Depend on Tika for media type detection Unit tests are added for a couple of common formats. See src/test/resources/README.txt for details, these are all created by me, but on purpose don't have the ASF license header.
Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/repo Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/commit/646e24ca Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/tree/646e24ca Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/diff/646e24ca Branch: refs/heads/master Commit: 646e24ca8f69db399113c6b751e8aaf2f0948cf2 Parents: d3efff9 Author: Stian Soiland-Reyes <[email protected]> Authored: Fri Aug 19 12:30:32 2016 +0100 Committer: Stian Soiland-Reyes <[email protected]> Committed: Fri Oct 21 09:17:18 2016 +0200 ---------------------------------------------------------------------- .../taverna/renderers/MediaTypeDetector.java | 50 ++++-- taverna-renderers-impl/pom.xml | 6 + .../renderers/impl/MediaTypeDetectorImpl.java | 63 +++++++- .../renderers/TestMediaTypeDetector.java | 159 +++++++++++++++++++ .../src/test/resources/README.txt | 21 +++ .../src/test/resources/test.csv | 3 + .../src/test/resources/test.docx | Bin 0 -> 4069 bytes .../src/test/resources/test.html | 9 ++ .../src/test/resources/test.jpeg | Bin 0 -> 3646 bytes .../src/test/resources/test.ods | Bin 0 -> 7597 bytes .../src/test/resources/test.odt | Bin 0 -> 8291 bytes .../src/test/resources/test.pdf | Bin 0 -> 9752 bytes .../src/test/resources/test.png | Bin 0 -> 2310 bytes .../src/test/resources/test.svg | 117 ++++++++++++++ .../src/test/resources/test.txt | 3 + .../src/test/resources/test.xlsx | Bin 0 -> 4826 bytes .../src/test/resources/test.xml | 4 + .../src/test/resources/test.zip | Bin 0 -> 1287 bytes 18 files changed, 417 insertions(+), 18 deletions(-) ---------------------------------------------------------------------- http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-api/src/main/java/org/apache/taverna/renderers/MediaTypeDetector.java ---------------------------------------------------------------------- diff --git a/taverna-renderers-api/src/main/java/org/apache/taverna/renderers/MediaTypeDetector.java b/taverna-renderers-api/src/main/java/org/apache/taverna/renderers/MediaTypeDetector.java index 585d351..db3c100 100644 --- a/taverna-renderers-api/src/main/java/org/apache/taverna/renderers/MediaTypeDetector.java +++ b/taverna-renderers-api/src/main/java/org/apache/taverna/renderers/MediaTypeDetector.java @@ -21,6 +21,7 @@ package org.apache.taverna.renderers; import java.io.IOException; import java.net.URI; import java.nio.file.Path; +import java.util.Collections; import java.util.List; public interface MediaTypeDetector { @@ -44,7 +45,7 @@ public interface MediaTypeDetector { public List<String> guessMediaTypes(Path path) throws IOException ; /** - * Guess the media types of a given {@link String}. + * Guess the media types of a given {@link String} value. * <p> * The media types in the list are ordered by decreasing likelihood, e.g. * the first item in the list is the most likely (in many cases most @@ -53,15 +54,15 @@ public interface MediaTypeDetector { * The returned list will never be empty, as it will always contain either * <code>text/plain</code>. * - * @param path - * A {@link Path} to be guessed. The file extension of the path - * MAY be taken into consideration. + * @param String + * A string to check, e.g. an XML document. Note that only the first + * few lines of the string to test is required. * @return A list of guessed media types */ public List<String> guessMediaTypes(String string); /** - * Guess the media types of a given {@link Path}. + * Guess the media types of a given byte array. * <p> * The media types in the list are ordered by decreasing likelihood, e.g. * the first item in the list is the most likely (in many cases most @@ -70,9 +71,9 @@ public interface MediaTypeDetector { * The returned list will never be empty, as it will always contain * <code>application/octet-stream</code> * - * @param path - * A {@link Path} to be guessed. The file extension of the path - * MAY be taken into consideration. + * @param bytes + * Bytes to check. Note that only the "first bits" of the + * resource is