http://git-wip-us.apache.org/repos/asf/incubator-omid-site/blob/3a40a657/xref-test/org/apache/omid/transaction/TestCellUtils.html
----------------------------------------------------------------------
diff --git a/xref-test/org/apache/omid/transaction/TestCellUtils.html 
b/xref-test/org/apache/omid/transaction/TestCellUtils.html
index bc7d448..a0cb870 100644
--- a/xref-test/org/apache/omid/transaction/TestCellUtils.html
+++ b/xref-test/org/apache/omid/transaction/TestCellUtils.html
@@ -8,31 +8,31 @@
 <body>
 <div id="overview"><a 
href="../../../../../../target/site/testapidocs/org/apache/omid/transaction/TestCellUtils.html">View
 Javadoc</a></div><pre>
 
-<a class="jxr_linenumber" name="1" href="#1">1</a>   <em 
class="jxr_javadoccomment">/**</em>
-<a class="jxr_linenumber" name="2" href="#2">2</a>   <em 
class="jxr_javadoccomment"> * Licensed to the Apache Software Foundation (ASF) 
under one</em>
-<a class="jxr_linenumber" name="3" href="#3">3</a>   <em 
class="jxr_javadoccomment"> * or more contributor license agreements.  See the 
NOTICE file</em>
-<a class="jxr_linenumber" name="4" href="#4">4</a>   <em 
class="jxr_javadoccomment"> * distributed with this work for additional 
information</em>
-<a class="jxr_linenumber" name="5" href="#5">5</a>   <em 
class="jxr_javadoccomment"> * regarding copyright ownership.  The ASF licenses 
this file</em>
-<a class="jxr_linenumber" name="6" href="#6">6</a>   <em 
class="jxr_javadoccomment"> * to you under the Apache License, Version 2.0 
(the</em>
-<a class="jxr_linenumber" name="7" href="#7">7</a>   <em 
class="jxr_javadoccomment"> * "License"); you may not use this file except in 
compliance</em>
-<a class="jxr_linenumber" name="8" href="#8">8</a>   <em 
class="jxr_javadoccomment"> * with the License.  You may obtain a copy of the 
License at</em>
-<a class="jxr_linenumber" name="9" href="#9">9</a>   <em 
class="jxr_javadoccomment"> *</em>
-<a class="jxr_linenumber" name="10" href="#10">10</a>  <em 
class="jxr_javadoccomment"> *   <a 
href="http://www.apache.org/licenses/LICENSE-2.0"; 
target="alexandria_uri">http://www.apache.org/licenses/LICENSE-2.0</a></em>
-<a class="jxr_linenumber" name="11" href="#11">11</a>  <em 
class="jxr_javadoccomment"> *</em>
-<a class="jxr_linenumber" name="12" href="#12">12</a>  <em 
class="jxr_javadoccomment"> * Unless required by applicable law or agreed to in 
writing, software</em>
-<a class="jxr_linenumber" name="13" href="#13">13</a>  <em 
class="jxr_javadoccomment"> * distributed under the License is distributed on 
an "AS IS" BASIS,</em>
-<a class="jxr_linenumber" name="14" href="#14">14</a>  <em 
class="jxr_javadoccomment"> * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, 
either express or implied.</em>
-<a class="jxr_linenumber" name="15" href="#15">15</a>  <em 
class="jxr_javadoccomment"> * See the License for the specific language 
governing permissions and</em>
-<a class="jxr_linenumber" name="16" href="#16">16</a>  <em 
class="jxr_javadoccomment"> * limitations under the License.</em>
-<a class="jxr_linenumber" name="17" href="#17">17</a>  <em 
class="jxr_javadoccomment"> */</em>
+<a class="jxr_linenumber" name="1" href="#1">1</a>   <em 
class="jxr_comment">/*</em>
+<a class="jxr_linenumber" name="2" href="#2">2</a>   <em class="jxr_comment"> 
* Licensed to the Apache Software Foundation (ASF) under one</em>
+<a class="jxr_linenumber" name="3" href="#3">3</a>   <em class="jxr_comment"> 
* or more contributor license agreements.  See the NOTICE file</em>
+<a class="jxr_linenumber" name="4" href="#4">4</a>   <em class="jxr_comment"> 
* distributed with this work for additional information</em>
+<a class="jxr_linenumber" name="5" href="#5">5</a>   <em class="jxr_comment"> 
* regarding copyright ownership.  The ASF licenses this file</em>
+<a class="jxr_linenumber" name="6" href="#6">6</a>   <em class="jxr_comment"> 
* to you under the Apache License, Version 2.0 (the</em>
+<a class="jxr_linenumber" name="7" href="#7">7</a>   <em class="jxr_comment"> 
* "License"); you may not use this file except in compliance</em>
+<a class="jxr_linenumber" name="8" href="#8">8</a>   <em class="jxr_comment"> 
* with the License.  You may obtain a copy of the License at</em>
+<a class="jxr_linenumber" name="9" href="#9">9</a>   <em class="jxr_comment"> 
*</em>
+<a class="jxr_linenumber" name="10" href="#10">10</a>  <em 
class="jxr_comment"> *   <a href="http://www.apache.org/licenses/LICENSE-2.0"; 
target="alexandria_uri">http://www.apache.org/licenses/LICENSE-2.0</a></em>
+<a class="jxr_linenumber" name="11" href="#11">11</a>  <em 
class="jxr_comment"> *</em>
+<a class="jxr_linenumber" name="12" href="#12">12</a>  <em 
class="jxr_comment"> * Unless required by applicable law or agreed to in 
writing, software</em>
+<a class="jxr_linenumber" name="13" href="#13">13</a>  <em 
class="jxr_comment"> * distributed under the License is distributed on an "AS 
IS" BASIS,</em>
+<a class="jxr_linenumber" name="14" href="#14">14</a>  <em 
class="jxr_comment"> * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either 
express or implied.</em>
+<a class="jxr_linenumber" name="15" href="#15">15</a>  <em 
class="jxr_comment"> * See the License for the specific language governing 
permissions and</em>
+<a class="jxr_linenumber" name="16" href="#16">16</a>  <em 
class="jxr_comment"> * limitations under the License.</em>
+<a class="jxr_linenumber" name="17" href="#17">17</a>  <em 
class="jxr_comment"> */</em>
 <a class="jxr_linenumber" name="18" href="#18">18</a>  <strong 
class="jxr_keyword">package</strong> org.apache.omid.transaction;
 <a class="jxr_linenumber" name="19" href="#19">19</a>  
 <a class="jxr_linenumber" name="20" href="#20">20</a>  <strong 
class="jxr_keyword">import</strong> com.google.common.base.Optional;
-<a class="jxr_linenumber" name="21" href="#21">21</a>  <strong 
class="jxr_keyword">import</strong> org.apache.omid.HBaseShims;
-<a class="jxr_linenumber" name="22" href="#22">22</a>  <strong 
class="jxr_keyword">import</strong> org.apache.hadoop.hbase.Cell;
-<a class="jxr_linenumber" name="23" href="#23">23</a>  <strong 
class="jxr_keyword">import</strong> org.apache.hadoop.hbase.KeyValue;
-<a class="jxr_linenumber" name="24" href="#24">24</a>  <strong 
class="jxr_keyword">import</strong> org.apache.hadoop.hbase.KeyValue.Type;
-<a class="jxr_linenumber" name="25" href="#25">25</a>  <strong 
class="jxr_keyword">import</strong> org.apache.hadoop.hbase.util.Bytes;
+<a class="jxr_linenumber" name="21" href="#21">21</a>  <strong 
class="jxr_keyword">import</strong> org.apache.hadoop.hbase.Cell;
+<a class="jxr_linenumber" name="22" href="#22">22</a>  <strong 
class="jxr_keyword">import</strong> org.apache.hadoop.hbase.KeyValue;
+<a class="jxr_linenumber" name="23" href="#23">23</a>  <strong 
class="jxr_keyword">import</strong> org.apache.hadoop.hbase.KeyValue.Type;
+<a class="jxr_linenumber" name="24" href="#24">24</a>  <strong 
class="jxr_keyword">import</strong> org.apache.hadoop.hbase.util.Bytes;
+<a class="jxr_linenumber" name="25" href="#25">25</a>  <strong 
class="jxr_keyword">import</strong> org.apache.omid.HBaseShims;
 <a class="jxr_linenumber" name="26" href="#26">26</a>  <strong 
class="jxr_keyword">import</strong> org.testng.annotations.DataProvider;
 <a class="jxr_linenumber" name="27" href="#27">27</a>  <strong 
class="jxr_keyword">import</strong> org.testng.annotations.Test;
 <a class="jxr_linenumber" name="28" href="#28">28</a>  
@@ -42,10 +42,10 @@
 <a class="jxr_linenumber" name="32" href="#32">32</a>  <strong 
class="jxr_keyword">import</strong> java.util.SortedMap;
 <a class="jxr_linenumber" name="33" href="#33">33</a>  
 <a class="jxr_linenumber" name="34" href="#34">34</a>  <strong 
class="jxr_keyword">import</strong> <strong class="jxr_keyword">static</strong> 
org.apache.omid.transaction.CellUtils.SHADOW_CELL_SUFFIX;
-<a class="jxr_linenumber" name="35" href="#35">35</a>  <strong 
class="jxr_keyword">import</strong> <strong class="jxr_keyword">static</strong> 
org.testng.AssertJUnit.assertEquals;
-<a class="jxr_linenumber" name="36" href="#36">36</a>  <strong 
class="jxr_keyword">import</strong> <strong class="jxr_keyword">static</strong> 
