[
https://issues.apache.org/jira/browse/CASSANDRA-8798?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
]
mck updated CASSANDRA-8798:
---------------------------
Description:
During bootstrap honouring tombstone_failure_threshold seems counter-productive
as the node is not serving requests so not protecting anything.
Instead what happens is bootstrap fails, and a cluster that obviously needs an
extra node isn't getting it...
**History**
When adding a new node bootstrap process looks complete in that streaming is
finished, compactions finished, and all disk and cpu activity is calm.
But the node is still stuck in "joining" status.
The last stage in the bootstrapping process is the rebuilding of secondary
indexes. grepping the logs confirmed it failed during this stage.
{code}grep SecondaryIndexManager cassandra/logs/*{code}
To see what secondary index rebuilding was initiated
{code}
grep "index build of " cassandra/logs/* | awk -F" for data in " '{print $1}'
INFO 13:18:11,252 Submitting index build of addresses.unobfuscatedIndex
INFO 13:18:11,352 Submitting index build of Inbox.FINNBOXID_INDEX
INFO 23:03:54,758 Submitting index build of [events.collected_tbIndex,
events.real_tbIndex]
{code}
To get an idea of successful secondary index rebuilding
{code}grep "Index build of "cassandra/logs/*
INFO 13:18:11,263 Index build of addresses.unobfuscatedIndex complete
INFO 13:18:11,355 Index build of Inbox.FINNBOXID_INDEX complete
{code}
Looking closer at {{[events.collected_tbIndex, events.real_tbIndex]}} showed
the following stacktrace
{code}
ERROR [StreamReceiveTask:121] 2015-02-12 05:54:47,768 CassandraDaemon.java
(line 199) Exception in thread Thread[StreamReceiveTask:121,5,main]
java.lang.RuntimeException: java.util.concurrent.ExecutionException:
java.lang.RuntimeException:
org.apache.cassandra.db.filter.TombstoneOverwhelmingException
at
org.apache.cassandra.utils.FBUtilities.waitOnFuture(FBUtilities.java:413)
at
org.apache.cassandra.db.index.SecondaryIndexManager.maybeBuildSecondaryIndexes(SecondaryIndexManager.java:142)
at
org.apache.cassandra.streaming.StreamReceiveTask$OnCompletionRunnable.run(StreamReceiveTask.java:130)
at
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
at java.util.concurrent.FutureTask.run(FutureTask.java:262)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.util.concurrent.ExecutionException: java.lang.RuntimeException:
org.apache.cassandra.db.filter.TombstoneOverwhelmingException
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:188)
at
org.apache.cassandra.utils.FBUtilities.waitOnFuture(FBUtilities.java:409)
... 7 more
Caused by: java.lang.RuntimeException:
org.apache.cassandra.db.filter.TombstoneOverwhelmingException
at
org.apache.cassandra.service.pager.QueryPagers$1.next(QueryPagers.java:160)
at
org.apache.cassandra.service.pager.QueryPagers$1.next(QueryPagers.java:143)
at org.apache.cassandra.db.Keyspace.indexRow(Keyspace.java:406)
at
org.apache.cassandra.db.index.SecondaryIndexBuilder.build(SecondaryIndexBuilder.java:62)
at
org.apache.cassandra.db.compaction.CompactionManager$9.run(CompactionManager.java:834)
... 5 more
Caused by: org.apache.cassandra.db.filter.TombstoneOverwhelmingException
at
org.apache.cassandra.db.filter.SliceQueryFilter.collectReducedColumns(SliceQueryFilter.java:202)
at
org.apache.cassandra.db.filter.QueryFilter.collateColumns(QueryFilter.java:122)
