This is an automated email from the ASF dual-hosted git repository. olehmykolaishyn pushed a commit to branch 2.5.1-tensor-jupyterlab in repository https://gitbox.apache.org/repos/asf/incubator-datalab.git
commit 6c75bb93780c5710bdfada7480c2e63d5e0f812c Author: oleh_mykolaishyn <[email protected]> AuthorDate: Mon Feb 21 11:18:13 2022 +0200 fixed installation with existing AMI --- .../src/general/lib/os/fab.py | 40 +++------------------- 1 file changed, 4 insertions(+), 36 deletions(-) diff --git a/infrastructure-provisioning/src/general/lib/os/fab.py b/infrastructure-provisioning/src/general/lib/os/fab.py index d6370d5..ef85375 100644 --- a/infrastructure-provisioning/src/general/lib/os/fab.py +++ b/infrastructure-provisioning/src/general/lib/os/fab.py @@ -1047,41 +1047,15 @@ def configure_jupyter(os_user, jupyter_conf_file, templates_dir, jupyter_version def configure_jupyterlab(os_user, jupyterlab_conf_file, templates_dir, jupyterlab_version, exploratory_name): if not exists(conn, '/home/' + os_user + '/.ensure_dir/jupyterlab_ensured'): try: - # conn.sudo('pip3 install notebook=={} --no-cache-dir'.format(jupyter_version)) conn.sudo('source /opt/python/python3.7.9/bin/activate') - #conn.sudo('pip3 install jupyterlab --no-cache-dir') # create external var with version conn.sudo('rm -rf {}'.format(jupyterlab_conf_file)) - #elif os.environ['application'] != 'tensor': - # conn.sudo('pip3 install environment_kernels') - #if os.environ['conf_cloud_provider'] == 'aws' and os.environ['application'] == 'deeplearning': #should be checked if for other applications any files have owner root:root in datalab-user homefolder and where it is changed to root:root on deeplearning - # conn.sudo('chown -R {0}:{0} /home/{0}/.local'.format(os_user)) conn.run('jupyter lab --generate-config') - #conn.run('mkdir -p ~/.jupyter/custom/') - #conn.run('echo "#notebook-container { width: auto; }" > ~/.jupyter/custom/custom.css') conn.sudo('echo "c.NotebookApp.ip = \'0.0.0.0\'" >> {}'.format(jupyterlab_conf_file)) conn.sudo('echo "c.NotebookApp.base_url = \'/{0}/\'" >> {1}'.format(exploratory_name, jupyterlab_conf_file)) conn.sudo('echo c.NotebookApp.open_browser = False >> {}'.format(jupyterlab_conf_file)) conn.sudo('echo \'c.NotebookApp.cookie_secret = b"{0}"\' >> {1}'.format(id_generator(), jupyterlab_conf_file)) conn.sudo('''echo "c.NotebookApp.token = u''" >> {}'''.format(jupyterlab_conf_file)) conn.sudo('echo \'c.KernelSpecManager.ensure_native_kernel = False\' >> {}'.format(jupyterlab_conf_file)) - #if os.environ['conf_deeplearning_cloud_ami'] == 'true' and os.environ['application'] == 'deeplearning': - # conn.sudo( - # '''echo "c.NotebookApp.kernel_spec_manager_class = 'environment_kernels.EnvironmentKernelSpecManager'" >> {}'''.format( - # jupyter_conf_file)) - # conn.sudo( - # '''echo "c.EnvironmentKernelSpecManager.conda_env_dirs=['/home/ubuntu/anaconda3/envs']" >> {}'''.format( - # jupyter_conf_file)) - #conn.put(templates_dir + 'jupyter-notebook.service', '/tmp/jupyter-notebook.service') - #conn.sudo("chmod 644 /tmp/jupyter-notebook.service") - #if os.environ['application'] == 'tensor': # ????? - # conn.sudo( - # "sed -i '/ExecStart/s|-c \"|-c \"export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/cudnn/lib64:/usr/local/cuda/lib64; |g' /tmp/jupyter-notebook.service") - #elif os.environ['application'] == 'deeplearning' and os.environ['conf_deeplearning_cloud_ami'] == 'false': - # conn.sudo( - # "sed -i '/ExecStart/s|-c \"|-c \"export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/cudnn/lib64:/usr/local/cuda/lib64:/usr/lib64/openmpi/lib: ; export PYTHONPATH=/home/" + os_user + - # "/caffe/python:/home/" + os_user + "/pytorch/build:$PYTHONPATH ; |g' /tmp/jupyter-notebook.service") - #conn.sudo("sed -i 's|CONF_PATH|{}|' /tmp/jupyter-notebook.service".format(jupyter_conf_file)) - #conn.sudo("sed -i 's|OS_USR|{}|' /tmp/jupyter-notebook.service".format(os_user)) if os.environ['application'] == 'deeplearning' and os.environ['conf_cloud_provider'] == 'azure': java_home = conn.run("update-alternatives --query java | grep -o --color=never \'/.*/java-11.*/bin/java\'").stdout.splitlines()[0] else: @@ -1092,28 +1066,22 @@ def configure_jupyterlab(os_user, jupyterlab_conf_file, templates_dir, jupyterla conn.sudo('chown -R {0}:{0} /home/{0}/.local'.format(os_user)) conn.sudo('mkdir -p /mnt/var') conn.sudo('chown {0}:{0} /mnt/var'.format(os_user)) - if os.environ['application'] == 'jupyter' or os.environ['application'] == 'deeplearning': - try: - conn.sudo('jupyter-kernelspec remove -f python3 || echo "Such kernel doesnt exists"') - conn.sudo('jupyter-kernelspec remove -f python2 || echo "Such kernel doesnt exists"') - except Exception as err: - logging.error('Error:', str(err)) conn.sudo("systemctl daemon-reload") conn.sudo("systemctl enable jupyterlab-notebook") conn.sudo("systemctl start jupyterlab-notebook") - conn.sudo('touch /home/{}/.ensure_dir/jupyter_ensured'.format(os_user)) + conn.sudo('touch /home/{}/.ensure_dir/jupyterlab_ensured'.format(os_user)) except Exception as err: - logging.error('Function configure_jupyter error:', str(err)) + logging.error('Function configure_jupyterlab error:', str(err)) traceback.print_exc() sys.exit(1) else: try: conn.sudo( 'sed -i "s/c.NotebookApp.base_url =.*/c.NotebookApp.base_url = \'\/{0}\/\'/" {1}'.format( - exploratory_name, jupyter_conf_file)) + exploratory_name, jupyterlab_conf_file)) conn.sudo("systemctl restart jupyterlab-notebook") except Exception as err: - logging.error('Function configure_jupyter error:', str(err)) + logging.error('Function configure_jupyterlab error:', str(err)) traceback.print_exc() sys.exit(1) --------------------------------------------------------------------- To unsubscribe, e-mail: [email protected] For additional commands, e-mail: [email protected]