required, e.g. the initial 8192 bytes. * @return A list of guessed media types */ public List<String> guessMediaTypes(byte[] bytes); @@ -90,8 +91,8 @@ public interface MediaTypeDetector { * The returned list will never be empty, as it will always contain either * <code>text/plain</code> or <code>application/octet-stream</code> * - * @param path - * A {@link Path} to be guessed. Any file extension of the URL + * @param uri + * A {@link URI} to be guessed. Any file extension of the URL * MAY be taken into consideration. * @return A list of guessed media types * @throws IOException If the URL can't be accessed (e.g. a network issue) @@ -99,4 +100,33 @@ public interface MediaTypeDetector { public List<String> guessMediaTypes(URI uri) throws IOException; + /** + * Dummy MediaTypeDetector implementation + * <p> + * This can be used for test purposes which don't want to use + * MediaTypeDetectorImpl. + * <p> + * This class always return "application/octet-stream" as the media type. + * + */ + public static class Dummy implements MediaTypeDetector { + private static List<String> BINARY = Collections.singletonList("application/octet-stream"); + @Override + public List<String> guessMediaTypes(Path path) throws IOException { + return BINARY; + } + @Override + public List<String> guessMediaTypes(String string) { + return BINARY; + } + @Override + public List<String> guessMediaTypes(byte[] bytes) { + return BINARY; + } + @Override + public List<String> guessMediaTypes(URI uri) throws IOException { + return BINARY; + } + } + } http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-impl/pom.xml ---------------------------------------------------------------------- diff --git a/taverna-renderers-impl/pom.xml b/taverna-renderers-impl/pom.xml index 059e141..49a9333 100644 --- a/taverna-renderers-impl/pom.xml +++ b/taverna-renderers-impl/pom.xml @@ -72,6 +72,12 @@ <artifactId>com.springsource.org.jdom</artifactId> <version>${jdom.version}</version> </dependency> + <dependency> + <groupId>org.apache.tika</groupId> + <artifactId>tika-core</artifactId> + <version>1.13</version> + </dependency> + </dependencies> </project> http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-impl/src/main/java/org/apache/taverna/renderers/impl/MediaTypeDetectorImpl.java ---------------------------------------------------------------------- diff --git a/taverna-renderers-impl/src/main/java/org/apache/taverna/renderers/impl/MediaTypeDetectorImpl.java b/taverna-renderers-impl/src/main/java/org/apache/taverna/renderers/impl/MediaTypeDetectorImpl.java index c8b6fb7..f5cc70c 100644 --- a/taverna-renderers-impl/src/main/java/org/apache/taverna/renderers/impl/MediaTypeDetectorImpl.java +++ b/taverna-renderers-impl/src/main/java/org/apache/taverna/renderers/impl/MediaTypeDetectorImpl.java @@ -20,10 +20,13 @@ package org.apache.taverna.renderers.impl; import java.io.IOException; import java.net.URI; +import java.nio.charset.StandardCharsets; import java.nio.file.Path; +import java.util.ArrayList; import java.util.List; import org.apache.taverna.renderers.MediaTypeDetector; +import org.apache.tika.Tika; /** * Media Type detector that uses Apache Tika @@ -31,28 +34,72 @@ import org.apache.taverna.renderers.MediaTypeDetector; */ public class MediaTypeDetectorImpl implements MediaTypeDetector { + Tika tika = new Tika(); + String BINARY = "application/octet-stream"; + String TEXT_PLAIN = "text/plain"; + @Override public List<String> guessMediaTypes(Path path) throws IOException { - // TODO Auto-generated method stub - return null; + List<String> mediaTypes = new ArrayList<>(); + String detected = tika.detect(path); + if (detected != null) { + // Note: Tika does not return null, but its javadoc does not + // make such a promise + mediaTypes.add(detected); + } + if (! mediaTypes.contains(BINARY) && ! mediaTypes.contains(TEXT_PLAIN)) { + // This fallback will also make sure we never return an empty list + mediaTypes.add(BINARY); + } + return mediaTypes; } @Override public List<String> guessMediaTypes(String string) { - // TODO Auto-generated method stub - return null; + List<String> mediaTypes = new ArrayList<>(); + // We'll assume that as a String it can be detected from UTF_8 