at
org.apache.cassandra.db.filter.QueryFilter.collateOnDiskAtom(QueryFilter.java:80)
at
org.apache.cassandra.db.filter.QueryFilter.collateOnDiskAtom(QueryFilter.java:72)
at
org.apache.cassandra.db.CollationController.collectAllData(CollationController.java:297)
at
org.apache.cassandra.db.CollationController.getTopLevelColumns(CollationController.java:53)
at
org.apache.cassandra.db.ColumnFamilyStore.getTopLevelColumns(ColumnFamilyStore.java:1547)
at
org.apache.cassandra.db.ColumnFamilyStore.getColumnFamily(ColumnFamilyStore.java:1376)
at org.apache.cassandra.db.Keyspace.getRow(Keyspace.java:333)
at
org.apache.cassandra.db.SliceFromReadCommand.getRow(SliceFromReadCommand.java:65)
at
org.apache.cassandra.service.pager.SliceQueryPager.queryNextPage(SliceQueryPager.java:85)
at
org.apache.cassandra.service.pager.AbstractQueryPager.fetchPage(AbstractQueryPager.java:88)
at
org.apache.cassandra.service.pager.SliceQueryPager.fetchPage(SliceQueryPager.java:35)
at
org.apache.cassandra.service.pager.QueryPagers$1.next(QueryPagers.java:154)
... 9 more
{code}
To get past this i had to raise
org.apache.cassandra.db:type=StorageService.TombstoneFailureThreshold and
manually rebuild the index. Then restart the node with auto_bootstrap=false
was:
During bootstrap honouring tombstone_failure_threshold seems counter-productive
as the node is not serving requests so not protecting anything.
Instead what happens is bootstrap fails, and a cluster that obviously needs an
extra node isn't getting it...
**History**
When adding a new node bootstrap process looks complete in that streaming is
finished, compactions finished, and all disk and cpu activity is calm.
But the node is still stuck in "joining" status.
The last stage in the bootstrapping process is the rebuilding of secondary
indexes. grepping the logs confirmed it failed during this stage.
{code}grep SecondaryIndexManager cassandra/logs/*{code}
To see what secondary index rebuilding was initiated
{code}
grep "index build of " cassandra/logs/* | awk -F" for data in " '{print $1}'
INFO 13:18:11,252 Submitting index build of addresses.unobfuscatedIndex
INFO 13:18:11,352 Submitting index build of Inbox.FINNBOXID_INDEX
INFO 23:03:54,758 Submitting index build of [events.collected_tbIndex,
events.real_tbIndex]
{code}
To get an idea of successful secondary index rebuilding
{code}grep "Index build of "cassandra/logs/*
INFO 13:18:11,263 Index build of addresses.unobfuscatedIndex complete
INFO 13:18:11,355 Index build of Inbox.FINNBOXID_INDEX complete
{code}
Looking closer at {{[events.collected_tbIndex, events.real_tbIndex]}} showed
the following stacktrace
{code}
ERROR [StreamReceiveTask:121] 2015-02-12 05:54:47,768 CassandraDaemon.java
(line 199) Exception in thread Thread[StreamReceiveTask:121,5,main]
java.lang.RuntimeException: java.util.concurrent.ExecutionException:
java.lang.RuntimeException:
org.apache.cassandra.db.filter.TombstoneOverwhelmingException
at
org.apache.cassandra.utils.FBUtilities.waitOnFuture(FBUtilities.java:413)
at
org.apache.cassandra.db.index.SecondaryIndexManager.maybeBuildSecondaryIndexes(SecondaryIndexManager.java:142)
at
org.apache.cassandra.streaming.StreamReceiveTask$OnCompletionRunnable.run(StreamReceiveTask.java:130)
at
java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
