installed numpy-1.13.3 [beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins8843553392024119434.sh + .env/bin/pip install -e 'src/sdks/python/[gcp,test]' Obtaining file://<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/src/sdks/python> Requirement already satisfied: avro<2.0.0,>=1.8.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: crcmod<2.0,>=1.7 in /usr/lib/python2.7/dist-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: dill==0.2.6 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Collecting grpcio<2,>=1.8 (from apache-beam==2.5.0.dev0) <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/.env/local/lib/python2.7/site-packages/pip/_vendor/urllib3/util/ssl_.py>:339: SNIMissingWarning: An HTTPS request has been made, but the SNI (Subject Name Indication) extension to TLS is not available on this platform. This may cause the server to present an incorrect TLS certificate, which can cause validation failures. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings SNIMissingWarning <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/.env/local/lib/python2.7/site-packages/pip/_vendor/urllib3/util/ssl_.py>:137: InsecurePlatformWarning: A true SSLContext object is not available. This prevents urllib3 from configuring SSL appropriately and may cause certain SSL connections to fail. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings InsecurePlatformWarning Using cached https://files.pythonhosted.org/packages/61/20/75ac3d6dca2880c2086c27d984de5d9583de68720f2925ee085aadb286d3/grpcio-1.10.1-cp27-cp27mu-manylinux1_x86_64.whl Collecting hdfs<3.0.0,>=2.1.0 (from apache-beam==2.5.0.dev0) <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/.env/local/lib/python2.7/site-packages/pip/_vendor/urllib3/util/ssl_.py>:137: InsecurePlatformWarning: A true SSLContext object is not available. This prevents urllib3 from configuring SSL appropriately and may cause certain SSL connections to fail. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings InsecurePlatformWarning Requirement already satisfied: httplib2<0.10,>=0.8 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: mock<3.0.0,>=1.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: oauth2client<5,>=2.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: protobuf<4,>=3.5.0.post1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Collecting pytz>=2018.3 (from apache-beam==2.5.0.dev0) <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/.env/local/lib/python2.7/site-packages/pip/_vendor/urllib3/util/ssl_.py>:137: InsecurePlatformWarning: A true SSLContext object is not available. This prevents urllib3 from configuring SSL appropriately and may cause certain SSL connections to fail. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings InsecurePlatformWarning Using cached https://files.pythonhosted.org/packages/dc/83/15f7833b70d3e067ca91467ca245bae0f6fe56ddc7451aa0dc5606b120f2/pytz-2018.4-py2.py3-none-any.whl Requirement already satisfied: pyyaml<4.0.0,>=3.12 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: pyvcf<0.7.0,>=0.6.8 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: six<1.12,>=1.9 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: typing<3.7.0,>=3.6.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: futures<4.0.0,>=3.1.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: google-apitools<=0.5.20,>=0.5.18 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: proto-google-cloud-datastore-v1<=0.90.4,>=0.90.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: googledatastore==7.0.1 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: google-cloud-pubsub==0.26.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: proto-google-cloud-pubsub-v1==0.15.4 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: google-cloud-bigquery==0.25.0 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Collecting nose>=1.3.7 (from apache-beam==2.5.0.dev0) <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/.env/local/lib/python2.7/site-packages/pip/_vendor/urllib3/util/ssl_.py>:137: InsecurePlatformWarning: A true SSLContext object is not available. This prevents urllib3 from configuring SSL appropriately and may cause certain SSL connections to fail. You can upgrade to a newer version of Python to solve this. For