bytes, + // which makes sense for XML, JSON, SVG, etc + String mediaType = tika.detect(string.getBytes(StandardCharsets.UTF_8)); + if (mediaType != null) { + mediaTypes.add(mediaType); + } + + if (! mediaTypes.contains(BINARY) && ! mediaTypes.contains(TEXT_PLAIN)) { + mediaTypes.add(TEXT_PLAIN); + } + return mediaTypes; } @Override public List<String> guessMediaTypes(byte[] bytes) { - // TODO Auto-generated method stub - return null; + List<String> mediaTypes = new ArrayList<>(); + String detected = tika.detect(bytes); + if (detected != null) { + // Note: Tika does not return null, but its javadoc does not + // make such a promise + mediaTypes.add(detected); + } + if (! mediaTypes.contains(BINARY) && ! mediaTypes.contains(TEXT_PLAIN)) { + // This fallback will also make sure we never return an empty list + mediaTypes.add(BINARY); + } + return mediaTypes; } @Override public List<String> guessMediaTypes(URI uri) throws IOException { - // TODO Auto-generated method stub - return null; + List<String> mediaTypes = new ArrayList<>(); + String detected = tika.detect(uri.toURL()); + if (detected != null) { + // Note: Tika does not return null, but its javadoc does not + // make such a promise + mediaTypes.add(detected); + } + if (! mediaTypes.contains(BINARY) && ! mediaTypes.contains(TEXT_PLAIN)) { + // This fallback will also make sure we never return an empty list + mediaTypes.add(BINARY); + } + return mediaTypes; } } http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-impl/src/test/java/org/apache/taverna/renderers/TestMediaTypeDetector.java ---------------------------------------------------------------------- diff --git a/taverna-renderers-impl/src/test/java/org/apache/taverna/renderers/TestMediaTypeDetector.java b/taverna-renderers-impl/src/test/java/org/apache/taverna/renderers/TestMediaTypeDetector.java new file mode 100644 index 0000000..d5ad73b --- /dev/null +++ b/taverna-renderers-impl/src/test/java/org/apache/taverna/renderers/TestMediaTypeDetector.java @@ -0,0 +1,159 @@ +/* + * Licensed to the Apache Software Foundation (ASF) under one + * or more contributor license agreements. See the NOTICE file + * distributed with this work for additional information + * regarding copyright ownership. The ASF licenses this file + * to you under the Apache License, Version 2.0 (the + * "License"); you may not use this file except in compliance + * with the License. You may obtain a copy of the License at + * + * http://www.apache.org/licenses/LICENSE-2.0 + * + * Unless required by applicable law or agreed to in writing, + * software distributed under the License is distributed on an + * "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY + * KIND, either express or implied. See the License for the + * specific language governing permissions and limitations + * under the License. + */ +package org.apache.taverna.renderers; + +import static org.junit.Assert.assertEquals; + +import java.io.IOException; +import java.io.InputStream; +import java.nio.charset.StandardCharsets; +import java.nio.file.Files; +import java.nio.file.Path; +import java.nio.file.StandardCopyOption; +import java.util.Arrays; +import java.util.List; +import java.util.stream.Collectors; + +import org.apache.taverna.renderers.impl.MediaTypeDetectorImpl; +import org.junit.After; +import org.junit.AfterClass; +import org.junit.Assume; +import org.junit.Before; +import org.junit.BeforeClass; +import org.junit.Test; +import org.junit.runner.RunWith; +import org.junit.runners.Parameterized; +import org.junit.runners.Parameterized.Parameter; +import org.junit.runners.Parameterized.Parameters; + +@RunWith(Parameterized.class) +public class TestMediaTypeDetector { + + public MediaTypeDetector detector = new MediaTypeDetectorImpl(); + + @Parameters(name = "{0}") + public static List<Object[]> expectedMediaTypes() { + // extension -> mediaType + // Each test is represented as "test.