org.testng.AssertJUnit.assertFalse;
-<a class="jxr_linenumber" name="37" href="#37">37</a>  <strong 
class="jxr_keyword">import</strong> <strong class="jxr_keyword">static</strong> 
org.testng.AssertJUnit.assertTrue;
-<a class="jxr_linenumber" name="38" href="#38">38</a>  <strong 
class="jxr_keyword">import</strong> <strong class="jxr_keyword">static</strong> 
org.testng.AssertJUnit.fail;
+<a class="jxr_linenumber" name="35" href="#35">35</a>  <strong 
class="jxr_keyword">import</strong> <strong class="jxr_keyword">static</strong> 
org.testng.Assert.assertEquals;
+<a class="jxr_linenumber" name="36" href="#36">36</a>  <strong 
class="jxr_keyword">import</strong> <strong class="jxr_keyword">static</strong> 
org.testng.Assert.assertFalse;
+<a class="jxr_linenumber" name="37" href="#37">37</a>  <strong 
class="jxr_keyword">import</strong> <strong class="jxr_keyword">static</strong> 
org.testng.Assert.assertTrue;
+<a class="jxr_linenumber" name="38" href="#38">38</a>  <strong 
class="jxr_keyword">import</strong> <strong class="jxr_keyword">static</strong> 
org.testng.Assert.fail;
 <a class="jxr_linenumber" name="39" href="#39">39</a>  
 <a class="jxr_linenumber" name="40" href="#40">40</a>  @Test(groups = <span 
class="jxr_string">"noHBase"</span>)
 <a class="jxr_linenumber" name="41" href="#41">41</a>  <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">class</strong> 
<a 
href="../../../../org/apache/omid/transaction/TestCellUtils.html">TestCellUtils</a>
 {
@@ -62,7 +62,7 @@
 <a class="jxr_linenumber" name="52" href="#52">52</a>          };
 <a class="jxr_linenumber" name="53" href="#53">53</a>      }
 <a class="jxr_linenumber" name="54" href="#54">54</a>  
-<a class="jxr_linenumber" name="55" href="#55">55</a>      @Test(dataProvider 
= <span class="jxr_string">"shadow-cell-suffixes"</span>)
+<a class="jxr_linenumber" name="55" href="#55">55</a>      @Test(dataProvider 
= <span class="jxr_string">"shadow-cell-suffixes"</span>, timeOut = 10_000)
 <a class="jxr_linenumber" name="56" href="#56">56</a>      <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">void</strong> 
testShadowCellQualifiers(byte[] shadowCellSuffixToTest) <strong 
class="jxr_keyword">throws</strong> IOException {
 <a class="jxr_linenumber" name="57" href="#57">57</a>  
 <a class="jxr_linenumber" name="58" href="#58">58</a>          <strong 
class="jxr_keyword">final</strong> byte[] validShadowCellQualifier =
@@ -72,172 +72,171 @@
 <a class="jxr_linenumber" name="62" href="#62">62</a>          <strong 
class="jxr_keyword">final</strong> byte[] doubleEndedValidShadowCellQualifier =
 <a class="jxr_linenumber" name="63" href="#63">63</a>                  
com.google.common.primitives.Bytes.concat(validShadowCellQualifier, 
shadowCellSuffixToTest);
 <a class="jxr_linenumber" name="64" href="#64">64</a>          <strong 
class="jxr_keyword">final</strong> byte[] interleavedValidShadowCellQualifier =
-<a class="jxr_linenumber" name="65" href="#65">65</a>                  
com.google.common.primitives.Bytes.concat(validShadowCellQualifier,
-<a class="jxr_linenumber" name="66" href="#66">66</a>                          
com.google.common.primitives.Bytes
-<a class="jxr_linenumber" name="67" href="#67">67</a>                          
        .concat(validShadowCellQualifier, validShadowCellQualifier));
-<a class="jxr_linenumber" name="68" href="#68">68</a>          <strong 
class="jxr_keyword">final</strong> byte[] value = Bytes.toBytes(<span 
class="jxr_string">"test-value"</span>);
-<a class="jxr_linenumber" name="69" href="#69">69</a>  
-<a class="jxr_linenumber" name="70" href="#70">70</a>          <em 
class="jxr_comment">// Test the qualifier passed is a shadow cell</em>
-<a class="jxr_linenumber" name="71" href="#71">71</a>          <em 
class="jxr_comment">// qualifier because it contains only one suffix</em>
-<a class="jxr_linenumber" name="72" href="#72">72</a>          <em 
class="jxr_comment">// and is placed at the end of the qualifier:</em>
-<a class="jxr_linenumber" name="73" href="#73">73</a>          <em 
class="jxr_comment">// qual_nameSUFFIX</em>
-<a class="jxr_linenumber" name="74" href="#74">74</a>          KeyValue kv = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, 
validShadowCellQualifier, value);
-<a class="jxr_linenumber" name="75" href="#75">75</a>          
assertTrue(<span class="jxr_string">"Should include a valid shadowCell 
identifier"</span>, CellUtils.isShadowCell(kv));
-<a class="jxr_linenumber" name="76" href="#76">76</a>  
-<a class="jxr_linenumber" name="77" href="#77">77</a>          <em 
class="jxr_comment">// We also accept this pattern in the qualifier:</em>
-<a class="jxr_linenumber" name="78" href="#78">78</a>          <em 
class="jxr_comment">// SUFFIXqual_nameSUFFIX</em>
-<a class="jxr_linenumber" name="79" href="#79">79</a>          kv = <strong 
class="jxr_keyword">new</strong> KeyValue(row, family, 
sandwichValidShadowCellQualifier, value);
-<a class="jxr_linenumber" name="80" href="#80">80</a>          
assertTrue(<span class="jxr_string">"Should include a valid shadowCell 
identifier"</span>, CellUtils.isShadowCell(kv));
-<a class="jxr_linenumber" name="81" href="#81">81</a>  
-<a class="jxr_linenumber" name="82" href="#82">82</a>          <em 
class="jxr_comment">// We also accept this pattern in the qualifier:</em>
-<a class="jxr_linenumber" name="83" href="#83">83</a>          <em 
class="jxr_comment">// qual_nameSUFFIXSUFFIX</em>
-<a class="jxr_linenumber" name="84" href="#84">84</a>          kv = <strong 
class="jxr_keyword">new</strong> KeyValue(row, family, 
doubleEndedValidShadowCellQualifier, value);
-<a class="jxr_linenumber" name="85" href="#85">85</a>          
assertTrue(<span class="jxr_string">"Should include a valid shadowCell 
identifier"</span>, CellUtils.isShadowCell(kv));
-<a class="jxr_linenumber" name="86" href="#86">86</a>  
-<a class="jxr_linenumber" name="87" href="#87">87</a>          <em 
class="jxr_comment">// We also accept this pattern in the qualifier:</em>
-<a class="jxr_linenumber" name="88" href="#88">88</a>          <em 
class="jxr_comment">// qual_nameSUFFIXqual_nameSUFFIXqual_nameSUFFIX</em>
-<a class="jxr_linenumber" name="89" href="#89">89</a>          kv = <strong 
class="jxr_keyword">new</strong> KeyValue(row, family, 
interleavedValidShadowCellQualifier, value);
-<a class="jxr_linenumber" name="90" href="#90">90</a>          
assertTrue(<span class="jxr_string">"Should include a valid shadowCell 
identifier"</span>, CellUtils.isShadowCell(kv));
-<a class="jxr_linenumber" name="91" href="#91">91</a>  
-<a class="jxr_linenumber" name="92" href="#92">92</a>          <em 
class="jxr_comment">// Test the qualifier passed is not a shadow cell</em>
-<a class="jxr_linenumber" name="93" href="#93">93</a>          <em 
class="jxr_comment">// qualifier if there's nothing else apart from the 
suffix</em>
-<a class="jxr_linenumber" name="94" href="#94">94</a>          kv = <strong 
class="jxr_keyword">new</strong> KeyValue(row, family, shadowCellSuffixToTest, 
value);
-<a class="jxr_linenumber" name="95" href="#95">95</a>          
assertFalse(<span class="jxr_string">"Should not include a valid shadowCell 
identifier"</span>, CellUtils.isShadowCell(kv));
-<a class="jxr_linenumber" name="96" href="#96">96</a>  
-<a class="jxr_linenumber" name="97" href="#97">97</a>      }
-<a class="jxr_linenumber" name="98" href="#98">98</a>  
-<a class="jxr_linenumber" name="99" href="#99">99</a>      @Test
-<a class="jxr_linenumber" name="100" href="#100">100</a>     <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">void</strong> 
testCorrectMapingOfCellsToShadowCells() <strong 
class="jxr_keyword">throws</strong> IOException {
-<a class="jxr_linenumber" name="101" href="#101">101</a>         <em 
class="jxr_comment">// Create the required data</em>
-<a class="jxr_linenumber" name="102" href="#102">102</a>         <strong 
class="jxr_keyword">final</strong> byte[] validShadowCellQualifier =
-<a class="jxr_linenumber" name="103" href="#103">103</a>                 
com.google.common.primitives.Bytes.concat(qualifier, SHADOW_CELL_SUFFIX);
