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http://wiki.apache.org/hadoop/Hbase/HowToMigrate

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  I had to copy the hadoop-site.xml to a location where it would be picked up 
by the above script -- e.g. from my hadoop 0.19 install to my 
{{{$HBASE_HOME/conf}}} -- so the above script could find the right HDFS 
otherwise it was going against local filesystem.
  
+ In the head of 0.19 is a tool that will tell you if you have successfully 
major compacted your 0.19 data:
+ 
+ {{{$ ./bin/hbase org.apache.hadoop.hbase.util.FSUtils}}}
+ 
+ It will print out:
+ 
+ {{{majorCompacted=true}}}
+ 
+ If it prints false, do a {{{bin/hbase fs -lsr /}}} on your hbase directory 
and figure out what hasn't been major compacted.  If a catalog table -- -ROOT- 
or .META. -- then use the above HRegion tool to compact.  Otherwise, start up 
0.19 again, fire up shell and try major compact again.
+ 
+ 
  ===== Can you back up your data? =====
  Migration has been tested but if you have sufficient space in hdfs to make a 
copy of your hbase rootdir, do so.  Just in case.  Use hdfs distcp.
  

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