more information, see https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings InsecurePlatformWarning Using cached https://files.pythonhosted.org/packages/99/4f/13fb671119e65c4dce97c60e67d3fd9e6f7f809f2b307e2611f4701205cb/nose-1.3.7-py2-none-any.whl Requirement already satisfied: pyhamcrest<2.0,>=1.9 in /home/jenkins/.local/lib/python2.7/site-packages (from apache-beam==2.5.0.dev0) Requirement already satisfied: enum34>=1.0.4 in /home/jenkins/.local/lib/python2.7/site-packages (from grpcio<2,>=1.8->apache-beam==2.5.0.dev0) Requirement already satisfied: requests>=2.7.0 in /home/jenkins/.local/lib/python2.7/site-packages (from hdfs<3.0.0,>=2.1.0->apache-beam==2.5.0.dev0) Requirement already satisfied: docopt in /usr/local/lib/python2.7/dist-packages (from hdfs<3.0.0,>=2.1.0->apache-beam==2.5.0.dev0) Requirement already satisfied: funcsigs>=1; python_version < "3.3" in /home/jenkins/.local/lib/python2.7/site-packages (from 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google-gax<0.16dev,>=0.15.7->gapic-google-cloud-pubsub-v1<0.16dev,>=0.15.0->google-cloud-pubsub==0.26.0->apache-beam==2.5.0.dev0) Installing collected packages: grpcio, hdfs, pytz, nose, apache-beam Found existing installation: grpcio 1.3.5 Not uninstalling grpcio at /home/jenkins/.local/lib/python2.7/site-packages, outside environment <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/.env> Running setup.py develop for apache-beam Successfully installed apache-beam grpcio-1.10.1 hdfs-2.1.0 nose-1.3.7 pytz-2018.4 [beam_PerformanceTests_Python] $ /bin/bash -xe /tmp/jenkins9164057897115840406.sh + .env/bin/python PerfKitBenchmarker/pkb.py --project=apache-beam-testing --dpb_log_level=INFO --maven_binary=/home/jenkins/tools/maven/latest/bin/mvn --bigquery_table=beam_performance.pkb_results --temp_dir=<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/> --official=true --beam_sdk=python --benchmarks=beam_integration_benchmark --beam_it_args=--project=apache-beam-testing,--staging_location=gs://temp-storage-for-end-to-end-tests/staging-it,--temp_location=gs://temp-storage-for-end-to-end-tests/temp-it,--output=gs://temp-storage-for-end-to-end-tests/py-it-cloud/output 2018-04-12 18:06:54,548 745b6f90 MainThread INFO Verbose logging to: <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/runs/745b6f90/pkb.log> 2018-04-12 18:06:54,548 745b6f90 MainThread INFO PerfKitBenchmarker version: v1.12.0-486-gaf1f6c2 2018-04-12 18:06:54,548 745b6f90 MainThread INFO Flag values: --beam_sdk=python --temp_dir=<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/> --beam_it_args=--project=apache-beam-testing,--staging_location=gs://temp-storage-for-end-to-end-tests/staging-it,--temp_location=gs://temp-storage-for-end-to-end-tests/temp-it,--output=gs://temp-storage-for-end-to-end-tests/py-it-cloud/output --maven_binary=/home/jenkins/tools/maven/latest/bin/mvn --project=apache-beam-testing --bigquery_table=beam_performance.pkb_results --official --dpb_log_level=INFO --benchmarks=beam_integration_benchmark 2018-04-12 18:06:54,871 745b6f90 MainThread WARNING The key "flags" was not in the default config, but was in user overrides. This may indicate a typo. 2018-04-12 18:06:54,871 745b6f90 MainThread INFO Initializing the edw service decoder 2018-04-12 18:06:55,016 745b6f90 MainThread beam_integration_benchmark(1/1) INFO Provisioning resources for benchmark beam_integration_benchmark 2018-04-12 18:06:55,020 745b6f90 MainThread beam_integration_benchmark(1/1) INFO Preparing benchmark beam_integration_benchmark 2018-04-12 18:06:55,020 745b6f90 MainThread beam_integration_benchmark(1/1) INFO Running: git clone https://github.com/apache/beam.git 2018-04-12 18:07:02,375 745b6f90 MainThread beam_integration_benchmark(1/1) INFO Running: /home/jenkins/tools/maven/latest/bin/mvn clean install -DskipTests -Dcheckstyle.skip=true -Pdataflow-runner 2018-04-12 18:14:50,113 745b6f90 MainThread beam_integration_benchmark(1/1) INFO Running benchmark beam_integration_benchmark 2018-04-12 18:14:50,127 745b6f90 MainThread beam_integration_benchmark(1/1) INFO Running: python setup.py nosetests --tests=apache_beam.examples.wordcount_it_test --attr=IT --test-pipeline-options="--project=apache-beam-testing" "--staging_location=gs://temp-storage-for-end-to-end-tests/staging-it" "--temp_location=gs://temp-storage-for-end-to-end-tests/temp-it" "--output=gs://temp-storage-for-end-to-end-tests/py-it-cloud/output" --runner=TestDataflowRunner --sdk_location=<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/runs/745b6f90/beam/sdks/python/target/apache-beam-2.5.0.dev0.tar.gz> 2018-04-12 18:14:50,696 745b6f90 MainThread beam_integration_benchmark(1/1) INFO Ran: {python setup.py nosetests --tests=apache_beam.examples.wordcount_it_test --attr=IT --test-pipeline-options="--project=apache-beam-testing" "--staging_location=gs://temp-storage-for-end-to-end-tests/staging-it" "--temp_location=gs://temp-storage-for-end-to-end-tests/temp-it" "--output=gs://temp-storage-for-end-to-end-tests/py-it-cloud/output" --runner=TestDataflowRunner --sdk_location=<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/runs/745b6f90/beam/sdks/python/target/apache-beam-2.5.0.dev0.tar.gz}> ReturnCode:1 STDOUT: STDERR: /usr/local/lib/python2.7/dist-packages/setuptools/dist.py:397: UserWarning: Normalizing '2.5.0.dev' to '2.5.0.dev0' normalized_version, usage: setup.py [global_opts] cmd1 [cmd1_opts] [cmd2 [cmd2_opts] ...] or: setup.py --help [cmd1 cmd2 ...] or: setup.py --help-commands or: setup.py cmd --help error: invalid command 'nosetests' 2018-04-12 18:14:50,697 745b6f90 MainThread beam_integration_benchmark(1/1) ERROR Error during benchmark beam_integration_benchmark Traceback (most recent call last): File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py",> line 623, in RunBenchmark DoRunPhase(spec, collector, detailed_timer) File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py",> line 526, in DoRunPhase samples = spec.BenchmarkRun(spec) File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/linux_benchmarks/beam_integration_benchmark.py",> line 159, in Run job_type=job_type) File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/providers/gcp/gcp_dpb_dataflow.py",> line 90, in SubmitJob assert retcode == 0, "Integration Test Failed." AssertionError: Integration Test Failed. 2018-04-12 18:14:50,698 745b6f90 MainThread beam_integration_benchmark(1/1) INFO Cleaning up benchmark beam_integration_benchmark 2018-04-12 18:14:50,699 745b6f90 MainThread beam_integration_benchmark(1/1) ERROR Exception running benchmark Traceback (most recent call last): File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py",> line 757, in RunBenchmarkTask RunBenchmark(spec, collector) File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py",> line 623, in RunBenchmark DoRunPhase(spec, collector, detailed_timer) File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/pkb.py",> line 526, in DoRunPhase samples = spec.BenchmarkRun(spec) File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/linux_benchmarks/beam_integration_benchmark.py",> line 159, in Run job_type=job_type) File "<https://builds.apache.org/job/beam_PerformanceTests_Python/ws/PerfKitBenchmarker/perfkitbenchmarker/providers/gcp/gcp_dpb_dataflow.py",> line 90, in SubmitJob assert retcode == 0, "Integration Test Failed." AssertionError: Integration Test Failed. 2018-04-12 18:14:50,700 745b6f90 MainThread beam_integration_benchmark(1/1) ERROR Benchmark 1/1 beam_integration_benchmark (UID: beam_integration_benchmark0) failed. Execution will continue. 2018-04-12 18:14:50,753 745b6f90 MainThread INFO Benchmark run statuses: --------------------------------------------------------------------------------- Name UID Status Failed Substatus --------------------------------------------------------------------------------- beam_integration_benchmark beam_integration_benchmark0 FAILED --------------------------------------------------------------------------------- Success rate: 0.00% (0/1) 2018-04-12 18:14:50,754 745b6f90 MainThread INFO Complete logs can be found at: <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/runs/745b6f90/pkb.log> 2018-04-12 18:14:50,754 745b6f90 MainThread INFO Completion statuses can be found at: <https://builds.apache.org/job/beam_PerformanceTests_Python/ws/runs/745b6f90/completion_statuses.json> Build step 'Execute shell' marked build as failure Not sending mail to unregistered user aljoscha.kret...@gmail.com Not sending mail to unregistered user sweg...@google.com Not 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