-<a class="jxr_linenumber" name="104" href="#104">104</a> 
-<a class="jxr_linenumber" name="105" href="#105">105</a>         <strong 
class="jxr_keyword">final</strong> byte[] qualifier2 = Bytes.toBytes(<span 
class="jxr_string">"test-qual2"</span>);
-<a class="jxr_linenumber" name="106" href="#106">106</a>         <strong 
class="jxr_keyword">final</strong> byte[] validShadowCellQualifier2 =
-<a class="jxr_linenumber" name="107" href="#107">107</a>                 
com.google.common.primitives.Bytes.concat(qualifier2, SHADOW_CELL_SUFFIX);
-<a class="jxr_linenumber" name="108" href="#108">108</a> 
-<a class="jxr_linenumber" name="109" href="#109">109</a>         <strong 
class="jxr_keyword">final</strong> byte[] qualifier3 = Bytes.toBytes(<span 
class="jxr_string">"test-qual3"</span>);
-<a class="jxr_linenumber" name="110" href="#110">110</a> 
-<a class="jxr_linenumber" name="111" href="#111">111</a>         Cell cell1 = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier, 1, 
Bytes.toBytes(<span class="jxr_string">"value"</span>)); <em 
class="jxr_comment">// Default type is Put</em>
-<a class="jxr_linenumber" name="112" href="#112">112</a>         Cell dupCell1 
= <strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier, 1, 
Bytes.toBytes(<span class="jxr_string">"value"</span>)); <em 
class="jxr_comment">// Default type is Put</em>
-<a class="jxr_linenumber" name="113" href="#113">113</a>         Cell 
dupCell1WithAnotherValue = <strong class="jxr_keyword">new</strong> 
KeyValue(row, family, qualifier, 1, Bytes.toBytes(<span 
class="jxr_string">"other-value"</span>));
-<a class="jxr_linenumber" name="114" href="#114">114</a>         Cell delCell1 
= <strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier, 1, 
Type.Delete, Bytes.toBytes(<span class="jxr_string">"value"</span>));
-<a class="jxr_linenumber" name="115" href="#115">115</a>         Cell 
shadowCell1 = <strong class="jxr_keyword">new</strong> KeyValue(row, family, 
validShadowCellQualifier, 1, Bytes.toBytes(<span 
class="jxr_string">"sc-value"</span>));
-<a class="jxr_linenumber" name="116" href="#116">116</a> 
-<a class="jxr_linenumber" name="117" href="#117">117</a>         Cell cell2 = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier2, 1, 
Bytes.toBytes(<span class="jxr_string">"value2"</span>));
-<a class="jxr_linenumber" name="118" href="#118">118</a>         Cell 
shadowCell2 = <strong class="jxr_keyword">new</strong> KeyValue(row, family, 
validShadowCellQualifier2, 1, Bytes.toBytes(<span 
class="jxr_string">"sc-value2"</span>));
-<a class="jxr_linenumber" name="119" href="#119">119</a> 
-<a class="jxr_linenumber" name="120" href="#120">120</a>         Cell cell3 = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier3, 1, 
Bytes.toBytes(<span class="jxr_string">"value3"</span>));
-<a class="jxr_linenumber" name="121" href="#121">121</a> 
-<a class="jxr_linenumber" name="122" href="#122">122</a>         <em 
class="jxr_comment">// Check a list of cells with duplicate values</em>
-<a class="jxr_linenumber" name="123" href="#123">123</a>         
List&lt;Cell&gt; badListWithDups = <strong class="jxr_keyword">new</strong> 
ArrayList&lt;&gt;();
-<a class="jxr_linenumber" name="124" href="#124">124</a>         
badListWithDups.add(cell1);
-<a class="jxr_linenumber" name="125" href="#125">125</a>         
badListWithDups.add(dupCell1WithAnotherValue);
-<a class="jxr_linenumber" name="126" href="#126">126</a> 
-<a class="jxr_linenumber" name="127" href="#127">127</a>         <em 
class="jxr_comment">// Check dup shadow cell with same MVCC is ignored</em>
-<a class="jxr_linenumber" name="128" href="#128">128</a>         
SortedMap&lt;Cell, Optional&lt;Cell&gt;&gt; cellsToShadowCells = 
CellUtils.mapCellsToShadowCells(badListWithDups);
-<a class="jxr_linenumber" name="129" href="#129">129</a>         
assertEquals(<span class="jxr_string">"There should be only 1 key-value 
maps"</span>, 1, cellsToShadowCells.size());
-<a class="jxr_linenumber" name="130" href="#130">130</a>         
assertTrue(cellsToShadowCells.containsKey(cell1));
-<a class="jxr_linenumber" name="131" href="#131">131</a>         KeyValue 
firstKey = (KeyValue) cellsToShadowCells.firstKey();
-<a class="jxr_linenumber" name="132" href="#132">132</a>         KeyValue 
lastKey = (KeyValue) cellsToShadowCells.lastKey();
-<a class="jxr_linenumber" name="133" href="#133">133</a>         
assertTrue(firstKey.equals(lastKey));
-<a class="jxr_linenumber" name="134" href="#134">134</a>         
assertTrue(<span class="jxr_string">"Should be equal"</span>, 0 == 
Bytes.compareTo(
-<a class="jxr_linenumber" name="135" href="#135">135</a>                 
firstKey.getValueArray(), firstKey.getValueOffset(), firstKey.getValueLength(),
-<a class="jxr_linenumber" name="136" href="#136">136</a>                 
cell1.getValueArray(), cell1.getValueOffset(), cell1.getValueLength()));
-<a class="jxr_linenumber" name="137" href="#137">137</a> 
-<a class="jxr_linenumber" name="138" href="#138">138</a>         <em 
class="jxr_comment">// Modify dup shadow cell to have a greater MVCC and check 
that is replaced</em>
-<a class="jxr_linenumber" name="139" href="#139">139</a>         
HBaseShims.setKeyValueSequenceId((KeyValue) dupCell1WithAnotherValue, 1);
-<a class="jxr_linenumber" name="140" href="#140">140</a>         
cellsToShadowCells = CellUtils.mapCellsToShadowCells(badListWithDups);
-<a class="jxr_linenumber" name="141" href="#141">141</a>         
assertEquals(<span class="jxr_string">"There should be only 1 key-value 
maps"</span>, 1, cellsToShadowCells.size());
-<a class="jxr_linenumber" name="142" href="#142">142</a>         
assertTrue(cellsToShadowCells.containsKey(dupCell1WithAnotherValue));
-<a class="jxr_linenumber" name="143" href="#143">143</a>         firstKey = 
(KeyValue) cellsToShadowCells.firstKey();
-<a class="jxr_linenumber" name="144" href="#144">144</a>         lastKey = 
(KeyValue) cellsToShadowCells.lastKey();
-<a class="jxr_linenumber" name="145" href="#145">145</a>         
assertTrue(firstKey.equals(lastKey));
-<a class="jxr_linenumber" name="146" href="#146">146</a>         
assertTrue(<span class="jxr_string">"Should be equal"</span>, 0 == 
Bytes.compareTo(
-<a class="jxr_linenumber" name="147" href="#147">147</a>                 
firstKey.getValueArray(), firstKey.getValueOffset(), firstKey.getValueLength(),
-<a class="jxr_linenumber" name="148" href="#148">148</a>                 
dupCell1WithAnotherValue.getValueArray(), 
dupCell1WithAnotherValue.getValueOffset(),
-<a class="jxr_linenumber" name="149" href="#149">149</a>                 
dupCell1WithAnotherValue.getValueLength()));
-<a class="jxr_linenumber" name="150" href="#150">150</a>         <em 
class="jxr_comment">// Check a list of cells with duplicate values</em>
-<a class="jxr_linenumber" name="151" href="#151">151</a>         
List&lt;Cell&gt; cellListWithDups = <strong class="jxr_keyword">new</strong> 
ArrayList&lt;&gt;();
-<a class="jxr_linenumber" name="152" href="#152">152</a>         
cellListWithDups.add(cell1);
-<a class="jxr_linenumber" name="153" href="#153">153</a>         
cellListWithDups.add(shadowCell1);
-<a class="jxr_linenumber" name="154" href="#154">154</a>         
cellListWithDups.add(dupCell1); <em class="jxr_comment">// Dup cell</em>
-<a class="jxr_linenumber" name="155" href="#155">155</a>         
cellListWithDups.add(delCell1); <em class="jxr_comment">// Another Dup cell but 
with different type</em>
-<a class="jxr_linenumber" name="156" href="#156">156</a>         
cellListWithDups.add(cell2);
-<a class="jxr_linenumber" name="157" href="#157">157</a>         
cellListWithDups.add(cell3);
-<a class="jxr_linenumber" name="158" href="#158">158</a>         
cellListWithDups.add(shadowCell2);
-<a class="jxr_linenumber" name="159" href="#159">159</a> 
-<a class="jxr_linenumber" name="160" href="#160">160</a>         
cellsToShadowCells = CellUtils.mapCellsToShadowCells(cellListWithDups);
-<a class="jxr_linenumber" name="161" href="#161">161</a>         
assertEquals(<span class="jxr_string">"There should be only 3 key-value 
maps"</span>, 3, cellsToShadowCells.size());
