Rewrote example in my own words Just one aggregate now, to make test code simpler
Project: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/repo Commit: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/commit/ad352d14 Tree: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/tree/ad352d14 Diff: http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/diff/ad352d14 Branch: refs/heads/master Commit: ad352d14066c376192adfa4ca4b3659b7d0b76c5 Parents: eeb6704 Author: Stian Soiland-Reyes <[email protected]> Authored: Thu May 10 17:07:51 2018 +0100 Committer: Stian Soiland-Reyes <[email protected]> Committed: Thu May 10 17:40:11 2018 +0100 ---------------------------------------------------------------------- .../test/resources/bag-of-bags-manifest.json | 598 +------------------ 1 file changed, 8 insertions(+), 590 deletions(-) ---------------------------------------------------------------------- http://git-wip-us.apache.org/repos/asf/incubator-taverna-language/blob/ad352d14/taverna-robundle/src/test/resources/bag-of-bags-manifest.json ---------------------------------------------------------------------- diff --git a/taverna-robundle/src/test/resources/bag-of-bags-manifest.json b/taverna-robundle/src/test/resources/bag-of-bags-manifest.json index c7d1904..28a94c6 100644 --- a/taverna-robundle/src/test/resources/bag-of-bags-manifest.json +++ b/taverna-robundle/src/test/resources/bag-of-bags-manifest.json @@ -6,7 +6,7 @@ "aggregates": [ { "bundledAs": { - "filename": "adrenal_gland.seed16.tissue.bag.zip", + "filename": "bag1.zip", "folder": "../data/" }, "conformsTo": [ @@ -14,590 +14,7 @@ "https://w3id.org/ro/bagit/profile"; ], "uri": "http://n2t.net/ark:/57799/b90h3c"; - }, - { - "bundledAs": { - "filename": "blood_vessel.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9km3p"; - }, - { - "bundledAs": { - "filename": "bone_element.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9b37v"; - }, - { - "bundledAs": { - "filename": "brain.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b92m31"; - }, - { - "bundledAs": { - "filename": "bronchus.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9t376"; - }, - { - "bundledAs": { - "filename": "esophagus.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9jm3c"; - }, - { - "bundledAs": { - "filename": "extraembryonic_structure.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9b387"; - }, - { - "bundledAs": { - "filename": "eye.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9mx1b"; - }, - { - "bundledAs": { - "filename": "gonad.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9wx0f"; - }, - { - "bundledAs": { - "filename": "heart.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9nd6c"; - }, - { - "bundledAs": { - "filename": "kidney.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9cw9v"; - }, - { - "bundledAs": { - "filename": "large_intestine.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b94d5b"; - }, - { - "bundledAs": { - "filename": "liver.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9vw96"; - }, - { - "bundledAs": { - "filename": "lung.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9md5p"; - }, - { - "bundledAs": { - "filename": "lymphatic_vessel.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9bw9j"; - }, - { - "bundledAs": { - "filename": "lymphoblast.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b93d4n"; - }, - { - "bundledAs": { - "filename": "mammary_gland.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9tw9w"; - }, - { - "bundledAs": { - "filename": "mouth.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9kd5c"; - }, - { - "bundledAs": { - "filename": "muscle_organ.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b99x05"; - }, - { - "bundledAs": { - "filename": "pancreas.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b92d63"; - }, - { - "bundledAs": { - "filename": "prostate_gland.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9t09x"; - }, - { - "bundledAs": { - "filename": "skin.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b95d7d"; - }, - { - "bundledAs": { - "filename": "spinal_cord.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9h67f"; - }, - { - "bundledAs": { - "filename": "stomach.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9566z"; - }, - { - "bundledAs": { - "filename": "thyroid_gland.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9wq1r"; - }, - { - "bundledAs": { - "filename": "tongue.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9n67p"; - }, - { - "bundledAs": { - "filename": "urinary_bladder.seed16.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9cq3v"; - }, - { - "bundledAs": { - "filename": "adrenal_gland.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9cd6w"; - }, - { - "bundledAs": { - "filename": "blood_vessel.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b97q3m"; - }, - { - "bundledAs": { - "filename": "bone_element.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b93x22"; - }, - { - "bundledAs": { - "filename": "brain.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9067s"; - }, - { - "bundledAs": { - "filename": "bronchus.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9vh5w"; - }, - { - "bundledAs": { - "filename": "esophagus.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9qq3z"; - }, - { - "bundledAs": { - "filename": "extraembryonic_structure.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9m092"; - }, - { - "bundledAs": { - "filename": "eye.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9g674"; - }, - { - "bundledAs": { - "filename": "gonad.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9bh57"; - }, - { - "bundledAs": { - "filename": "heart.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b96q39"; - }, - { - "bundledAs": { - "filename": "kidney.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9310b"; - }, - { - "bundledAs": { - "filename": "large_intestine.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9z67g"; - }, - { - "bundledAs": { - "filename": "liver.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9th6z"; - }, - { - "bundledAs": { - "filename": "lung.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9pq3n"; - }, - { - "bundledAs": { - "filename": "lymphatic_vessel.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9k09r"; - }, - { - "bundledAs": { - "filename": "lymphoblast.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9f686"; - }, - { - "bundledAs": { - "filename": "mammary_gland.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b99h5x"; - }, - { - "bundledAs": { - "filename": "mouth.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b95q4c"; - }, - { - "bundledAs": { - "filename": "muscle_organ.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b92093"; - }, - { - "bundledAs": { - "filename": "pancreas.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9x96t"; - }, - { - "bundledAs": { - "filename": "prostate_gland.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9sh58"; - }, - { - "bundledAs": { - "filename": "skin.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b91m5g"; - }, - { - "bundledAs": { - "filename": "spinal_cord.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9j09f"; - }, - { - "bundledAs": { - "filename": "stomach.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9d97j"; - }, - { - "bundledAs": { - "filename": "thyroid_gland.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b98h47"; - }, - { - "bundledAs": { - "filename": "tongue.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b94t2b"; - }, - { - "bundledAs": { - "filename": "urinary_bladder.seed20.tissue.bag.zip", - "folder": "../data/" - }, - "conformsTo": [ - "https://tools.ietf.org/html/draft-kunze-bagit-14";, - "https://w3id.org/ro/bagit/profile"; - ], - "uri": "http://n2t.net/ark:/57799/b9109s"; - } + } ], "annotations": [ { @@ -609,13 +26,14 @@ } ], "authoredBy": { - "name": "Ravi Madduri", - "orcid": "http://orcid.org/0000-0003-2130-2887"; + "name": "Stian Soiland-Reyes", + "uri": "mbox:[email protected]", + "orcid": "https://orcid.org/0000-0001-9842-9718"; }, - "authoredOn": "2018-02-14T21:25:20+00:00", + "authoredOn": "2018-05-10T16:07:00+00:00", "createdBy": { "name": "BDBag version: 1.1.5 (Bagit version: 1.6.3)", "uri": "https://github.com/ini-bdds/bdbag"; }, - "createdOn": "2018-02-14T21:25:20+00:00" -} \ No newline at end of file + "createdOn": "2018-05-10T16:07:00+00:00" +}
