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https://issues.apache.org/jira/browse/CASSANDRA-8719?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=14314498#comment-14314498
]
Randy Fradin commented on CASSANDRA-8719:
-----------------------------------------
>From cassandra-cli on a fresh 1-node cluster running 2.1.0 with
>offheap_objects and hsha enabled:
{quote}
create keyspace ks1 with placement_strategy =
'org.apache.cassandra.locator.SimpleStrategy' and strategy_options =
{replication_factor:1};
use ks1;
create column family cf1
with comparator = 'AsciiType'
and key_validation_class = 'AsciiType'
and default_validation_class = 'AsciiType'
and column_type = 'Standard'
and gc_grace = 864000
and read_repair_chance = 1.0
and compaction_strategy =
'org.apache.cassandra.db.compaction.LeveledCompactionStrategy'
and compaction_strategy_options = {sstable_size_in_mb:160}
and compression_options = {sstable_compression:SnappyCompressor,
chunk_length_kb:64};
set cf1['111']['1'] = 123;
set cf1['111']['2'] = 456;
set cf1['222']['1'] = 321;
set cf1['222']['2'] = 654;
{quote}
At this point I run nodetool flush. Then back in cassandra-cli:
{quote}
set cf1['333']['1'] = 789;
set cf1['333']['2'] = abc;
set cf1['444']['1'] = 987;
set cf1['444']['2'] = cba;
{quote}
Then nodetool flush again.
Here are the files in the ks1/cf1-63901340b13f11e48e36730c68dbc38c directory:
ks1-cf1-ka-1-CompressionInfo.db
ks1-cf1-ka-1-Data.db
ks1-cf1-ka-1-Digest.sha1
ks1-cf1-ka-1-Filter.db
ks1-cf1-ka-1-Index.db
ks1-cf1-ka-1-Statistics.db
ks1-cf1-ka-1-Summary.db
ks1-cf1-ka-1-TOC.txt
ks1-cf1-ka-2-CompressionInfo.db
ks1-cf1-ka-2-Data.db
ks1-cf1-ka-2-Digest.sha1
ks1-cf1-ka-2-Filter.db
ks1-cf1-ka-2-Index.db
ks1-cf1-ka-2-Statistics.db
ks1-cf1-ka-2-Summary.db
ks1-cf1-ka-2-TOC.txt
And I see this in the log from the second flush onward:
{quote}
INFO [RMI TCP Connection(6)-45.10.96.124] 2015-02-10 11:12:37,596
ColumnFamilyStore.java (line 856) Enqueuing flush of cf1: 584 (0%) on-heap, 166
(0%) off-heap
INFO [MemtableFlushWriter:9] 2015-02-10 11:12:37,597 Memtable.java (line 326)
Writing Memtable-cf1@114791717(72 serialized bytes, 4 ops, 0%/0% of on/off-heap
limit)
INFO [MemtableFlushWriter:9] 2015-02-10 11:12:37,600 Memtable.java (line 360)
Completed flushing
/tmp/cassandra/data/ks1/cf1-63901340b13f11e48e36730c68dbc38c/ks1-cf1-ka-2-Data.db
(67 bytes) for commitlog position ReplayPosition(segmentId=1423583589486,
position=4428)
INFO [RMI TCP Connection(6)-45.10.96.124] 2015-02-10 11:12:37,603
ColumnFamilyStore.java (line 856) Enqueuing flush of compaction_history: 412
(0%) on-heap, 328 (0%) off-heap
INFO [CompactionExecutor:10] 2015-02-10 11:12:37,605 ColumnFamilyStore.java
(line 856) Enqueuing flush of compactions_in_progress: 356 (0%) on-heap, 175
(0%) off-heap
INFO [MemtableFlushWriter:8] 2015-02-10 11:12:37,605 Memtable.java (line 326)
Writing Memtable-compaction_history@1602711153(253 serialized bytes, 9 ops,
0%/0% of on/off-heap limit)
INFO [MemtableFlushWriter:9] 2015-02-10 11:12:37,606 Memtable.java (line 326)
Writing Memtable-compactions_in_progress@468406472(117 serialized bytes, 7 ops,
0%/0% of on/off-heap limit)
INFO [MemtableFlushWriter:9] 2015-02-10 11:12:37,609 Memtable.java (line 360)
Completed flushing
/tmp/cassandra/data/system/compactions_in_progress-55080ab05d9c388690a4acb25fe1f77b/system-compactions_in_progress-ka-1-Data.db
(145 bytes) for commitlog position ReplayPosition(segmentId=1423583589486,
position=4685)
INFO [MemtableFlushWriter:8] 2015-02-10 11:12:37,611 Memtable.java (line 360)
Completed flushing
/tmp/cassandra/data/system/compaction_history-b4dbb7b4dc493fb5b3bfce6e434832ca/system-compaction_history-ka-2-Data.db
(239 bytes) for commitlog position ReplayPosition(segmentId=1423583589486,
position=4428)
INFO [CompactionExecutor:10] 2015-02-10 11:12:37,612 CompactionTask.java (line
138) Compacting
[SSTableReader(path='/tmp/cassandra/data/ks1/cf1-63901340b13f11e48e36730c68dbc38c/ks1-cf1-ka-1-Data.db'),