-<a class="jxr_linenumber" name="162" href="#162">162</a>         
assertTrue(cellsToShadowCells.get(cell1).get().equals(shadowCell1));
-<a class="jxr_linenumber" name="163" href="#163">163</a>         
assertTrue(cellsToShadowCells.get(dupCell1).get().equals(shadowCell1));
-<a class="jxr_linenumber" name="164" href="#164">164</a>         
assertFalse(cellsToShadowCells.containsKey(delCell1)); <em 
class="jxr_comment">// TODO This is strange and needs to be solved.</em>
-<a class="jxr_linenumber" name="165" href="#165">165</a>         <em 
class="jxr_comment">// The current algo avoids to put the delete cell</em>
-<a class="jxr_linenumber" name="166" href="#166">166</a>         <em 
class="jxr_comment">// as key after the put cell with same value was added</em>
-<a class="jxr_linenumber" name="167" href="#167">167</a>         
assertTrue(cellsToShadowCells.get(cell2).get().equals(shadowCell2));
-<a class="jxr_linenumber" name="168" href="#168">168</a>         
assertTrue(cellsToShadowCells.get(cell3).equals(Optional.absent()));
-<a class="jxr_linenumber" name="169" href="#169">169</a> 
-<a class="jxr_linenumber" name="170" href="#170">170</a>     }
-<a class="jxr_linenumber" name="171" href="#171">171</a> 
-<a class="jxr_linenumber" name="172" href="#172">172</a>     @Test
-<a class="jxr_linenumber" name="173" href="#173">173</a>     <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">void</strong> 
testShadowCellSuffixConcatenationToQualifier() {
-<a class="jxr_linenumber" name="174" href="#174">174</a> 
-<a class="jxr_linenumber" name="175" href="#175">175</a>         Cell cell = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier, 1, 
Bytes.toBytes(<span class="jxr_string">"value"</span>));
-<a class="jxr_linenumber" name="176" href="#176">176</a>         byte[] 
suffixedQualifier = CellUtils.addShadowCellSuffix(cell.getQualifierArray(),
-<a class="jxr_linenumber" name="177" href="#177">177</a>                 
cell.getQualifierOffset(),
-<a class="jxr_linenumber" name="178" href="#178">178</a>                 
cell.getQualifierLength());
-<a class="jxr_linenumber" name="179" href="#179">179</a>         byte[] 
expectedQualifier = com.google.common.primitives.Bytes.concat(qualifier, 
SHADOW_CELL_SUFFIX);
-<a class="jxr_linenumber" name="180" href="#180">180</a>         
assertEquals(expectedQualifier, suffixedQualifier);
-<a class="jxr_linenumber" name="181" href="#181">181</a> 
-<a class="jxr_linenumber" name="182" href="#182">182</a>     }
-<a class="jxr_linenumber" name="183" href="#183">183</a> 
-<a class="jxr_linenumber" name="184" href="#184">184</a>     
@Test(dataProvider = <span class="jxr_string">"shadow-cell-suffixes"</span>)
-<a class="jxr_linenumber" name="185" href="#185">185</a>     <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">void</strong> 
testShadowCellSuffixRemovalFromQualifier(byte[] shadowCellSuffixToTest) <strong 
class="jxr_keyword">throws</strong> IOException {
-<a class="jxr_linenumber" name="186" href="#186">186</a> 
-<a class="jxr_linenumber" name="187" href="#187">187</a>         <em 
class="jxr_comment">// Test removal from a correclty suffixed qualifier</em>
-<a class="jxr_linenumber" name="188" href="#188">188</a>         byte[] 
suffixedQualifier = com.google.common.primitives.Bytes.concat(qualifier, 
shadowCellSuffixToTest);
-<a class="jxr_linenumber" name="189" href="#189">189</a>         Cell cell = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, 
suffixedQualifier, 1, Bytes.toBytes(<span class="jxr_string">"value"</span>));
-<a class="jxr_linenumber" name="190" href="#190">190</a>         byte[] 
resultedQualifier = CellUtils.removeShadowCellSuffix(cell.getQualifierArray(),
-<a class="jxr_linenumber" name="191" href="#191">191</a>                 
cell.getQualifierOffset(),
-<a class="jxr_linenumber" name="192" href="#192">192</a>                 
cell.getQualifierLength());
-<a class="jxr_linenumber" name="193" href="#193">193</a>         byte[] 
expectedQualifier = qualifier;
-<a class="jxr_linenumber" name="194" href="#194">194</a>         
assertEquals(expectedQualifier, resultedQualifier);
-<a class="jxr_linenumber" name="195" href="#195">195</a> 
-<a class="jxr_linenumber" name="196" href="#196">196</a>         <em 
class="jxr_comment">// Test removal from a badly suffixed qualifier</em>
-<a class="jxr_linenumber" name="197" href="#197">197</a>         byte[] 
badlySuffixedQualifier = com.google.common.primitives.Bytes.concat(qualifier, 
Bytes.toBytes(<span class="jxr_string">"BAD"</span>));
-<a class="jxr_linenumber" name="198" href="#198">198</a>         Cell badCell 
= <strong class="jxr_keyword">new</strong> KeyValue(row, family, 
badlySuffixedQualifier, 1, Bytes.toBytes(<span 
class="jxr_string">"value"</span>));
-<a class="jxr_linenumber" name="199" href="#199">199</a>         <strong 
class="jxr_keyword">try</strong> {
-<a class="jxr_linenumber" name="200" href="#200">200</a>             
CellUtils.removeShadowCellSuffix(badCell.getQualifierArray(),
-<a class="jxr_linenumber" name="201" href="#201">201</a>                     
badCell.getQualifierOffset(),
-<a class="jxr_linenumber" name="202" href="#202">202</a>                     
badCell.getQualifierLength());
-<a class="jxr_linenumber" name="203" href="#203">203</a>             fail();
-<a class="jxr_linenumber" name="204" href="#204">204</a>         } <strong 
class="jxr_keyword">catch</strong> (IllegalArgumentException e) {
-<a class="jxr_linenumber" name="205" href="#205">205</a>             <em 
class="jxr_comment">// Expected</em>
-<a class="jxr_linenumber" name="206" href="#206">206</a>         }
-<a class="jxr_linenumber" name="207" href="#207">207</a>     }
-<a class="jxr_linenumber" name="208" href="#208">208</a> 
-<a class="jxr_linenumber" name="209" href="#209">209</a>     @Test
-<a class="jxr_linenumber" name="210" href="#210">210</a>     <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">void</strong> 
testMatchingQualifiers() {
-<a class="jxr_linenumber" name="211" href="#211">211</a>         Cell cell = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier, 1, 
Bytes.toBytes(<span class="jxr_string">"value"</span>));
-<a class="jxr_linenumber" name="212" href="#212">212</a>         
assertTrue(CellUtils.matchingQualifier(cell, qualifier, 0, qualifier.length));
-<a class="jxr_linenumber" name="213" href="#213">213</a>         
assertFalse(CellUtils.matchingQualifier(cell, otherQualifier, 0, 
otherQualifier.length));
-<a class="jxr_linenumber" name="214" href="#214">214</a>     }
-<a class="jxr_linenumber" name="215" href="#215">215</a> 
-<a class="jxr_linenumber" name="216" href="#216">216</a>     
@Test(dataProvider = <span class="jxr_string">"shadow-cell-suffixes"</span>)
-<a class="jxr_linenumber" name="217" href="#217">217</a>     <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">void</strong> 
testQualifierLengthFromShadowCellQualifier(byte[] shadowCellSuffixToTest) {
-<a class="jxr_linenumber" name="218" href="#218">218</a>         <em 
class="jxr_comment">// Test suffixed qualifier</em>
-<a class="jxr_linenumber" name="219" href="#219">219</a>         byte[] 
suffixedQualifier = com.google.common.primitives.Bytes.concat(qualifier, 
shadowCellSuffixToTest);
-<a class="jxr_linenumber" name="220" href="#220">220</a>         <strong 
class="jxr_keyword">int</strong> originalQualifierLength =
-<a class="jxr_linenumber" name="221" href="#221">221</a>                 
CellUtils.qualifierLengthFromShadowCellQualifier(suffixedQualifier, 0, 
suffixedQualifier.length);
-<a class="jxr_linenumber" name="222" href="#222">222</a>         
assertEquals(qualifier.length, originalQualifierLength);
-<a class="jxr_linenumber" name="223" href="#223">223</a> 
-<a class="jxr_linenumber" name="224" href="#224">224</a>         <em 
class="jxr_comment">// Test passing qualifier without shadow cell suffix</em>
-<a class="jxr_linenumber" name="225" href="#225">225</a>         
originalQualifierLength =
-<a class="jxr_linenumber" name="226" href="#226">226</a>                 
CellUtils.qualifierLengthFromShadowCellQualifier(qualifier, 0, 
qualifier.length);