at java.util.concurrent.FutureTask.run(FutureTask.java:262)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.util.concurrent.ExecutionException: java.lang.RuntimeException:
org.apache.cassandra.db.filter.TombstoneOverwhelmingException
at java.util.concurrent.FutureTask.report(FutureTask.java:122)
at java.util.concurrent.FutureTask.get(FutureTask.java:188)
at
org.apache.cassandra.utils.FBUtilities.waitOnFuture(FBUtilities.java:409)
... 7 more
Caused by: java.lang.RuntimeException:
org.apache.cassandra.db.filter.TombstoneOverwhelmingException
at
org.apache.cassandra.service.pager.QueryPagers$1.next(QueryPagers.java:160)
at
org.apache.cassandra.service.pager.QueryPagers$1.next(QueryPagers.java:143)
at org.apache.cassandra.db.Keyspace.indexRow(Keyspace.java:406)
at
org.apache.cassandra.db.index.SecondaryIndexBuilder.build(SecondaryIndexBuilder.java:62)
at
org.apache.cassandra.db.compaction.CompactionManager$9.run(CompactionManager.java:834)
... 5 more
Caused by: org.apache.cassandra.db.filter.TombstoneOverwhelmingException
at
org.apache.cassandra.db.filter.SliceQueryFilter.collectReducedColumns(SliceQueryFilter.java:202)
at
org.apache.cassandra.db.filter.QueryFilter.collateColumns(QueryFilter.java:122)
at
org.apache.cassandra.db.filter.QueryFilter.collateOnDiskAtom(QueryFilter.java:80)
at
org.apache.cassandra.db.filter.QueryFilter.collateOnDiskAtom(QueryFilter.java:72)
at
org.apache.cassandra.db.CollationController.collectAllData(CollationController.java:297)
at
org.apache.cassandra.db.CollationController.getTopLevelColumns(CollationController.java:53)
at
org.apache.cassandra.db.ColumnFamilyStore.getTopLevelColumns(ColumnFamilyStore.java:1547)
at
org.apache.cassandra.db.ColumnFamilyStore.getColumnFamily(ColumnFamilyStore.java:1376)
at org.apache.cassandra.db.Keyspace.getRow(Keyspace.java:333)
at
org.apache.cassandra.db.SliceFromReadCommand.getRow(SliceFromReadCommand.java:65)
at
org.apache.cassandra.service.pager.SliceQueryPager.queryNextPage(SliceQueryPager.java:85)
at
org.apache.cassandra.service.pager.AbstractQueryPager.fetchPage(AbstractQueryPager.java:88)
at
org.apache.cassandra.service.pager.SliceQueryPager.fetchPage(SliceQueryPager.java:35)
at
org.apache.cassandra.service.pager.QueryPagers$1.next(QueryPagers.java:154)
... 9 more
{code}
To get past this i had to raise
org.apache.cassandra.db:type=StorageService.TombstoneFailureThreshold and
manually rebuild the index.
> don't throw TombstoneOverwhelmingException during bootstrap
> -----------------------------------------------------------
>
> Key: CASSANDRA-8798
> URL: https://issues.apache.org/jira/browse/CASSANDRA-8798
> Project: Cassandra
> Issue Type: Bug
> Components: Core
> Reporter: mck
> Fix For: 2.0.13
>
>
> During bootstrap honouring tombstone_failure_threshold seems
> counter-productive as the node is not serving requests so not protecting
> anything.
> Instead what happens is bootstrap fails, and a cluster that obviously needs
> an extra node isn't getting it...
> **History**
> When adding a new node bootstrap process looks complete in that streaming is
> finished, compactions finished, and all disk and cpu activity is calm.
> But the node is still stuck in "joining" status.
> The last stage in the bootstrapping process is the rebuilding of secondary
> indexes. grepping the logs confirmed it failed during this stage.