$extension" from src/test/resources + return Arrays.asList(new Object[][] { + // TODO: Re-enable ALL of the below and fix in Tika configuration + // (or upstream) - some of these fail in guessByAnonymousPath + // when they can't check the file extension + + // mis-matched as text/plain + //{ "csv", "text/csv" }, + // mis-matched as application/zip + //{ "docx", "application/vnd.openxmlformats-officedocument.wordprocessingml.document" }, + { "html", "text/html" }, + { "jpeg", "image/jpeg" }, + { "ods", "application/vnd.oasis.opendocument.spreadsheet" }, + { "odt", "application/vnd.oasis.opendocument.text" }, + { "pdf", "application/pdf" }, + { "png", "image/png" }, + // { "svg", "image/svg+xml" }, // Mis-matched as application/xml + { "txt", "text/plain" }, + // Mis-matched as application/zip + // { "xlsx", "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet" }, + { "xml", "application/xml" }, + { "zip", "application/zip" } + }); + } + + @Parameter(0) + public String extension; + + @Parameter(1) + public String expectedMediaType; + + private Path path; + + private Path anonymousPath; + + @Before + public void writePaths() throws IOException { + path = Files.createTempFile("test", "." + extension); + try (InputStream in = getClass().getResourceAsStream("/test." + extension)) { + Files.copy(in, path, StandardCopyOption.REPLACE_EXISTING); + } + anonymousPath = Files.createTempFile("test", ""); + Files.copy(path, anonymousPath, StandardCopyOption.REPLACE_EXISTING); + } + + @After + public void deletePaths() throws IOException { + Files.deleteIfExists(path); + Files.deleteIfExists(anonymousPath); + } + + @Test + public void guessByPath() throws Exception { + List<String> guess = detector.guessMediaTypes(path); + assertEquals(expectedMediaType, guess.get(0)); + } + + + @Test + public void guessByAnonymousPath() throws Exception { + List<String> guess = detector.guessMediaTypes(anonymousPath); + assertEquals(expectedMediaType, guess.get(0)); + } + + + @Test + public void guessByUrl() throws Exception { + List<String> guess = detector.guessMediaTypes(path.toUri()); + assertEquals(expectedMediaType, guess.get(0)); + } + + @Test + public void guessByAnonymousUrl() throws Exception { + List<String> guess = detector.guessMediaTypes(anonymousPath.toUri()); + assertEquals(expectedMediaType, guess.get(0)); + } + + @Test + public void guessByBytes() throws Exception { + // Our test-resources are deliberately small, so this won't + // consume too much memory. Normal use of the MediaTypeDetector + // would be to only read the first kilobytes of a file. + byte[] bytes = Files.readAllBytes(path); + List<String> guess = detector.guessMediaTypes(bytes); + assertEquals(expectedMediaType, guess.get(0)); + } + + @Test + public void guessByString() { + List<String> strings; + try { + strings = Files.readAllLines(path, StandardCharsets.UTF_8); + } catch (IOException e) { + Assume.assumeNoException(e); + return; + } + // NOTE: The below will join \r\n to \n + // We assume that any binary formats like PNG failed the above test, + // and that the remaining text-based formats support both kinds of newlines + String joined = strings.stream().limit(5). // first 5 lines + collect(Collectors.joining("\n")); + List<String> guess = detector.guessMediaTypes(joined); + assertEquals(expectedMediaType, guess.get(0)); + } + + +} http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-impl/src/test/resources/README.txt ---------------------------------------------------------------------- diff --git a/taverna-renderers-impl/src/test/resources/README.txt b/taverna-renderers-impl/src/test/resources/README.txt new file mode 100644 index 0000000..ff780ee --- /dev/null +++ b/taverna-renderers-impl/src/test/resources/README.txt @@ -0,0 +1,21 @@ + Licensed to the Apache Software Foundation (ASF) under one or more + contributor license agreements. See the NOTICE file distributed with + this work for additional information regarding copyright ownership. + The ASF licenses this file to You under the Apache License, Version 2.0 + (the "License"); you may not use this file except in compliance with + the License. You may obtain a copy of the License at + + http://www.apache.org/licenses/LICENSE-2.0 + + Unless required by applicable law or agreed to in writing, software + distributed under the License is distributed on an "AS IS" BASIS, + WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. + See the License for the specific language governing permissions and + limitations under the License. + +Note that the test.