-<a class="jxr_linenumber" name="227" href="#227">227</a>         
assertEquals(qualifier.length, originalQualifierLength);
-<a class="jxr_linenumber" name="228" href="#228">228</a>     }
-<a class="jxr_linenumber" name="229" href="#229">229</a> 
-<a class="jxr_linenumber" name="230" href="#230">230</a> }
+<a class="jxr_linenumber" name="65" href="#65">65</a>                  
com.google.common.primitives.Bytes.concat(validShadowCellQualifier, 
com.google.common.primitives.Bytes
+<a class="jxr_linenumber" name="66" href="#66">66</a>                          
.concat(validShadowCellQualifier, validShadowCellQualifier));
+<a class="jxr_linenumber" name="67" href="#67">67</a>          <strong 
class="jxr_keyword">final</strong> byte[] value = Bytes.toBytes(<span 
class="jxr_string">"test-value"</span>);
+<a class="jxr_linenumber" name="68" href="#68">68</a>  
+<a class="jxr_linenumber" name="69" href="#69">69</a>          <em 
class="jxr_comment">// Test the qualifier passed is a shadow cell</em>
+<a class="jxr_linenumber" name="70" href="#70">70</a>          <em 
class="jxr_comment">// qualifier because it contains only one suffix</em>
+<a class="jxr_linenumber" name="71" href="#71">71</a>          <em 
class="jxr_comment">// and is placed at the end of the qualifier:</em>
+<a class="jxr_linenumber" name="72" href="#72">72</a>          <em 
class="jxr_comment">// qual_nameSUFFIX</em>
+<a class="jxr_linenumber" name="73" href="#73">73</a>          KeyValue kv = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, 
validShadowCellQualifier, value);
+<a class="jxr_linenumber" name="74" href="#74">74</a>          
assertTrue(CellUtils.isShadowCell(kv), <span class="jxr_string">"Should include 
a valid shadowCell identifier"</span>);
+<a class="jxr_linenumber" name="75" href="#75">75</a>  
+<a class="jxr_linenumber" name="76" href="#76">76</a>          <em 
class="jxr_comment">// We also accept this pattern in the qualifier:</em>
+<a class="jxr_linenumber" name="77" href="#77">77</a>          <em 
class="jxr_comment">// SUFFIXqual_nameSUFFIX</em>
+<a class="jxr_linenumber" name="78" href="#78">78</a>          kv = <strong 
class="jxr_keyword">new</strong> KeyValue(row, family, 
sandwichValidShadowCellQualifier, value);
+<a class="jxr_linenumber" name="79" href="#79">79</a>          
assertTrue(CellUtils.isShadowCell(kv), <span class="jxr_string">"Should include 
a valid shadowCell identifier"</span>);
+<a class="jxr_linenumber" name="80" href="#80">80</a>  
+<a class="jxr_linenumber" name="81" href="#81">81</a>          <em 
class="jxr_comment">// We also accept this pattern in the qualifier:</em>
+<a class="jxr_linenumber" name="82" href="#82">82</a>          <em 
class="jxr_comment">// qual_nameSUFFIXSUFFIX</em>
+<a class="jxr_linenumber" name="83" href="#83">83</a>          kv = <strong 
class="jxr_keyword">new</strong> KeyValue(row, family, 
doubleEndedValidShadowCellQualifier, value);
+<a class="jxr_linenumber" name="84" href="#84">84</a>          
assertTrue(CellUtils.isShadowCell(kv), <span class="jxr_string">"Should include 
a valid shadowCell identifier"</span>);
+<a class="jxr_linenumber" name="85" href="#85">85</a>  
+<a class="jxr_linenumber" name="86" href="#86">86</a>          <em 
class="jxr_comment">// We also accept this pattern in the qualifier:</em>
+<a class="jxr_linenumber" name="87" href="#87">87</a>          <em 
class="jxr_comment">// qual_nameSUFFIXqual_nameSUFFIXqual_nameSUFFIX</em>
+<a class="jxr_linenumber" name="88" href="#88">88</a>          kv = <strong 
class="jxr_keyword">new</strong> KeyValue(row, family, 
interleavedValidShadowCellQualifier, value);
+<a class="jxr_linenumber" name="89" href="#89">89</a>          
assertTrue(CellUtils.isShadowCell(kv), <span class="jxr_string">"Should include 
a valid shadowCell identifier"</span>);
+<a class="jxr_linenumber" name="90" href="#90">90</a>  
+<a class="jxr_linenumber" name="91" href="#91">91</a>          <em 
class="jxr_comment">// Test the qualifier passed is not a shadow cell</em>
+<a class="jxr_linenumber" name="92" href="#92">92</a>          <em 
class="jxr_comment">// qualifier if there's nothing else apart from the 
suffix</em>
+<a class="jxr_linenumber" name="93" href="#93">93</a>          kv = <strong 
class="jxr_keyword">new</strong> KeyValue(row, family, shadowCellSuffixToTest, 
value);
+<a class="jxr_linenumber" name="94" href="#94">94</a>          
assertFalse(CellUtils.isShadowCell(kv), <span class="jxr_string">"Should not 
include a valid shadowCell identifier"</span>);
+<a class="jxr_linenumber" name="95" href="#95">95</a>  
+<a class="jxr_linenumber" name="96" href="#96">96</a>      }
+<a class="jxr_linenumber" name="97" href="#97">97</a>  
+<a class="jxr_linenumber" name="98" href="#98">98</a>      @Test(timeOut = 
10_000)
+<a class="jxr_linenumber" name="99" href="#99">99</a>      <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">void</strong> 
testCorrectMapingOfCellsToShadowCells() <strong 
class="jxr_keyword">throws</strong> IOException {
+<a class="jxr_linenumber" name="100" href="#100">100</a>         <em 
class="jxr_comment">// Create the required data</em>
+<a class="jxr_linenumber" name="101" href="#101">101</a>         <strong 
class="jxr_keyword">final</strong> byte[] validShadowCellQualifier =
+<a class="jxr_linenumber" name="102" href="#102">102</a>                 
com.google.common.primitives.Bytes.concat(qualifier, SHADOW_CELL_SUFFIX);
+<a class="jxr_linenumber" name="103" href="#103">103</a> 
+<a class="jxr_linenumber" name="104" href="#104">104</a>         <strong 
class="jxr_keyword">final</strong> byte[] qualifier2 = Bytes.toBytes(<span 
class="jxr_string">"test-qual2"</span>);
+<a class="jxr_linenumber" name="105" href="#105">105</a>         <strong 
class="jxr_keyword">final</strong> byte[] validShadowCellQualifier2 =
+<a class="jxr_linenumber" name="106" href="#106">106</a>                 
com.google.common.primitives.Bytes.concat(qualifier2, SHADOW_CELL_SUFFIX);
+<a class="jxr_linenumber" name="107" href="#107">107</a> 
+<a class="jxr_linenumber" name="108" href="#108">108</a>         <strong 
class="jxr_keyword">final</strong> byte[] qualifier3 = Bytes.toBytes(<span 
class="jxr_string">"test-qual3"</span>);
+<a class="jxr_linenumber" name="109" href="#109">109</a> 
+<a class="jxr_linenumber" name="110" href="#110">110</a>         Cell cell1 = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier, 1, 
Bytes.toBytes(<span class="jxr_string">"value"</span>)); <em 
class="jxr_comment">// Default type is Put</em>
+<a class="jxr_linenumber" name="111" href="#111">111</a>         Cell dupCell1 
= <strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier, 1, 
Bytes.toBytes(<span class="jxr_string">"value"</span>)); <em 
class="jxr_comment">// Default type is Put</em>
+<a class="jxr_linenumber" name="112" href="#112">112</a>         Cell 
dupCell1WithAnotherValue = <strong class="jxr_keyword">new</strong> 
KeyValue(row, family, qualifier, 1, Bytes.toBytes(<span 
class="jxr_string">"other-value"</span>));
+<a class="jxr_linenumber" name="113" href="#113">113</a>         Cell delCell1 
= <strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier, 1, 
Type.Delete, Bytes.toBytes(<span class="jxr_string">"value"</span>));
+<a class="jxr_linenumber" name="114" href="#114">114</a>         Cell 
shadowCell1 = <strong class="jxr_keyword">new</strong> KeyValue(row, family, 
validShadowCellQualifier, 1, Bytes.toBytes(<span 
class="jxr_string">"sc-value"</span>));
+<a class="jxr_linenumber" name="115" href="#115">115</a> 
+<a class="jxr_linenumber" name="116" href="#116">116</a>         Cell cell2 = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier2, 1, 
Bytes.toBytes(<span class="jxr_string">"value2"</span>));
+<a class="jxr_linenumber" name="117" href="#117">117</a>         Cell 
shadowCell2 = <strong class="jxr_keyword">new</strong> KeyValue(row, family, 
validShadowCellQualifier2, 1, Bytes.toBytes(<span 
class="jxr_string">"sc-value2"</span>));
+<a class="jxr_linenumber" name="118" href="#118">118</a> 
+<a class="jxr_linenumber" name="119" href="#119">119</a>         Cell cell3 = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier3, 1, 