> {code}grep SecondaryIndexManager cassandra/logs/*{code}
> To see what secondary index rebuilding was initiated
> {code}
> grep "index build of " cassandra/logs/* | awk -F" for data in " '{print $1}'
> INFO 13:18:11,252 Submitting index build of addresses.unobfuscatedIndex
> INFO 13:18:11,352 Submitting index build of Inbox.FINNBOXID_INDEX
> INFO 23:03:54,758 Submitting index build of [events.collected_tbIndex,
> events.real_tbIndex]
> {code}
> To get an idea of successful secondary index rebuilding
> {code}grep "Index build of "cassandra/logs/*
> INFO 13:18:11,263 Index build of addresses.unobfuscatedIndex complete
> INFO 13:18:11,355 Index build of Inbox.FINNBOXID_INDEX complete
> {code}
> Looking closer at {{[events.collected_tbIndex, events.real_tbIndex]}} showed
> the following stacktrace
> {code}
> ERROR [StreamReceiveTask:121] 2015-02-12 05:54:47,768 CassandraDaemon.java
> (line 199) Exception in thread Thread[StreamReceiveTask:121,5,main]
> java.lang.RuntimeException: java.util.concurrent.ExecutionException:
> java.lang.RuntimeException:
> org.apache.cassandra.db.filter.TombstoneOverwhelmingException
> at
> org.apache.cassandra.utils.FBUtilities.waitOnFuture(FBUtilities.java:413)
> at
> org.apache.cassandra.db.index.SecondaryIndexManager.maybeBuildSecondaryIndexes(SecondaryIndexManager.java:142)
> at
> org.apache.cassandra.streaming.StreamReceiveTask$OnCompletionRunnable.run(StreamReceiveTask.java:130)
> at
> java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
> at java.util.concurrent.FutureTask.run(FutureTask.java:262)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> at java.lang.Thread.run(Thread.java:745)
> Caused by: java.util.concurrent.ExecutionException:
> java.lang.RuntimeException:
> org.apache.cassandra.db.filter.TombstoneOverwhelmingException
> at java.util.concurrent.FutureTask.report(FutureTask.java:122)
> at java.util.concurrent.FutureTask.get(FutureTask.java:188)
> at
> org.apache.cassandra.utils.FBUtilities.waitOnFuture(FBUtilities.java:409)
> ... 7 more
> Caused by: java.lang.RuntimeException:
> org.apache.cassandra.db.filter.TombstoneOverwhelmingException
> at
> org.apache.cassandra.service.pager.QueryPagers$1.next(QueryPagers.java:160)
> at
> org.apache.cassandra.service.pager.QueryPagers$1.next(QueryPagers.java:143)
> at org.apache.cassandra.db.Keyspace.indexRow(Keyspace.java:406)
> at
> org.apache.cassandra.db.index.SecondaryIndexBuilder.build(SecondaryIndexBuilder.java:62)
> at
> org.apache.cassandra.db.compaction.CompactionManager$9.run(CompactionManager.java:834)
> ... 5 more
> Caused by: org.apache.cassandra.db.filter.TombstoneOverwhelmingException
> at
> org.apache.cassandra.db.filter.SliceQueryFilter.collectReducedColumns(SliceQueryFilter.java:202)
> at
> org.apache.cassandra.db.filter.QueryFilter.collateColumns(QueryFilter.java:122)
> at
> org.apache.cassandra.db.filter.QueryFilter.collateOnDiskAtom(QueryFilter.java:80)
> at
> org.apache.cassandra.db.filter.QueryFilter.collateOnDiskAtom(QueryFilter.java:72)
> at
> org.apache.cassandra.db.CollationController.collectAllData(CollationController.java:297)
> at
> org.apache.cassandra.db.CollationController.getTopLevelColumns(CollationController.java:53)
> at
> org.apache.cassandra.db.ColumnFamilyStore.getTopLevelColumns(ColumnFamilyStore.java:1547)
> at
> org.apache.cassandra.db.ColumnFamilyStore.getColumnFamily(ColumnFamilyStore.java:1376)
> at org.apache.cassandra.db.Keyspace.getRow(Keyspace.java:333)
> at
> org.apache.cassandra.db.SliceFromReadCommand.getRow(SliceFromReadCommand.java:65)
> at
> org.apache.cassandra.service.pager.SliceQueryPager.queryNextPage(SliceQueryPager.java:85)
> at
> org.apache.cassandra.service.pager.AbstractQueryPager.fetchPage(AbstractQueryPager.java:88)
> at
> org.apache.cassandra.service.pager.SliceQueryPager.fetchPage(SliceQueryPager.java:35)
> at
> org.apache.cassandra.service.pager.QueryPagers$1.next(QueryPagers.java:154)
> ... 9 more
> {code}
> To get past this i had to raise
> org.apache.cassandra.db:type=StorageService.TombstoneFailureThreshold and
> manually rebuild the index. Then restart the node with auto_bootstrap=false
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