SINGA-284 - Add python unittest into Jenkins and link static libs into whl file

update python unittest to genreate xml report;
update dockerfile to install unittest-xml-reporting;
update jenkins script to run python unittest;

add USE_MODULES for compiling protobuf and blas

skip cuda test if pysinga is not compiled with cuda


Project: http://git-wip-us.apache.org/repos/asf/incubator-singa/repo
Commit: http://git-wip-us.apache.org/repos/asf/incubator-singa/commit/e44658aa
Tree: http://git-wip-us.apache.org/repos/asf/incubator-singa/tree/e44658aa
Diff: http://git-wip-us.apache.org/repos/asf/incubator-singa/diff/e44658aa

Branch: refs/heads/master
Commit: e44658aa763f9aef9a38c3ea57855e71dd798ef8
Parents: 3f23c0d
Author: wangwei <[email protected]>
Authored: Thu Dec 15 17:56:23 2016 +0800
Committer: wangwei <[email protected]>
Committed: Sat Dec 24 09:33:27 2016 +0800

----------------------------------------------------------------------
 python/setup.py.in                         |  9 +++++----
 test/python/run.py                         |  9 +++++++--
 test/python/test_optimizer.py              |  9 ++++++---
 tool/jenkins/README.md                     |  2 +-
 tool/jenkins/docker/ubuntu14.04/Dockerfile |  3 +--
 tool/jenkins/docker/ubuntu16.04/Dockerfile |  5 ++---
 tool/jenkins/jenkins_wheel.sh              | 13 ++++++++-----
 7 files changed, 30 insertions(+), 20 deletions(-)
----------------------------------------------------------------------


http://git-wip-us.apache.org/repos/asf/incubator-singa/blob/e44658aa/python/setup.py.in
----------------------------------------------------------------------
diff --git a/python/setup.py.in b/python/setup.py.in
index 95550d8..503ac8a 100644
--- a/python/setup.py.in
+++ b/python/setup.py.in
@@ -6,15 +6,15 @@
 # to you under the Apache License, Version 2.0 (the
 # "License"); you may not use this file except in compliance
 # with the License.  You may obtain a copy of the License at
-# 
+#
 #     http://www.apache.org/licenses/LICENSE-2.0
-# 
+#
 # Unless required by applicable law or agreed to in writing, software
 # distributed under the License is distributed on an "AS IS" BASIS,
 # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 # See the License for the specific language governing permissions and
 # limitations under the License.
-# 
+#
 
 # Always prefer setuptools over distutils
 from setuptools import setup
@@ -60,7 +60,8 @@ setup(
 
     install_requires=[
         'numpy>=1.11.0',
-        'protobuf>=2.5.0,<3'
+        'protobuf>=2.5.0,<3',
+        'unittest-xml-reporting'
         ],
 
     #List additional groups of dependencies here (e.g. development

http://git-wip-us.apache.org/repos/asf/incubator-singa/blob/e44658aa/test/python/run.py
----------------------------------------------------------------------
diff --git a/test/python/run.py b/test/python/run.py
index ae33fbd..8f7a45f 100644
--- a/test/python/run.py
+++ b/test/python/run.py
@@ -17,8 +17,13 @@
 #
 
 import unittest
+import xmlrunner
 
 loader = unittest.TestLoader()
 tests = loader.discover('.')
-testRunner = unittest.runner.TextTestRunner()
-testRunner.run(tests)
+# testRunner = unittest.runner.TextTestRunner()
+with open('unittest.xml', 'wb') as output:
+    testRunner = xmlrunner.XMLTestRunner(output=output,
+                                         failfast=False,
+                                         buffer=False)
+    testRunner.run(tests)

http://git-wip-us.apache.org/repos/asf/incubator-singa/blob/e44658aa/test/python/test_optimizer.py
----------------------------------------------------------------------
diff --git a/test/python/test_optimizer.py b/test/python/test_optimizer.py
index bb3613d..601aada 100644
--- a/test/python/test_optimizer.py
+++ b/test/python/test_optimizer.py
@@ -15,8 +15,6 @@
 # specific language governing permissions and limitations
 # under the License.
 # =============================================================================
-import sys
-import os
 import unittest
 import numpy as np
 
@@ -24,8 +22,10 @@ import numpy as np
 import singa.tensor as tensor
 import singa.optimizer as opt
 import singa.device as device
+from singa import singa_wrap
 
-cuda = device.create_cuda_gpu()
+if singa_wrap.USE_CUDA:
+    cuda = device.create_cuda_gpu()
 
 
 class TestOptimizer(unittest.TestCase):
@@ -48,6 +48,7 @@ class TestOptimizer(unittest.TestCase):
         for i in range(self.W.size()):
             self.assertAlmostEqual(w[i], self.np_W[i] - lr * self.np_g[i])
 
+    @unittest.skipIf(not singa_wrap.USE_CUDA, 'CUDA is not enabled')
     def test_sgd_cuda(self):
         lr = 0.1
         sgd = opt.SGD(lr)
@@ -67,6 +68,7 @@ class TestOptimizer(unittest.TestCase):
         for i in range(g.size):
             self.assertAlmostEqual(g[i], self.np_g[i] * threshold / nrm)
 
+    @unittest.skipIf(not singa_wrap.USE_CUDA, 'CUDA is not enabled')
     def test_constraint_cuda(self):
         threshold = 0.02
         self.to_cuda()
@@ -87,6 +89,7 @@ class TestOptimizer(unittest.TestCase):
             self.assertAlmostEqual(g[i],
                                    self.np_g[i] + coefficient * self.np_W[i])
 