Bytes.toBytes(<span class="jxr_string">"value3"</span>));
+<a class="jxr_linenumber" name="120" href="#120">120</a> 
+<a class="jxr_linenumber" name="121" href="#121">121</a>         <em 
class="jxr_comment">// Check a list of cells with duplicate values</em>
+<a class="jxr_linenumber" name="122" href="#122">122</a>         
List&lt;Cell&gt; badListWithDups = <strong class="jxr_keyword">new</strong> 
ArrayList&lt;&gt;();
+<a class="jxr_linenumber" name="123" href="#123">123</a>         
badListWithDups.add(cell1);
+<a class="jxr_linenumber" name="124" href="#124">124</a>         
badListWithDups.add(dupCell1WithAnotherValue);
+<a class="jxr_linenumber" name="125" href="#125">125</a> 
+<a class="jxr_linenumber" name="126" href="#126">126</a>         <em 
class="jxr_comment">// Check dup shadow cell with same MVCC is ignored</em>
+<a class="jxr_linenumber" name="127" href="#127">127</a>         
SortedMap&lt;Cell, Optional&lt;Cell&gt;&gt; cellsToShadowCells = 
CellUtils.mapCellsToShadowCells(badListWithDups);
+<a class="jxr_linenumber" name="128" href="#128">128</a>         
assertEquals(cellsToShadowCells.size(), 1, <span class="jxr_string">"There 
should be only 1 key-value maps"</span>);
+<a class="jxr_linenumber" name="129" href="#129">129</a>         
assertTrue(cellsToShadowCells.containsKey(cell1));
+<a class="jxr_linenumber" name="130" href="#130">130</a>         KeyValue 
firstKey = (KeyValue) cellsToShadowCells.firstKey();
+<a class="jxr_linenumber" name="131" href="#131">131</a>         KeyValue 
lastKey = (KeyValue) cellsToShadowCells.lastKey();
+<a class="jxr_linenumber" name="132" href="#132">132</a>         
assertTrue(firstKey.equals(lastKey));
+<a class="jxr_linenumber" name="133" href="#133">133</a>         assertTrue(0 
== Bytes.compareTo(firstKey.getValueArray(), firstKey.getValueOffset(), 
firstKey.getValueLength(),
+<a class="jxr_linenumber" name="134" href="#134">134</a>                       
                  cell1.getValueArray(), cell1.getValueOffset(), 
cell1.getValueLength()),
+<a class="jxr_linenumber" name="135" href="#135">135</a>                    
<span class="jxr_string">"Should be equal"</span>);
+<a class="jxr_linenumber" name="136" href="#136">136</a> 
+<a class="jxr_linenumber" name="137" href="#137">137</a>         <em 
class="jxr_comment">// Modify dup shadow cell to have a greater MVCC and check 
that is replaced</em>
+<a class="jxr_linenumber" name="138" href="#138">138</a>         
HBaseShims.setKeyValueSequenceId((KeyValue) dupCell1WithAnotherValue, 1);
+<a class="jxr_linenumber" name="139" href="#139">139</a>         
cellsToShadowCells = CellUtils.mapCellsToShadowCells(badListWithDups);
+<a class="jxr_linenumber" name="140" href="#140">140</a>         
assertEquals(cellsToShadowCells.size(), 1, <span class="jxr_string">"There 
should be only 1 key-value maps"</span>);
+<a class="jxr_linenumber" name="141" href="#141">141</a>         
assertTrue(cellsToShadowCells.containsKey(dupCell1WithAnotherValue));
+<a class="jxr_linenumber" name="142" href="#142">142</a>         firstKey = 
(KeyValue) cellsToShadowCells.firstKey();
+<a class="jxr_linenumber" name="143" href="#143">143</a>         lastKey = 
(KeyValue) cellsToShadowCells.lastKey();
+<a class="jxr_linenumber" name="144" href="#144">144</a>         
assertTrue(firstKey.equals(lastKey));
+<a class="jxr_linenumber" name="145" href="#145">145</a>         assertTrue(0 
== Bytes.compareTo(firstKey.getValueArray(), firstKey.getValueOffset(),
+<a class="jxr_linenumber" name="146" href="#146">146</a>                       
                  firstKey.getValueLength(), 
dupCell1WithAnotherValue.getValueArray(),
+<a class="jxr_linenumber" name="147" href="#147">147</a>                       
                  dupCell1WithAnotherValue.getValueOffset(), 
dupCell1WithAnotherValue.getValueLength()),
+<a class="jxr_linenumber" name="148" href="#148">148</a>                    
<span class="jxr_string">"Should be equal"</span>);
+<a class="jxr_linenumber" name="149" href="#149">149</a>         <em 
class="jxr_comment">// Check a list of cells with duplicate values</em>
+<a class="jxr_linenumber" name="150" href="#150">150</a>         
List&lt;Cell&gt; cellListWithDups = <strong class="jxr_keyword">new</strong> 
ArrayList&lt;&gt;();
+<a class="jxr_linenumber" name="151" href="#151">151</a>         
cellListWithDups.add(cell1);
+<a class="jxr_linenumber" name="152" href="#152">152</a>         
cellListWithDups.add(shadowCell1);
+<a class="jxr_linenumber" name="153" href="#153">153</a>         
cellListWithDups.add(dupCell1); <em class="jxr_comment">// Dup cell</em>
+<a class="jxr_linenumber" name="154" href="#154">154</a>         
cellListWithDups.add(delCell1); <em class="jxr_comment">// Another Dup cell but 
with different type</em>
+<a class="jxr_linenumber" name="155" href="#155">155</a>         
cellListWithDups.add(cell2);
+<a class="jxr_linenumber" name="156" href="#156">156</a>         
cellListWithDups.add(cell3);
+<a class="jxr_linenumber" name="157" href="#157">157</a>         
cellListWithDups.add(shadowCell2);
+<a class="jxr_linenumber" name="158" href="#158">158</a> 
+<a class="jxr_linenumber" name="159" href="#159">159</a>         
cellsToShadowCells = CellUtils.mapCellsToShadowCells(cellListWithDups);
+<a class="jxr_linenumber" name="160" href="#160">160</a>         
assertEquals(cellsToShadowCells.size(), 3, <span class="jxr_string">"There 
should be only 3 key-value maps"</span>);
+<a class="jxr_linenumber" name="161" href="#161">161</a>         
assertTrue(cellsToShadowCells.get(cell1).get().equals(shadowCell1));
+<a class="jxr_linenumber" name="162" href="#162">162</a>         
assertTrue(cellsToShadowCells.get(dupCell1).get().equals(shadowCell1));
+<a class="jxr_linenumber" name="163" href="#163">163</a>         
assertFalse(cellsToShadowCells.containsKey(delCell1)); <em 
class="jxr_comment">// TODO This is strange and needs to be solved.</em>
+<a class="jxr_linenumber" name="164" href="#164">164</a>         <em 
class="jxr_comment">// The current algo avoids to put the delete cell</em>
+<a class="jxr_linenumber" name="165" href="#165">165</a>         <em 
class="jxr_comment">// as key after the put cell with same value was added</em>
+<a class="jxr_linenumber" name="166" href="#166">166</a>         
assertTrue(cellsToShadowCells.get(cell2).get().equals(shadowCell2));
+<a class="jxr_linenumber" name="167" href="#167">167</a>         
assertTrue(cellsToShadowCells.get(cell3).equals(Optional.absent()));
+<a class="jxr_linenumber" name="168" href="#168">168</a> 
+<a class="jxr_linenumber" name="169" href="#169">169</a>     }
+<a class="jxr_linenumber" name="170" href="#170">170</a> 
+<a class="jxr_linenumber" name="171" href="#171">171</a>     @Test(timeOut = 
10_000)
+<a class="jxr_linenumber" name="172" href="#172">172</a>     <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">void</strong> 
testShadowCellSuffixConcatenationToQualifier() {
+<a class="jxr_linenumber" name="173" href="#173">173</a> 
+<a class="jxr_linenumber" name="174" href="#174">174</a>         Cell cell = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier, 1, 
Bytes.toBytes(<span class="jxr_string">"value"</span>));
+<a class="jxr_linenumber" name="175" href="#175">175</a>         byte[] 
suffixedQualifier = CellUtils.addShadowCellSuffix(cell.getQualifierArray(),
+<a class="jxr_linenumber" name="176" href="#176">176</a>                       
                                           cell.getQualifierOffset(),
+<a class="jxr_linenumber" name="177" href="#177">177</a>                       
                                           cell.getQualifierLength());
+<a class="jxr_linenumber" name="178" href="#178">178</a>         byte[] 
expectedQualifier = com.google.common.primitives.Bytes.concat(qualifier, 
SHADOW_CELL_SUFFIX);
+<a class="jxr_linenumber" name="179" href="#179">179</a>         
assertEquals(suffixedQualifier, expectedQualifier);
+<a class="jxr_linenumber" name="180" href="#180">180</a> 
+<a class="jxr_linenumber" name="181" href="#181">181</a>     }
+<a class="jxr_linenumber" name="182" href="#182">182</a> 
