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https://issues.apache.org/jira/browse/CASSANDRA-8798?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel
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Jeff Jirsa updated CASSANDRA-8798:
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Attachment: (was: 8798.txt)
> don't throw TombstoneOverwhelmingException during bootstrap
> -----------------------------------------------------------
>
> Key: CASSANDRA-8798
> URL: https://issues.apache.org/jira/browse/CASSANDRA-8798
> Project: Cassandra
> Issue Type: Bug
> Reporter: mck
> Priority: Major
>
> During bootstrap honouring tombstone_failure_threshold seems
> counter-productive as the node is not serving requests so not protecting
> anything.
> Instead what happens is bootstrap fails, and a cluster that obviously needs
> an extra node isn't getting it...
> **History**
> When adding a new node bootstrap process looks complete in that streaming is
> finished, compactions finished, and all disk and cpu activity is calm.
> But the node is still stuck in "joining" status.
> The last stage in the bootstrapping process is the rebuilding of secondary
> indexes. grepping the logs confirmed it failed during this stage.
> {code}grep SecondaryIndexManager cassandra/logs/*{code}
> To see what secondary index rebuilding was initiated
> {code}
> grep "index build of " cassandra/logs/* | awk -F" for data in " '{print $1}'
> INFO 13:18:11,252 Submitting index build of addresses.unobfuscatedIndex
> INFO 13:18:11,352 Submitting index build of Inbox.FINNBOXID_INDEX
> INFO 23:03:54,758 Submitting index build of [events.collected_tbIndex,
> events.real_tbIndex]
> {code}
> To get an idea of successful secondary index rebuilding
> {code}grep "Index build of "cassandra/logs/*
> INFO 13:18:11,263 Index build of addresses.unobfuscatedIndex complete
> INFO 13:18:11,355 Index build of Inbox.FINNBOXID_INDEX complete
> {code}
> Looking closer at {{[events.collected_tbIndex, events.real_tbIndex]}} showed
> the following stacktrace
> {code}
> ERROR [StreamReceiveTask:121] 2015-02-12 05:54:47,768 CassandraDaemon.java
> (line 199) Exception in thread Thread[StreamReceiveTask:121,5,main]
> java.lang.RuntimeException: java.util.concurrent.ExecutionException:
> java.lang.RuntimeException:
> org.apache.cassandra.db.filter.TombstoneOverwhelmingException
> at
> org.apache.cassandra.utils.FBUtilities.waitOnFuture(FBUtilities.java:413)
> at
> org.apache.cassandra.db.index.SecondaryIndexManager.maybeBuildSecondaryIndexes(SecondaryIndexManager.java:142)
> at
> org.apache.cassandra.streaming.StreamReceiveTask$OnCompletionRunnable.run(StreamReceiveTask.java:130)
> at
> java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
> at java.util.concurrent.FutureTask.run(FutureTask.java:262)
> at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
> at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
> at java.lang.Thread.run(Thread.java:745)
> Caused by: java.util.concurrent.ExecutionException:
> java.lang.RuntimeException:
> org.apache.cassandra.db.filter.TombstoneOverwhelmingException
> at java.util.concurrent.FutureTask.report(FutureTask.java:122)
> at java.util.concurrent.FutureTask.get(FutureTask.java:188)
> at
> org.apache.cassandra.utils.FBUtilities.waitOnFuture(FBUtilities.java:409)
> ... 7 more
> Caused by: java.lang.RuntimeException:
> org.apache.cassandra.db.filter.TombstoneOverwhelmingException
> at
> org.apache.cassandra.service.pager.QueryPagers$1.next(QueryPagers.java:160)
> at
> org.apache.cassandra.service.pager.QueryPagers$1.next(QueryPagers.java:143)
> at org.apache.cassandra.db.Keyspace.indexRow(Keyspace.java:406)
> at
> org.apache.cassandra.db.index.SecondaryIndexBuilder.build(SecondaryIndexBuilder.java:62)
> at
> org.apache.cassandra.db.compaction.CompactionManager$9.run(CompactionManager.java:834)
> ... 5 more
> Caused by: org.apache.cassandra.db.filter.TombstoneOverwhelmingException
> at
> org.apache.cassandra.db.filter.SliceQueryFilter.collectReducedColumns(SliceQueryFilter.java:202)
> at
> org.apache.cassandra.db.filter.QueryFilter.collateColumns(QueryFilter.java:122)
> at
> org.apache.cassandra.db.filter.QueryFilter.collateOnDiskAtom(QueryFilter.java:80)
> at
> org.apache.cassandra.db.filter.QueryFilter.collateOnDiskAtom(QueryFilter.java:72)
> at
> org.apache.cassandra.db.CollationController.collectAllData(CollationController.java:297)
> at
> org.apache.cassandra.db.CollationController.getTopLevelColumns(CollationController.java:53)
> at
> org.apache.cassandra.db.ColumnFamilyStore.getTopLevelColumns(ColumnFamilyStore.java:1547)
> at
> org.apache.cassandra.db.ColumnFamilyStore.getColumnFamily(ColumnFamilyStore.java:1376)
> at org.apache.cassandra.db.Keyspace.getRow(Keyspace.java:333)
> at
> org.apache.cassandra.db.SliceFromReadCommand.getRow(SliceFromReadCommand.java:65)
> at
> org.apache.cassandra.service.pager.SliceQueryPager.queryNextPage(SliceQueryPager.java:85)
> at
> org.apache.cassandra.service.pager.AbstractQueryPager.fetchPage(AbstractQueryPager.java:88)
> at
> org.apache.cassandra.service.pager.SliceQueryPager.fetchPage(SliceQueryPager.java:35)
> at
> org.apache.cassandra.service.pager.QueryPagers$1.next(QueryPagers.java:154)
> ... 9 more
> {code}
> To get past this i had to raise
> org.apache.cassandra.db:type=StorageService.TombstoneFailureThreshold and
> manually rebuild the index. Then restart the node with auto_bootstrap=false
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