* resources have all been created specifically for +Apache Taverna (incubating), and the above Apache License text applies. + +Note that for simplicity and to to avoid confusing the +underlying media type detector, the above file header should NOT be +added to these test files, even where possible. \ No newline at end of file http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-impl/src/test/resources/test.csv ---------------------------------------------------------------------- diff --git a/taverna-renderers-impl/src/test/resources/test.csv b/taverna-renderers-impl/src/test/resources/test.csv new file mode 100644 index 0000000..a1bfca8 --- /dev/null +++ b/taverna-renderers-impl/src/test/resources/test.csv @@ -0,0 +1,3 @@ +"Column A","Column B","Column C" +"Hello","There","World" +"Extra","Row","Just in case" http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-impl/src/test/resources/test.docx ---------------------------------------------------------------------- diff --git a/taverna-renderers-impl/src/test/resources/test.docx b/taverna-renderers-impl/src/test/resources/test.docx new file mode 100644 index 0000000..8e5c1a6 Binary files /dev/null and b/taverna-renderers-impl/src/test/resources/test.docx differ http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-impl/src/test/resources/test.html ---------------------------------------------------------------------- diff --git a/taverna-renderers-impl/src/test/resources/test.html b/taverna-renderers-impl/src/test/resources/test.html new file mode 100644 index 0000000..ae0643c --- /dev/null +++ b/taverna-renderers-impl/src/test/resources/test.html @@ -0,0 +1,9 @@ +<!DOCTYPE html> +<html> + <head> + <title>The title</title> + </head> + <body> + <h1>Hello there!</h1> + </body> +</html> \ No newline at end of file http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-impl/src/test/resources/test.jpeg ---------------------------------------------------------------------- diff --git a/taverna-renderers-impl/src/test/resources/test.jpeg b/taverna-renderers-impl/src/test/resources/test.jpeg new file mode 100644 index 0000000..99aaa6f Binary files /dev/null and b/taverna-renderers-impl/src/test/resources/test.jpeg differ http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-impl/src/test/resources/test.ods ---------------------------------------------------------------------- diff --git a/taverna-renderers-impl/src/test/resources/test.ods b/taverna-renderers-impl/src/test/resources/test.ods new file mode 100644 index 0000000..33d9a7d Binary files /dev/null and b/taverna-renderers-impl/src/test/resources/test.ods differ http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-impl/src/test/resources/test.odt ---------------------------------------------------------------------- diff --git a/taverna-renderers-impl/src/test/resources/test.odt b/taverna-renderers-impl/src/test/resources/test.odt new file mode 100644 index 0000000..80785ce Binary files /dev/null and b/taverna-renderers-impl/src/test/resources/test.odt differ http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-impl/src/test/resources/test.pdf ---------------------------------------------------------------------- diff --git a/taverna-renderers-impl/src/test/resources/test.pdf b/taverna-renderers-impl/src/test/resources/test.pdf new file mode 100644 index 0000000..915d3f7 Binary files /dev/null and b/taverna-renderers-impl/src/test/resources/test.pdf differ http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-impl/src/test/resources/test.png ---------------------------------------------------------------------- diff --git a/taverna-renderers-impl/src/test/resources/test.png b/taverna-renderers-impl/src/test/resources/test.png new file mode 100644 index 0000000..6081152 Binary files /dev/null and b/taverna-renderers-impl/src/test/resources/test.png differ http://git-wip-us.apache.org/repos/asf/incubator-taverna-workbench/blob/646e24ca/taverna-renderers-impl/src/test/resources/test.svg ---------------------------------------------------------------------- diff --git a/taverna-renderers-impl/src/test/resources/test.svg 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