+    @unittest.skipIf(not singa_wrap.USE_CUDA, 'CUDA is not enabled')
     def test_regularizer_cuda(self):
         coefficient = 0.0001
         reg = opt.L2Regularizer(coefficient)

http://git-wip-us.apache.org/repos/asf/incubator-singa/blob/e44658aa/tool/jenkins/README.md
----------------------------------------------------------------------
diff --git a/tool/jenkins/README.md b/tool/jenkins/README.md
index 6bd90df..d20470b 100644
--- a/tool/jenkins/README.md
+++ b/tool/jenkins/README.md
@@ -38,7 +38,7 @@ Create a multi-configuration project and configure project as 
follows:
 
 ### Post-build Actions
   * Archive the artifacts - ``build/python/dist/**.whl``
-  * Publish JUnit test result report - Test report XMLs - ``**/gtest.xml``
+  * Publish JUnit test result report - Test report XMLs - ``**/gtest.xml, 
**/unittest.xml``
 
 ## Docker Images
 We provide in `docker` a number of singa docker images for Jenkins to use as

http://git-wip-us.apache.org/repos/asf/incubator-singa/blob/e44658aa/tool/jenkins/docker/ubuntu14.04/Dockerfile
----------------------------------------------------------------------
diff --git a/tool/jenkins/docker/ubuntu14.04/Dockerfile 
b/tool/jenkins/docker/ubuntu14.04/Dockerfile
index b664689..9b974d2 100644
--- a/tool/jenkins/docker/ubuntu14.04/Dockerfile
+++ b/tool/jenkins/docker/ubuntu14.04/Dockerfile
@@ -9,9 +9,8 @@ FROM nvidia/cuda:8.0-cudnn5-devel
 # install dependencies
 RUN apt-get update && apt-get install -y \
     git vim wget build-essential autoconf libtool cmake \
-    libprotobuf-dev libopenblas-dev protobuf-compiler \
     libpcre3-dev python-dev python-pip && \
-    pip install numpy
+    pip install numpy protobuf unittest-xml-reporting
 
 # install swig 3.0
 RUN wget http://prdownloads.sourceforge.net/swig/swig-3.0.10.tar.gz && \

http://git-wip-us.apache.org/repos/asf/incubator-singa/blob/e44658aa/tool/jenkins/docker/ubuntu16.04/Dockerfile
----------------------------------------------------------------------
diff --git a/tool/jenkins/docker/ubuntu16.04/Dockerfile 
b/tool/jenkins/docker/ubuntu16.04/Dockerfile
index e7835f4..612dd8b 100644
--- a/tool/jenkins/docker/ubuntu16.04/Dockerfile
+++ b/tool/jenkins/docker/ubuntu16.04/Dockerfile
@@ -5,10 +5,9 @@ FROM nvidia/cuda:8.0-cudnn5-devel-ubuntu16.04
 
 # install dependencies
 RUN apt-get update && apt-get install -y \
-    git vim wget build-essential autoconf libtool cmake \
-    libprotobuf-dev libopenblas-dev protobuf-compiler \
+    git wget build-essential autoconf libtool cmake \
     libpcre3-dev python-dev python-pip swig && \
-    pip install numpy
+    pip install numpy protobuf unittest-xml-reporting
 
 # set environment
 ENV CPLUS_INCLUDE_PATH 
/usr/local/lib/python2.7/dist-packages/numpy/core/include:${CPLUS_INCLUDE_PATH}

http://git-wip-us.apache.org/repos/asf/incubator-singa/blob/e44658aa/tool/jenkins/jenkins_wheel.sh
----------------------------------------------------------------------
diff --git a/tool/jenkins/jenkins_wheel.sh b/tool/jenkins/jenkins_wheel.sh
index f82d070..c3d075f 100644
--- a/tool/jenkins/jenkins_wheel.sh
+++ b/tool/jenkins/jenkins_wheel.sh
@@ -1,4 +1,4 @@
-#!/usr/bin/env bash 
+#!/usr/bin/env bash
 #/**
 # *
 # * Licensed to the Apache Software Foundation (ASF) under one
@@ -26,7 +26,7 @@ echo workspace: `pwd`
 echo OS version: `cat /etc/issue`
 echo kernal version: `uname -a`
 echo CUDA version: $CUDA_VERSION
-echo CUDNN version: $CUDNN_VERSION 
+echo CUDNN version: $CUDNN_VERSION
 # set parameters
 CUDNN="OFF"
 if [ $1 = "CUDNN" ]; then
@@ -37,14 +37,17 @@ rm -rf build
 mkdir build
 # compile singa c++
 cd build
-cmake -DUSE_CUDNN=$CUDNN -DUSE_CUDA=$CUDNN ../ 
+cmake -DUSE_CUDNN=$CUDNN -DUSE_CUDA=$CUDNN -DUSE_MODULES=ON ../
 make
-# unit test
-./bin/test_singa --gtest_output=xml:./../gtest.xml
+# unit test cpp code
+./bin/test_singa --gtest_output=xml:./gtest.xml
 # compile pysinga
 cd python
 python setup.py bdist_wheel
 # rename dist
 cd dist
 mv singa-1.0.1-py2-none-any.whl singa-1.0.0-cp27-none-linux_x86_64.whl
+# unit test python code
+cd ../../../test/python
+PYTHONPATH=../../build/python/ python run.py
 echo Job finished...

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