SSTableReader(path='/tmp/cassandra/data/ks1/cf1-63901340b13f11e48e36730c68dbc38c/ks1-cf1-ka-2-Data.db')]
INFO [CompactionExecutor:10] 2015-02-10 11:12:37,647 ColumnFamilyStore.java
(line 856) Enqueuing flush of compactions_in_progress: 212 (0%) on-heap, 20
(0%) off-heap
INFO [MemtableFlushWriter:9] 2015-02-10 11:12:37,648 Memtable.java (line 326)
Writing Memtable-compactions_in_progress@359614352(0 serialized bytes, 1 ops,
0%/0% of on/off-heap limit)
INFO [MemtableFlushWriter:9] 2015-02-10 11:12:37,650 Memtable.java (line 360)
Completed flushing
/tmp/cassandra/data/system/compactions_in_progress-55080ab05d9c388690a4acb25fe1f77b/system-compactions_in_progress-ka-2-Data.db
(42 bytes) for commitlog position ReplayPosition(segmentId=1423583589486,
position=4756)
ERROR [CompactionExecutor:10] 2015-02-10 11:12:37,655 CassandraDaemon.java
(line 166) Exception in thread Thread[CompactionExecutor:10,1,RMI Runtime]
java.lang.RuntimeException: Last written key
DecoratedKey(135414706852123109601202796181083437879, 800100) >= current key
DecoratedKey(135414706852123109601202796181083437879, 800100) writing into
/tmp/cassandra/data/ks1/cf1-63901340b13f11e48e36730c68dbc38c/ks1-cf1-tmp-ka-3-Data.db
at
org.apache.cassandra.io.sstable.SSTableWriter.beforeAppend(SSTableWriter.java:172)
~[apache-cassandra-2.1.0.jar:2.1.0]
at
org.apache.cassandra.io.sstable.SSTableWriter.append(SSTableWriter.java:196)
~[apache-cassandra-2.1.0.jar:2.1.0]
at
org.apache.cassandra.io.sstable.SSTableRewriter.append(SSTableRewriter.java:110)
~[apache-cassandra-2.1.0.jar:2.1.0]
at
org.apache.cassandra.db.compaction.CompactionTask.runWith(CompactionTask.java:177)
~[apache-cassandra-2.1.0.jar:2.1.0]
at
org.apache.cassandra.io.util.DiskAwareRunnable.runMayThrow(DiskAwareRunnable.java:48)
~[apache-cassandra-2.1.0.jar:2.1.0]
at
org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28)
~[apache-cassandra-2.1.0.jar:2.1.0]
at
org.apache.cassandra.db.compaction.CompactionTask.executeInternal(CompactionTask.java:74)
~[apache-cassandra-2.1.0.jar:2.1.0]
at
org.apache.cassandra.db.compaction.AbstractCompactionTask.execute(AbstractCompactionTask.java:59)
~[apache-cassandra-2.1.0.jar:2.1.0]
at
org.apache.cassandra.db.compaction.CompactionManager$BackgroundCompactionTask.run(CompactionManager.java:235)
~[apache-cassandra-2.1.0.jar:2.1.0]
at
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
~[na:1.7.0_40]
at java.util.concurrent.FutureTask.run(FutureTask.java:262)
~[na:1.7.0_40]
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
~[na:1.7.0_40]
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
[na:1.7.0_40]
at java.lang.Thread.run(Thread.java:724) [na:1.7.0_40]
INFO [ScheduledTasks:1] 2015-02-10 12:12:16,529 ColumnFamilyStore.java (line
856) Enqueuing flush of sstable_activity: 900 (0%) on-heap, 4183 (0%) off-heap
INFO [MemtableFlushWriter:10] 2015-02-10 12:12:16,530 Memtable.java (line 326)
Writing Memtable-sstable_activity@2019899836(270 serialized bytes, 108 ops,
0%/0% of on/off-heap limit)
INFO [MemtableFlushWriter:10] 2015-02-10 12:12:16,534 Memtable.java (line 360)
Completed flushing
/tmp/cassandra/data/system/sstable_activity-5a1ff267ace03f128563cfae6103c65e/system-sstable_activity-ka-2-Data.db
(194 bytes) for commitlog position ReplayPosition(segmentId=1423583589486,
position=11832)
{quote}
If I do a list back in cassandra-cli:
list cf1;
Using default limit of 100
Using default cell limit of 100
Invalid byte for ascii: -128
> Using thrift HSHA with offheap_objects appears to corrupt data
> --------------------------------------------------------------
>
> Key: CASSANDRA-8719
> URL: https://issues.apache.org/jira/browse/CASSANDRA-8719
> Project: Cassandra
> Issue Type: Bug
> Components: Core
> Reporter: Randy Fradin
> Assignee: Marcus Eriksson
> Fix For: 2.1.3
>
>
> Copying my comment from CASSANDRA-6285 to a new issue since that issue is
> long closed and I'm not sure if they are related...
