This is an automated email from the ASF dual-hosted git repository. rkk pushed a commit to branch SDAP-522 in repository https://gitbox.apache.org/repos/asf/sdap-nexus.git
commit a5f8b31a948b2a6905556508fff8981c2ba31dc7 Author: rileykk <[email protected]> AuthorDate: Fri Jul 5 13:20:50 2024 -0700 Implemented fixes --- analysis/webservice/algorithms/Heartbeat.py | 10 +- analysis/webservice/algorithms/doms/StacCatalog.py | 2 +- .../nexus_tornado/app_builders/NexusAppBuilder.py | 2 +- data-access/nexustiles/AbstractTileService.py | 3 + .../nexustiles/backends/nexusproto/backend.py | 8 + data-access/nexustiles/backends/zarr/backend.py | 5 + data-access/nexustiles/nexustiles.py | 16 ++ poetry.lock | 229 ++++++++++++--------- pyproject.toml | 1 + 9 files changed, 165 insertions(+), 111 deletions(-) diff --git a/analysis/webservice/algorithms/Heartbeat.py b/analysis/webservice/algorithms/Heartbeat.py index bc1f50f..2cdfb26 100644 --- a/analysis/webservice/algorithms/Heartbeat.py +++ b/analysis/webservice/algorithms/Heartbeat.py @@ -29,15 +29,7 @@ class HeartbeatCalcHandlerImpl(NexusCalcHandler): singleton = True def calc(self, computeOptions, **args): - solrOnline = self._get_tile_service().pingSolr() - - # Not sure how to best check cassandra cluster status so just return True for now - cassOnline = True - - if solrOnline and cassOnline: - status = {"online": True} - else: - status = {"online": False} + status = self._get_tile_service().heartbeat() class SimpleResult(object): def __init__(self, result): diff --git a/analysis/webservice/algorithms/doms/StacCatalog.py b/analysis/webservice/algorithms/doms/StacCatalog.py index 2c1aa12..e1b9499 100644 --- a/analysis/webservice/algorithms/doms/StacCatalog.py +++ b/analysis/webservice/algorithms/doms/StacCatalog.py @@ -81,7 +81,7 @@ class StacCatalog(BaseDomsHandler.BaseDomsQueryCalcHandler): ] url = f'https://{self.host}/cdmsresults?id={execution_id}&output={output_format}' - for page_num in range(1, num_primary_matched, page_size): + for page_num, _ in enumerate(range(1, num_primary_matched, page_size), start=1): links.append({ 'rel': 'data', 'href': f'{url}&pageNum={page_num}&pageSize={page_size}' diff --git a/analysis/webservice/nexus_tornado/app_builders/NexusAppBuilder.py b/analysis/webservice/nexus_tornado/app_builders/NexusAppBuilder.py index 0179858..744fdca 100644 --- a/analysis/webservice/nexus_tornado/app_builders/NexusAppBuilder.py +++ b/analysis/webservice/nexus_tornado/app_builders/NexusAppBuilder.py @@ -31,7 +31,7 @@ class NexusAppBuilder: class VersionHandler(tornado.web.RequestHandler): def get(self): - self.write(pkg_resources.get_distribution("nexusanalysis").version) + self.write(pkg_resources.get_distribution("sdap-nexus").version) self.handlers.append((r"/version", VersionHandler)) diff --git a/data-access/nexustiles/AbstractTileService.py b/data-access/nexustiles/AbstractTileService.py index 1e04f69..1d9891e 100644 --- a/data-access/nexustiles/AbstractTileService.py +++ b/data-access/nexustiles/AbstractTileService.py @@ -24,6 +24,9 @@ class AbstractTileService(ABC): def __init__(self, dataset_name): self._name = dataset_name + def heartbeat(self) -> bool: + return True + @abstractmethod def get_dataseries_list(self, simple=False): raise NotImplementedError() diff --git a/data-access/nexustiles/backends/nexusproto/backend.py b/data-access/nexustiles/backends/nexusproto/backend.py index 2c99dad..0c44a89 100644 --- a/data-access/nexustiles/backends/nexusproto/backend.py +++ b/data-access/nexustiles/backends/nexusproto/backend.py @@ -549,6 +549,14 @@ class NexusprotoTileService(AbstractTileService): return tiles + def heartbeat(self) -> bool: + solrOnline = self.pingSolr() + + # Not sure how to best check cassandra cluster status so just return True for now + cassOnline = True + + return solrOnline and cassOnline + def pingSolr(self): status = self._metadatastore.ping() if status and status["status"] == "OK": diff --git a/data-access/nexustiles/backends/zarr/backend.py b/data-access/nexustiles/backends/zarr/backend.py index c4df96b..2cf91e5 100644 --- a/data-access/nexustiles/backends/zarr/backend.py +++ b/data-access/nexustiles/backends/zarr/backend.py @@ -110,6 +110,11 @@ class ZarrBackend(AbstractTileService): logger.warning(f'Latitude coordinate for {self._name} is in descending order. Flipping it to ascending') self.__ds = self.__ds.isel({self.__latitude: slice(None, None, -1)}) + def heartbeat(self) -> bool: + # TODO: This is temporary, eventually we should use the logic to be introduced for SDAP-517 (PR#312) to evaluate + # if data is accessible currently. + return True + def get_dataseries_list(self, simple=False): ds = { "shortName": self._name, diff --git a/data-access/nexustiles/nexustiles.py b/data-access/nexustiles/nexustiles.py index 3ce3c28..d6dcae6 100644 --- a/data-access/nexustiles/nexustiles.py +++ b/data-access/nexustiles/nexustiles.py @@ -385,6 +385,22 @@ class NexusTileService: return datasets + def heartbeat(self) -> Dict[str, bool]: + heartbeats = {'nexusproto': NexusTileService.backends[None]['backend'].heartbeat()} + + for backend_name in NexusTileService.backends: + if backend_name in [None, '__nexusproto__']: + continue + + backend = NexusTileService.backends[backend_name]['backend'] + + if backend == NexusTileService.backends[None]['backend']: + continue + + heartbeats[backend_name] = backend.heartbeat() + + return heartbeats + @tile_data() @catch_not_implemented diff --git a/poetry.lock b/poetry.lock index be0e9a4..690e672 100644 --- a/poetry.lock +++ b/poetry.lock @@ -299,13 +299,13 @@ graph = ["gremlinpython (==3.4.6)"] [[package]] name = "certifi" -version = "2024.6.2" +version = "2024.7.4" description = "Python package for providing Mozilla's CA Bundle." optional = false python-versions = ">=3.6" files = [ - {file = "certifi-2024.6.2-py3-none-any.whl", hash = "sha256:ddc6c8ce995e6987e7faf5e3f1b02b302836a0e5d98ece18392cb1a36c72ad56"}, - {file = "certifi-2024.6.2.tar.gz", hash = "sha256:3cd43f1c6fa7dedc5899d69d3ad0398fd018ad1a17fba83ddaf78aa46c747516"}, + {file = "certifi-2024.7.4-py3-none-any.whl", hash = "sha256:c198e21b1289c2ab85ee4e67bb4b4ef3ead0892059901a8d5b622f24a1101e90"}, + {file = "certifi-2024.7.4.tar.gz", hash = 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