haojin2 opened a new pull request #14359: Speedup _contrib_index_copy URL: https://github.com/apache/incubator-mxnet/pull/14359 ## Description ## Re-writing the Map kernel of contrib.index_copy to speed up index_copy operator for DGL usage. Plus a small fix to operator registration to fix problem with symbolic API. ## Checklist ## ### Essentials ### Please feel free to remove inapplicable items for your PR. - [ ] The PR title starts with [MXNET-$JIRA_ID], where $JIRA_ID refers to the relevant [JIRA issue](https://issues.apache.org/jira/projects/MXNET/issues) created (except PRs with tiny changes) - [ ] Changes are complete (i.e. I finished coding on this PR) - [ ] All changes have test coverage: - Unit tests are added for small changes to verify correctness (e.g. adding a new operator) - Nightly tests are added for complicated/long-running ones (e.g. changing distributed kvstore) - Build tests will be added for build configuration changes (e.g. adding a new build option with NCCL) - [ ] Code is well-documented: - For user-facing API changes, API doc string has been updated. - For new C++ functions in header files, their functionalities and arguments are documented. - For new examples, README.md is added to explain the what the example does, the source of the dataset, expected performance on test set and reference to the original paper if applicable - Check the API doc at http://mxnet-ci-doc.s3-accelerate.dualstack.amazonaws.com/PR-$PR_ID/$BUILD_ID/index.html - [ ] To the my best knowledge, examples are either not affected by this change, or have been fixed to be compatible with this change ### Changes ### - [x] Custom CPU kernel for best performance on CPU - [x] Custom GPU kernel for best performance on GPU ## Comments ## benchmark results: CPU - forward only (ms): 26.154723167419434->25.8462176322937 ~1x speedup - forward+backward (ms): 63094.7536945343->57.216822385787964 ~1103x speedup GPU: - forward only (ms): 52.20915079116821->4.262630462646484 ~12.25x speedup - forward+backward (ms): 36445.19102573395->14.284788131713867 ~2551x speedup ```Python import mxnet as mx # uncomment line to use corresponding ctx # ctx = mx.cpu() # ctx = mx.gpu(0) orig_row = 40000 new_row = 20000 col = 512 import random indices = [i for i in range(orig_row)] random.shuffle(indices) indices = mx.nd.array(indices[0:new_row], ctx=ctx, dtype='int32') from mxnet.test_utils import check_speed, rand_ndarray mx_orig = rand_ndarray((orig_row, col)).as_in_context(ctx) mx_new = rand_ndarray((new_row, col)).as_in_context(ctx) orig = mx.sym.Variable("orig") idx = mx.sym.Variable("idx") new = mx.sym.Variable("new") mx_sym = mx.sym.contrib.index_copy(old_tensor=orig, index_vector=idx, new_tensor=new) print(check_speed(mx_sym, typ='forward', location={"orig": mx_orig, "idx": indices, "new": mx_new}, ctx=ctx, N=1000) * 1000) print(check_speed(mx_sym, typ='whole', location={"orig": mx_orig, "idx": indices, "new": mx_new}, ctx=ctx, N=10) * 1000) ```
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