> I am getting this exception using Thrift HSHA in 2.1.0:
> {quote}
> INFO [CompactionExecutor:8] 2015-01-26 13:32:51,818 CompactionTask.java
> (line 138) Compacting
> [SSTableReader(path='/tmp/cass_test/cassandra/TestCassandra/data/test_ks/test_cf-1c45da40a58911e4826751fbbc77b187/test_ks-test_cf-ka-2-Data.db'),
>
> SSTableReader(path='/tmp/cass_test/cassandra/TestCassandra/data/test_ks/test_cf-1c45da40a58911e4826751fbbc77b187/test_ks-test_cf-ka-1-Data.db')]
> INFO [CompactionExecutor:8] 2015-01-26 13:32:51,890 ColumnFamilyStore.java
> (line 856) Enqueuing flush of compactions_in_progress: 212 (0%) on-heap, 20
> (0%) off-heap
> INFO [MemtableFlushWriter:8] 2015-01-26 13:32:51,892 Memtable.java (line
> 326) Writing Memtable-compactions_in_progress@1155018639(0 serialized bytes,
> 1 ops, 0%/0% of on/off-heap limit)
> INFO [MemtableFlushWriter:8] 2015-01-26 13:32:51,896 Memtable.java (line
> 360) Completed flushing
> /tmp/cass_test/cassandra/TestCassandra/data/system/compactions_in_progress-55080ab05d9c388690a4acb25fe1f77b/system-compactions_in_progress-ka-2-Data.db
> (42 bytes) for commitlog position ReplayPosition(segmentId=1422296630707,
> position=430226)
> ERROR [CompactionExecutor:8] 2015-01-26 13:32:51,906 CassandraDaemon.java
> (line 166) Exception in thread Thread[CompactionExecutor:8,1,RMI Runtime]
> java.lang.RuntimeException: Last written key
> DecoratedKey(131206587314004820534098544948237170809,
> 800100010000000c62617463685f6d7574617465000000) >= current key
> DecoratedKey(14775611966645399672119169777260659240,
> 726f776b65793030385f31343232323937313537353835) writing into
> /tmp/cass_test/cassandra/TestCassandra/data/test_ks/test_cf-1c45da40a58911e4826751fbbc77b187/test_ks-test_cf-tmp-ka-3-Data.db
> at
> org.apache.cassandra.io.sstable.SSTableWriter.beforeAppend(SSTableWriter.java:172)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.io.sstable.SSTableWriter.append(SSTableWriter.java:196)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.io.sstable.SSTableRewriter.append(SSTableRewriter.java:110)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.db.compaction.CompactionTask.runWith(CompactionTask.java:177)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.io.util.DiskAwareRunnable.runMayThrow(DiskAwareRunnable.java:48)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.utils.WrappedRunnable.run(WrappedRunnable.java:28)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.db.compaction.CompactionTask.executeInternal(CompactionTask.java:74)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.db.compaction.AbstractCompactionTask.execute(AbstractCompactionTask.java:59)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.db.compaction.CompactionManager$BackgroundCompactionTask.run(CompactionManager.java:235)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
> ~[na:1.7.0_40]
> at java.util.concurrent.FutureTask.run(FutureTask.java:262)
> ~[na:1.7.0_40]
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
> ~[na:1.7.0_40]
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> [na:1.7.0_40]
> at java.lang.Thread.run(Thread.java:724) [na:1.7.0_40]
> {quote}
> I don't think it's caused by CASSANDRA-8211, because it happens during the
> first compaction that takes place between the first 2 SSTables to get flushed
> from an initially empty column family.