+<a class="jxr_linenumber" name="183" href="#183">183</a>     
@Test(dataProvider = <span class="jxr_string">"shadow-cell-suffixes"</span>, 
timeOut = 10_000)
+<a class="jxr_linenumber" name="184" href="#184">184</a>     <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">void</strong> 
testShadowCellSuffixRemovalFromQualifier(byte[] shadowCellSuffixToTest) <strong 
class="jxr_keyword">throws</strong> IOException {
+<a class="jxr_linenumber" name="185" href="#185">185</a> 
+<a class="jxr_linenumber" name="186" href="#186">186</a>         <em 
class="jxr_comment">// Test removal from a correclty suffixed qualifier</em>
+<a class="jxr_linenumber" name="187" href="#187">187</a>         byte[] 
suffixedQualifier = com.google.common.primitives.Bytes.concat(qualifier, 
shadowCellSuffixToTest);
+<a class="jxr_linenumber" name="188" href="#188">188</a>         Cell cell = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, 
suffixedQualifier, 1, Bytes.toBytes(<span class="jxr_string">"value"</span>));
+<a class="jxr_linenumber" name="189" href="#189">189</a>         byte[] 
resultedQualifier = CellUtils.removeShadowCellSuffix(cell.getQualifierArray(),
+<a class="jxr_linenumber" name="190" href="#190">190</a>                       
                                              cell.getQualifierOffset(),
+<a class="jxr_linenumber" name="191" href="#191">191</a>                       
                                              cell.getQualifierLength());
+<a class="jxr_linenumber" name="192" href="#192">192</a>         byte[] 
expectedQualifier = qualifier;
+<a class="jxr_linenumber" name="193" href="#193">193</a>         
assertEquals(resultedQualifier, expectedQualifier);
+<a class="jxr_linenumber" name="194" href="#194">194</a> 
+<a class="jxr_linenumber" name="195" href="#195">195</a>         <em 
class="jxr_comment">// Test removal from a badly suffixed qualifier</em>
+<a class="jxr_linenumber" name="196" href="#196">196</a>         byte[] 
badlySuffixedQualifier = com.google.common.primitives.Bytes.concat(qualifier, 
Bytes.toBytes(<span class="jxr_string">"BAD"</span>));
+<a class="jxr_linenumber" name="197" href="#197">197</a>         Cell badCell 
= <strong class="jxr_keyword">new</strong> KeyValue(row, family, 
badlySuffixedQualifier, 1, Bytes.toBytes(<span 
class="jxr_string">"value"</span>));
+<a class="jxr_linenumber" name="198" href="#198">198</a>         <strong 
class="jxr_keyword">try</strong> {
+<a class="jxr_linenumber" name="199" href="#199">199</a>             
CellUtils.removeShadowCellSuffix(badCell.getQualifierArray(),
+<a class="jxr_linenumber" name="200" href="#200">200</a>                       
                       badCell.getQualifierOffset(),
+<a class="jxr_linenumber" name="201" href="#201">201</a>                       
                       badCell.getQualifierLength());
+<a class="jxr_linenumber" name="202" href="#202">202</a>             fail();
+<a class="jxr_linenumber" name="203" href="#203">203</a>         } <strong 
class="jxr_keyword">catch</strong> (IllegalArgumentException e) {
+<a class="jxr_linenumber" name="204" href="#204">204</a>             <em 
class="jxr_comment">// Expected</em>
+<a class="jxr_linenumber" name="205" href="#205">205</a>         }
+<a class="jxr_linenumber" name="206" href="#206">206</a>     }
+<a class="jxr_linenumber" name="207" href="#207">207</a> 
+<a class="jxr_linenumber" name="208" href="#208">208</a>     @Test(timeOut = 
10_000)
+<a class="jxr_linenumber" name="209" href="#209">209</a>     <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">void</strong> 
testMatchingQualifiers() {
+<a class="jxr_linenumber" name="210" href="#210">210</a>         Cell cell = 
<strong class="jxr_keyword">new</strong> KeyValue(row, family, qualifier, 1, 
Bytes.toBytes(<span class="jxr_string">"value"</span>));
+<a class="jxr_linenumber" name="211" href="#211">211</a>         
assertTrue(CellUtils.matchingQualifier(cell, qualifier, 0, qualifier.length));
+<a class="jxr_linenumber" name="212" href="#212">212</a>         
assertFalse(CellUtils.matchingQualifier(cell, otherQualifier, 0, 
otherQualifier.length));
+<a class="jxr_linenumber" name="213" href="#213">213</a>     }
+<a class="jxr_linenumber" name="214" href="#214">214</a> 
+<a class="jxr_linenumber" name="215" href="#215">215</a>     
@Test(dataProvider = <span class="jxr_string">"shadow-cell-suffixes"</span>, 
timeOut = 10_000)
+<a class="jxr_linenumber" name="216" href="#216">216</a>     <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">void</strong> 
testQualifierLengthFromShadowCellQualifier(byte[] shadowCellSuffixToTest) {
+<a class="jxr_linenumber" name="217" href="#217">217</a>         <em 
class="jxr_comment">// Test suffixed qualifier</em>
+<a class="jxr_linenumber" name="218" href="#218">218</a>         byte[] 
suffixedQualifier = com.google.common.primitives.Bytes.concat(qualifier, 
shadowCellSuffixToTest);
+<a class="jxr_linenumber" name="219" href="#219">219</a>         <strong 
class="jxr_keyword">int</strong> originalQualifierLength =
+<a class="jxr_linenumber" name="220" href="#220">220</a>                 
CellUtils.qualifierLengthFromShadowCellQualifier(suffixedQualifier, 0, 
suffixedQualifier.length);
+<a class="jxr_linenumber" name="221" href="#221">221</a>         
assertEquals(originalQualifierLength, qualifier.length);
+<a class="jxr_linenumber" name="222" href="#222">222</a> 
+<a class="jxr_linenumber" name="223" href="#223">223</a>         <em 
class="jxr_comment">// Test passing qualifier without shadow cell suffix</em>
+<a class="jxr_linenumber" name="224" href="#224">224</a>         
originalQualifierLength =
+<a class="jxr_linenumber" name="225" href="#225">225</a>                 
CellUtils.qualifierLengthFromShadowCellQualifier(qualifier, 0, 
qualifier.length);
+<a class="jxr_linenumber" name="226" href="#226">226</a>         
assertEquals(originalQualifierLength, qualifier.length);
+<a class="jxr_linenumber" name="227" href="#227">227</a>     }
+<a class="jxr_linenumber" name="228" href="#228">228</a> 
+<a class="jxr_linenumber" name="229" href="#229">229</a> }
 </pre>
 <hr/><div id="footer">This page was automatically generated by <a 
href="http://maven.apache.org/";>Maven</a></div></body>
 </html>

http://git-wip-us.apache.org/repos/asf/incubator-omid-site/blob/3a40a657/xref-test/org/apache/omid/transaction/TestColumnIterator.html
----------------------------------------------------------------------
diff --git a/xref-test/org/apache/omid/transaction/TestColumnIterator.html 
b/xref-test/org/apache/omid/transaction/TestColumnIterator.html
index de5eed1..0c4c67a 100644
--- a/xref-test/org/apache/omid/transaction/TestColumnIterator.html
+++ b/xref-test/org/apache/omid/transaction/TestColumnIterator.html
@@ -8,23 +8,23 @@
 <body>
 <div id="overview"><a 
href="../../../../../../target/site/testapidocs/org/apache/omid/transaction/TestColumnIterator.html">View
 Javadoc</a></div><pre>
 
-<a class="jxr_linenumber" name="1" href="#1">1</a>   <em 
class="jxr_javadoccomment">/**</em>
-<a class="jxr_linenumber" name="2" href="#2">2</a>   <em 
class="jxr_javadoccomment"> * Licensed to the Apache Software Foundation (ASF) 
under one</em>
-<a class="jxr_linenumber" name="3" href="#3">3</a>   <em 
class="jxr_javadoccomment"> * or more contributor license agreements.  See the 
NOTICE file</em>
-<a class="jxr_linenumber" name="4" href="#4">4</a>   <em 
class="jxr_javadoccomment"> * distributed with this work for additional 
information</em>
-<a class="jxr_linenumber" name="5" href="#5">5</a>   <em 
class="jxr_javadoccomment"> * regarding copyright ownership.  The ASF licenses 
this file</em>
-<a class="jxr_linenumber" name="6" href="#6">6</a>   <em 
class="jxr_javadoccomment"> * to you under the Apache License, Version 2.0 
(the</em>
-<a class="jxr_linenumber" name="7" href="#7">7</a>   <em 
class="jxr_javadoccomment"> * "License"); you may not use this file except in 
compliance</em>
-<a class="jxr_linenumber" name="8" href="#8">8</a>   <em 
class="jxr_javadoccomment"> * with the License.  You may obtain a copy of the 
License at</em>
-<a class="jxr_linenumber" name="9" href="#9">9</a>   <em 
