[
https://issues.apache.org/jira/browse/HADOOP-13811?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=15932806#comment-15932806
]
Steve Loughran commented on HADOOP-13811:
-----------------------------------------
+stack trace of spark dataframes, this time on Hadoop 2.8.0 RC3. This is same
situation as before: error rising during stream interrupt/teardown, where I
think an interrupted exception is being converted to an abort
{code}
2017-03-20 15:09:31,440 [JobGenerator] WARN dstream.FileInputDStream
(Logging.scala:logWarning(87)) - Error finding new files
org.apache.hadoop.fs.s3a.AWSClientIOException: getFileStatus on
spark-cloud/S3AStreamingSuite/streaming/streaming/:
com.amazonaws.AmazonClientException: Failed to sanitize XML document destined
for handler class
com.amazonaws.services.s3.model.transform.XmlResponsesSaxParser$ListBucketHandler:
Failed to sanitize XML document destined for handler class
com.amazonaws.services.s3.model.transform.XmlResponsesSaxParser$ListBucketHandler
at
org.apache.hadoop.fs.s3a.S3AUtils.translateException(S3AUtils.java:128)
at
org.apache.hadoop.fs.s3a.S3AFileSystem.getFileStatus(S3AFileSystem.java:1638)
at
org.apache.hadoop.fs.s3a.S3AFileSystem.innerListStatus(S3AFileSystem.java:1393)
at
org.apache.hadoop.fs.s3a.S3AFileSystem.listStatus(S3AFileSystem.java:1369)
at org.apache.hadoop.fs.Globber.listStatus(Globber.java:76)
at org.apache.hadoop.fs.Globber.doGlob(Globber.java:234)
at org.apache.hadoop.fs.Globber.glob(Globber.java:148)
at org.apache.hadoop.fs.FileSystem.globStatus(FileSystem.java:1704)
at
org.apache.hadoop.fs.s3a.S3AFileSystem.globStatus(S3AFileSystem.java:2030)
at
org.apache.spark.streaming.dstream.FileInputDStream.findNewFiles(FileInputDStream.scala:205)
at
org.apache.spark.streaming.dstream.FileInputDStream.compute(FileInputDStream.scala:149)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1$$anonfun$apply$7.apply(DStream.scala:342)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1$$anonfun$apply$7.apply(DStream.scala:342)
at scala.util.DynamicVariable.withValue(DynamicVariable.scala:58)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1.apply(DStream.scala:341)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1.apply(DStream.scala:341)
at
org.apache.spark.streaming.dstream.DStream.createRDDWithLocalProperties(DStream.scala:416)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1.apply(DStream.scala:336)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1.apply(DStream.scala:334)
at scala.Option.orElse(Option.scala:289)
at
org.apache.spark.streaming.dstream.DStream.getOrCompute(DStream.scala:331)
at
org.apache.spark.streaming.dstream.MappedDStream.compute(MappedDStream.scala:36)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1$$anonfun$apply$7.apply(DStream.scala:342)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1$$anonfun$apply$7.apply(DStream.scala:342)
at scala.util.DynamicVariable.withValue(DynamicVariable.scala:58)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1.apply(DStream.scala:341)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1.apply(DStream.scala:341)
at
org.apache.spark.streaming.dstream.DStream.createRDDWithLocalProperties(DStream.scala:416)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1.apply(DStream.scala:336)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1.apply(DStream.scala:334)
at scala.Option.orElse(Option.scala:289)
at
org.apache.spark.streaming.dstream.DStream.getOrCompute(DStream.scala:331)
at
org.apache.spark.streaming.dstream.FilteredDStream.compute(FilteredDStream.scala:36)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1$$anonfun$apply$7.apply(DStream.scala:342)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1$$anonfun$apply$7.apply(DStream.scala:342)
at scala.util.DynamicVariable.withValue(DynamicVariable.scala:58)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1.apply(DStream.scala:341)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1.apply(DStream.scala:341)
at
org.apache.spark.streaming.dstream.DStream.createRDDWithLocalProperties(DStream.scala:416)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1.apply(DStream.scala:336)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1.apply(DStream.scala:334)
at scala.Option.orElse(Option.scala:289)
at
org.apache.spark.streaming.dstream.DStream.getOrCompute(DStream.scala:331)
at
org.apache.spark.streaming.dstream.MappedDStream.compute(MappedDStream.scala:36)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1$$anonfun$apply$7.apply(DStream.scala:342)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1$$anonfun$apply$7.apply(DStream.scala:342)
at scala.util.DynamicVariable.withValue(DynamicVariable.scala:58)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1.apply(DStream.scala:341)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1$$anonfun$1.apply(DStream.scala:341)
at
org.apache.spark.streaming.dstream.DStream.createRDDWithLocalProperties(DStream.scala:416)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1.apply(DStream.scala:336)