> Also, I've only been able to reproduce it when using both *hsha* for the rpc
> server and *offheap_objects* for memtable allocation. If I switch either to
> sync or to offheap_buffers or heap_buffers then I cannot reproduce the
> problem. Also under the same circumstances I'm pretty sure I've seen
> incorrect data being returned to a client multiget_slice request before any
> SSTables had been flushed yet, so I presume this is corruption that happens
> before any flush/compaction takes place.
> nodetool scrub yielded these errors:
> {quote}
> INFO [CompactionExecutor:9] 2015-01-26 13:48:01,512 OutputHandler.java (line
> 42) Scrubbing
> SSTableReader(path='/tmp/cass_test/cassandra/TestCassandra/data/test_ks/test_cf-1c45da40a58911e4826751fbbc77b187/test_ks-test_cf-ka-2-Data.db')
> (168780 bytes)
> INFO [CompactionExecutor:10] 2015-01-26 13:48:01,512 OutputHandler.java
> (line 42) Scrubbing
> SSTableReader(path='/tmp/cass_test/cassandra/TestCassandra/data/test_ks/test_cf-1c45da40a58911e4826751fbbc77b187/test_ks-test_cf-ka-1-Data.db')
> (135024 bytes)
> WARN [CompactionExecutor:9] 2015-01-26 13:48:01,531 OutputHandler.java (line
> 52) Out of order row detected
> (DecoratedKey(14775611966645399672119169777260659240,
> 726f776b65793030385f31343232323937313537353835) found after
> DecoratedKey(131206587314004820534098544948237170809,
> 800100010000000c62617463685f6d7574617465000000))
> WARN [CompactionExecutor:9] 2015-01-26 13:48:01,534 OutputHandler.java (line
> 57) Error reading row (stacktrace follows):
> java.lang.RuntimeException: Last written key
> DecoratedKey(131206587314004820534098544948237170809,
> 800100010000000c62617463685f6d7574617465000000) >= current key
> DecoratedKey(131206587314004820534098544948237170809,
> 800100010000000c62617463685f6d7574617465000000) writing into
> /tmp/cass_test/cassandra/TestCassandra/data/test_ks/test_cf-1c45da40a58911e4826751fbbc77b187/test_ks-test_cf-tmp-ka-4-Data.db
> at
> org.apache.cassandra.io.sstable.SSTableWriter.beforeAppend(SSTableWriter.java:172)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.io.sstable.SSTableWriter.append(SSTableWriter.java:196)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.io.sstable.SSTableRewriter.append(SSTableRewriter.java:110)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.io.sstable.SSTableRewriter.tryAppend(SSTableRewriter.java:141)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.db.compaction.Scrubber.scrub(Scrubber.java:186)
> ~[apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.db.compaction.CompactionManager.scrubOne(CompactionManager.java:592)
> [apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.db.compaction.CompactionManager.access$300(CompactionManager.java:100)
> [apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.db.compaction.CompactionManager$3.execute(CompactionManager.java:315)
> [apache-cassandra-2.1.0.jar:2.1.0]
> at
> org.apache.cassandra.db.compaction.CompactionManager$2.call(CompactionManager.java:270)
> [apache-cassandra-2.1.0.jar:2.1.0]
> at java.util.concurrent.FutureTask.run(FutureTask.java:262)
> [na:1.7.0_40]
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
> [na:1.7.0_40]
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> [na:1.7.0_40]
> at java.lang.Thread.run(Thread.java:724) [na:1.7.0_40]
> WARN [CompactionExecutor:9] 2015-01-26 13:48:01,534 OutputHandler.java (line
> 52) Row starting at position 25342 is unreadable; skipping to next
> WARN [CompactionExecutor:10] 2015-01-26 13:48:01,534 OutputHandler.java
> (line 52) Out of order row detected
> (DecoratedKey(29459452031265566667651334397450214244,
> 726f776b65793030355f31343232323936393033323837) found after
> DecoratedKey(131206587314004820534098544948237170809,
> 800100010000000c62617463685f6d7574617465000000))
> etc...
> {quote}
> I've able to reliably reproduce by creating a new empty table, writing a few
> partitions containing a few rows each, forcing a flush using nodetool,
> writing some more, and flushing again, and letting the first compaction
> happen (using LCS). If I read before flushing, sometimes I will get zero rows
> back (with quorum between writes and reads), or corrupt bytes, though
> sometimes reading would yield the correct results. I haven't been able to
> narrow down yet the cases when the data comes back corrupt vs not, though in
> the same test case (one set of of writes) the results of a read appear to be
> consistent (successive reads are either all correct or all incorrect).
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