class="jxr_javadoccomment"> *</em>
-<a class="jxr_linenumber" name="10" href="#10">10</a>  <em 
class="jxr_javadoccomment"> *   <a 
href="http://www.apache.org/licenses/LICENSE-2.0"; 
target="alexandria_uri">http://www.apache.org/licenses/LICENSE-2.0</a></em>
-<a class="jxr_linenumber" name="11" href="#11">11</a>  <em 
class="jxr_javadoccomment"> *</em>
-<a class="jxr_linenumber" name="12" href="#12">12</a>  <em 
class="jxr_javadoccomment"> * Unless required by applicable law or agreed to in 
writing, software</em>
-<a class="jxr_linenumber" name="13" href="#13">13</a>  <em 
class="jxr_javadoccomment"> * distributed under the License is distributed on 
an "AS IS" BASIS,</em>
-<a class="jxr_linenumber" name="14" href="#14">14</a>  <em 
class="jxr_javadoccomment"> * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, 
either express or implied.</em>
-<a class="jxr_linenumber" name="15" href="#15">15</a>  <em 
class="jxr_javadoccomment"> * See the License for the specific language 
governing permissions and</em>
-<a class="jxr_linenumber" name="16" href="#16">16</a>  <em 
class="jxr_javadoccomment"> * limitations under the License.</em>
-<a class="jxr_linenumber" name="17" href="#17">17</a>  <em 
class="jxr_javadoccomment"> */</em>
+<a class="jxr_linenumber" name="1" href="#1">1</a>   <em 
class="jxr_comment">/*</em>
+<a class="jxr_linenumber" name="2" href="#2">2</a>   <em class="jxr_comment"> 
* Licensed to the Apache Software Foundation (ASF) under one</em>
+<a class="jxr_linenumber" name="3" href="#3">3</a>   <em class="jxr_comment"> 
* or more contributor license agreements.  See the NOTICE file</em>
+<a class="jxr_linenumber" name="4" href="#4">4</a>   <em class="jxr_comment"> 
* distributed with this work for additional information</em>
+<a class="jxr_linenumber" name="5" href="#5">5</a>   <em class="jxr_comment"> 
* regarding copyright ownership.  The ASF licenses this file</em>
+<a class="jxr_linenumber" name="6" href="#6">6</a>   <em class="jxr_comment"> 
* to you under the Apache License, Version 2.0 (the</em>
+<a class="jxr_linenumber" name="7" href="#7">7</a>   <em class="jxr_comment"> 
* "License"); you may not use this file except in compliance</em>
+<a class="jxr_linenumber" name="8" href="#8">8</a>   <em class="jxr_comment"> 
* with the License.  You may obtain a copy of the License at</em>
+<a class="jxr_linenumber" name="9" href="#9">9</a>   <em class="jxr_comment"> 
*</em>
+<a class="jxr_linenumber" name="10" href="#10">10</a>  <em 
class="jxr_comment"> *   <a href="http://www.apache.org/licenses/LICENSE-2.0"; 
target="alexandria_uri">http://www.apache.org/licenses/LICENSE-2.0</a></em>
+<a class="jxr_linenumber" name="11" href="#11">11</a>  <em 
class="jxr_comment"> *</em>
+<a class="jxr_linenumber" name="12" href="#12">12</a>  <em 
class="jxr_comment"> * Unless required by applicable law or agreed to in 
writing, software</em>
+<a class="jxr_linenumber" name="13" href="#13">13</a>  <em 
class="jxr_comment"> * distributed under the License is distributed on an "AS 
IS" BASIS,</em>
+<a class="jxr_linenumber" name="14" href="#14">14</a>  <em 
class="jxr_comment"> * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either 
express or implied.</em>
+<a class="jxr_linenumber" name="15" href="#15">15</a>  <em 
class="jxr_comment"> * See the License for the specific language governing 
permissions and</em>
+<a class="jxr_linenumber" name="16" href="#16">16</a>  <em 
class="jxr_comment"> * limitations under the License.</em>
+<a class="jxr_linenumber" name="17" href="#17">17</a>  <em 
class="jxr_comment"> */</em>
 <a class="jxr_linenumber" name="18" href="#18">18</a>  <strong 
class="jxr_keyword">package</strong> org.apache.omid.transaction;
 <a class="jxr_linenumber" name="19" href="#19">19</a>  
 <a class="jxr_linenumber" name="20" href="#20">20</a>  <strong 
class="jxr_keyword">import</strong> com.google.common.collect.ImmutableList;
@@ -40,7 +40,7 @@
 <a class="jxr_linenumber" name="30" href="#30">30</a>  <strong 
class="jxr_keyword">import</strong> java.util.Collection;
 <a class="jxr_linenumber" name="31" href="#31">31</a>  <strong 
class="jxr_keyword">import</strong> java.util.List;
 <a class="jxr_linenumber" name="32" href="#32">32</a>  
-<a class="jxr_linenumber" name="33" href="#33">33</a>  <strong 
class="jxr_keyword">import</strong> <strong class="jxr_keyword">static</strong> 
org.testng.AssertJUnit.assertEquals;
+<a class="jxr_linenumber" name="33" href="#33">33</a>  <strong 
class="jxr_keyword">import</strong> <strong class="jxr_keyword">static</strong> 
org.testng.Assert.assertEquals;
 <a class="jxr_linenumber" name="34" href="#34">34</a>  
 <a class="jxr_linenumber" name="35" href="#35">35</a>  @Test(groups = <span 
class="jxr_string">"noHBase"</span>)
 <a class="jxr_linenumber" name="36" href="#36">36</a>  <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">class</strong> 
<a 
href="../../../../org/apache/omid/transaction/TestColumnIterator.html">TestColumnIterator</a>
 {
@@ -67,13 +67,13 @@
 <a class="jxr_linenumber" name="57" href="#57">57</a>              )
 <a class="jxr_linenumber" name="58" href="#58">58</a>      );
 <a class="jxr_linenumber" name="59" href="#59">59</a>  
-<a class="jxr_linenumber" name="60" href="#60">60</a>      @Test
+<a class="jxr_linenumber" name="60" href="#60">60</a>      @Test(timeOut = 
10_000)
 <a class="jxr_linenumber" name="61" href="#61">61</a>      <strong 
class="jxr_keyword">public</strong> <strong class="jxr_keyword">void</strong> 
testGroupingCellsByColumnFilteringShadowCells() {
 <a class="jxr_linenumber" name="62" href="#62">62</a>  
 <a class="jxr_linenumber" name="63" href="#63">63</a>          
ImmutableList&lt;Collection&lt;Cell&gt;&gt; groupedColumnsWithoutShadowCells =
 <a class="jxr_linenumber" name="64" href="#64">64</a>                  
TTable.groupCellsByColumnFilteringShadowCells(cells);
 <a class="jxr_linenumber" name="65" href="#65">65</a>          Log.info(<span 
class="jxr_string">"Column Groups "</span> + groupedColumnsWithoutShadowCells);
-<a class="jxr_linenumber" name="66" href="#66">66</a>          
assertEquals(<span class="jxr_string">"Should be 3 column groups"</span>, 3, 
groupedColumnsWithoutShadowCells.size());
+<a class="jxr_linenumber" name="66" href="#66">66</a>          
assertEquals(groupedColumnsWithoutShadowCells.size(), 3, <span 
class="jxr_string">"Should be 3 column groups"</span>);
 <a class="jxr_linenumber" name="67" href="#67">67</a>          <strong 
class="jxr_keyword">int</strong> group1Counter = 0;
 <a class="jxr_linenumber" name="68" href="#68">68</a>          <strong 
class="jxr_keyword">int</strong> group2Counter = 0;
 <a class="jxr_linenumber" name="69" href="#69">69</a>          <strong 
class="jxr_keyword">int</strong> group3Counter = 0;
@@ -99,9 +99,9 @@
 <a class="jxr_linenumber" name="89" href="#89">89</a>              }
 <a class="jxr_linenumber" name="90" href="#90">90</a>          }
 <a class="jxr_linenumber" name="91" href="#91">91</a>  
-<a class="jxr_linenumber" name="92" href="#92">92</a>          
assertEquals(<span class="jxr_string">"Group 1 should have 2 elems"</span>, 2, 
group1Counter);
-<a class="jxr_linenumber" name="93" href="#93">93</a>          
assertEquals(<span class="jxr_string">"Group 2 should have 1 elems"</span>, 1, 
group2Counter);
-<a class="jxr_linenumber" name="94" href="#94">94</a>          
assertEquals(<span class="jxr_string">"Group 3 should have 1 elems"</span>, 1, 
group3Counter);
+<a class="jxr_linenumber" name="92" href="#92">92</a>          
assertEquals(group1Counter, 2, <span class="jxr_string">"Group 1 should have 2 
elems"</span>);
+<a class="jxr_linenumber" name="93" href="#93">93</a>          
assertEquals(group2Counter, 1, <span class="jxr_string">"Group 2 should have 1 
elems"</span>);
+<a class="jxr_linenumber" name="94" href="#94">94</a>          
assertEquals(group3Counter, 1, <span class="jxr_string">"Group 3 should have 1 
elems"</span>);
 <a class="jxr_linenumber" name="95" href="#95">95</a>      }
 <a class="jxr_linenumber" name="96" href="#96">96</a>  }
 </pre>

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