at
org.apache.spark.streaming.dstream.DStream$$anonfun$getOrCompute$1.apply(DStream.scala:334)
at scala.Option.orElse(Option.scala:289)
at
org.apache.spark.streaming.dstream.DStream.getOrCompute(DStream.scala:331)
at
org.apache.spark.streaming.dstream.ForEachDStream.generateJob(ForEachDStream.scala:48)
at
org.apache.spark.streaming.DStreamGraph$$anonfun$1.apply(DStreamGraph.scala:122)
at
org.apache.spark.streaming.DStreamGraph$$anonfun$1.apply(DStreamGraph.scala:121)
at
scala.collection.TraversableLike$$anonfun$flatMap$1.apply(TraversableLike.scala:241)
at
scala.collection.TraversableLike$$anonfun$flatMap$1.apply(TraversableLike.scala:241)
at
scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at
scala.collection.TraversableLike$class.flatMap(TraversableLike.scala:241)
at scala.collection.AbstractTraversable.flatMap(Traversable.scala:104)
at
org.apache.spark.streaming.DStreamGraph.generateJobs(DStreamGraph.scala:121)
at
org.apache.spark.streaming.scheduler.JobGenerator$$anonfun$3.apply(JobGenerator.scala:249)
at
org.apache.spark.streaming.scheduler.JobGenerator$$anonfun$3.apply(JobGenerator.scala:247)
at scala.util.Try$.apply(Try.scala:192)
at
org.apache.spark.streaming.scheduler.JobGenerator.generateJobs(JobGenerator.scala:247)
at
org.apache.spark.streaming.scheduler.JobGenerator.org$apache$spark$streaming$scheduler$JobGenerator$$processEvent(JobGenerator.scala:183)
at
org.apache.spark.streaming.scheduler.JobGenerator$$anon$1.onReceive(JobGenerator.scala:89)
at
org.apache.spark.streaming.scheduler.JobGenerator$$anon$1.onReceive(JobGenerator.scala:88)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48)
Caused by: com.amazonaws.AmazonClientException: Failed to sanitize XML document
destined for handler class
com.amazonaws.services.s3.model.transform.XmlResponsesSaxParser$ListBucketHandler
at
com.amazonaws.services.s3.model.transform.XmlResponsesSaxParser.sanitizeXmlDocument(XmlResponsesSaxParser.java:222)
at
com.amazonaws.services.s3.model.transform.XmlResponsesSaxParser.parseListBucketObjectsResponse(XmlResponsesSaxParser.java:299)
at
com.amazonaws.services.s3.model.transform.Unmarshallers$ListObjectsUnmarshaller.unmarshall(Unmarshallers.java:77)
at
com.amazonaws.services.s3.model.transform.Unmarshallers$ListObjectsUnmarshaller.unmarshall(Unmarshallers.java:74)
at
com.amazonaws.services.s3.internal.S3XmlResponseHandler.handle(S3XmlResponseHandler.java:62)
at
com.amazonaws.services.s3.internal.S3XmlResponseHandler.handle(S3XmlResponseHandler.java:31)
at
com.amazonaws.http.AmazonHttpClient.handleResponse(AmazonHttpClient.java:1072)
at
com.amazonaws.http.AmazonHttpClient.executeOneRequest(AmazonHttpClient.java:746)
at
com.amazonaws.http.AmazonHttpClient.executeHelper(AmazonHttpClient.java:489)
at
com.amazonaws.http.AmazonHttpClient.execute(AmazonHttpClient.java:310)
at
com.amazonaws.services.s3.AmazonS3Client.invoke(AmazonS3Client.java:3785)
at
com.amazonaws.services.s3.AmazonS3Client.invoke(AmazonS3Client.java:3738)
at
com.amazonaws.services.s3.AmazonS3Client.listObjects(AmazonS3Client.java:653)
at
org.apache.hadoop.fs.s3a.S3AFileSystem.listObjects(S3AFileSystem.java:918)
at
org.apache.hadoop.fs.s3a.S3AFileSystem.getFileStatus(S3AFileSystem.java:1611)
... 70 more
Caused by: com.amazonaws.AbortedException:
at
com.amazonaws.internal.SdkFilterInputStream.abortIfNeeded(SdkFilterInputStream.java:51)
at
com.amazonaws.internal.SdkFilterInputStream.read(SdkFilterInputStream.java:71)
at
com.amazonaws.event.ProgressInputStream.read(ProgressInputStream.java:151)
at sun.nio.cs.StreamDecoder.readBytes(StreamDecoder.java:284)
at sun.nio.cs.StreamDecoder.implRead(StreamDecoder.java:326)
at sun.nio.cs.StreamDecoder.read(StreamDecoder.java:178)
at java.io.InputStreamReader.read(InputStreamReader.java:184)
at java.io.BufferedReader.read1(BufferedReader.java:210)
at java.io.BufferedReader.read(BufferedReader.java:286)
at java.io.Reader.read(Reader.java:140)
at
com.amazonaws.services.s3.model.transform.XmlResponsesSaxParser.sanitizeXmlDocument(XmlResponsesSaxParser.java:195)
... 84 more
{code}
This is something you don't want to retry, instead the inner AbortedException
should be scanned for and uprated to something. InterruptedIOE? We could add
that in translateException
> s3a: getFileStatus fails with com.amazonaws.AmazonClientException: Failed to
> sanitize XML document destined for handler class
> -----------------------------------------------------------------------------------------------------------------------------
>
> Key: HADOOP-13811
> URL: https://issues.apache.org/jira/browse/HADOOP-13811
> Project: Hadoop Common
> Issue Type: Sub-task
> Components: fs/s3
> Affects Versions: 2.8.0, 2.7.3
> Reporter: Steve Loughran
>
> Sometimes, occasionally, getFileStatus() fails with a stack trace starting
> with {{com.amazonaws.AmazonClientException: Failed to sanitize XML document
> destined for handler class}}.
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