[
https://issues.apache.org/jira/browse/HADOOP-17708?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17347885#comment-17347885
]
Jonathan mercier commented on HADOOP-17708:
-------------------------------------------
After turn on full log message with the flags {color:#4c9aff}-e -X{color}
{code:bash}
mvn package -Pdist,native -Drequire.snappy=true -DskipTests -Dtar -e -X
{code}
I can see that the real problem is here:
{code}
Unable to find source-code formatter for language: log. Available languages
are: actionscript, ada, applescript, bash, c, c#, c++, cpp, css, erlang, go,
groovy, haskell, html, java, javascript, js, json, lua, none, nyan, objc, perl,
php, python, r, rainbow, ruby, scala, sh, sql, swift, visualbasic, xml,
yaml[WARNING] [ 12%] Built target test_bulk_crc32
[WARNING] make[1]: Leaving directory
'/hadoop-3.2.2-src/hadoop-common-project/hadoop-common/target/native'
[WARNING]
/hadoop-3.2.2-src/hadoop-common-project/hadoop-common/src/main/native/src/exception.c:
In function ‘terror’:
[WARNING]
/hadoop-3.2.2-src/hadoop-common-project/hadoop-common/src/main/native/src/exception.c:118:34:
error: ‘sys_nerr’ undeclared (first use in this function)
[WARNING] 118 | if ((errnum < 0) || (errnum >= sys_nerr)) {
[WARNING] | ^~~~~~~~
[WARNING]
/hadoop-3.2.2-src/hadoop-common-project/hadoop-common/src/main/native/src/exception.c:118:34:
note: each undeclared identifier is reported only once for each function it
appears in
[WARNING]
/hadoop-3.2.2-src/hadoop-common-project/hadoop-common/src/main/native/src/exception.c:121:10:
error: ‘sys_errlist’ undeclared (first use in this function)
[WARNING] 121 | return sys_errlist[errnum];
[WARNING] | ^~~~~~~~~~~
[WARNING]
/hadoop-3.2.2-src/hadoop-common-project/hadoop-common/src/main/native/src/exception.c:123:1:
warning: control reaches end of non-void function [-Wreturn-type]
[WARNING] 123 | }
[WARNING] | ^
[WARNING] make[2]: *** [CMakeFiles/hadoop_static.dir/build.make:82:
CMakeFiles/hadoop_static.dir/main/native/src/exception.c.o] Error 1
[WARNING] make[1]: *** [CMakeFiles/Makefile2:99:
CMakeFiles/hadoop_static.dir/all] Error 2
[WARNING] make[1]: *** Waiting for unfinished jobs....
{code}
So they are no problem with pthreads but the use from hadoop of deprecated
glibc method {color:#4c9aff}{{sys_errlist}}{color} ref:
[https://stackoverflow.com/questions/33948508/why-is-sys-errlist-deprecated-in-glibc]
> Fail to build hadoop-common from source on Fedora
> -------------------------------------------------
>
> Key: HADOOP-17708
> URL: https://issues.apache.org/jira/browse/HADOOP-17708
> Project: Hadoop Common
> Issue Type: Bug
> Reporter: Jonathan mercier
> Priority: Major
>
> Dear I tried to build hadoop from source with a vanilla fedora 34
> {code:bash}
> dnf group install -y "Development Tools" \
> && dnf install -y java-1.8.0-openjdk-devel fuse-devel snappy-java
> snappy-devel jansson-devel protobuf zlib-devel libzstd-devel \
> maven-1:3.6.3 cmake gcc-c++ ant protobuf-compiler
> protobuf-java slf4j
> export JAVA_HOME=/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.292.b10-0.fc34.x86_64/
> export MAVEN_OPTS="-Xms2048M -Xmx4096M"
> export
> PATH="/usr/lib/jvm/java-1.8.0-openjdk-1.8.0.292.b10-0.fc34.x86_64/bin/:$PATH"
> export CC=/usr/bin/gcc
> export CXX=/usr/bin/g++
> curl -LO
> https://apache.mediamirrors.org/hadoop/common/hadoop-3.2.2/hadoop-3.2.2-src.tar.gz
> tar xf hadoop-3.2.2-src.tar.gz && cd hadoop-3.2.2-src
> mvn package -Pdist,native -Drequire.snappy=true -DskipTests -Dtar
> {code}
> But I have this error
> {code:java}
> at org.apache.hadoop.maven.plugin.cmakebuilder.CompileMojo.runMake
> (CompileMojo.java:229)
>
>
> at org.apache.hadoop.maven.plugin.cmakebuilder.CompileMojo.execute
> (CompileMojo.java:98)
>
>
> at org.apache.maven.plugin.DefaultBuildPluginManager.executeMojo
> (DefaultBuildPluginManager.java:137)
>
>
> at org.apache.maven.lifecycle.internal.MojoExecutor.execute
> (MojoExecutor.java:210)
>
>
> at org.apache.maven.lifecycle.internal.MojoExecutor.execute
> (MojoExecutor.java:156)
>
>
> at org.apache.maven.lifecycle.internal.MojoExecutor.execute
> (MojoExecutor.java:148)
>
>
> at
> org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject
> (LifecycleModuleBuilder.java:117)
>
>
> at
> org.apache.maven.lifecycle.internal.LifecycleModuleBuilder.buildProject
> (LifecycleModuleBuilder.java:81)
>
>
> at
> org.apache.maven.lifecycle.internal.builder.singlethreaded.SingleThreadedBuilder.build
> (SingleThreadedBuilder.java:56)
>
>
> at org.apache.maven.lifecycle.internal.LifecycleStarter.execute
> (LifecycleStarter.java:128)
>
>
> at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:305)
>
>
>
> at org.apache.maven.DefaultMaven.doExecute (DefaultMaven.java:192)
>
>
>
> at org.apache.maven.DefaultMaven.execute (DefaultMaven.java:105)
>
>
>
> at org.apache.maven.cli.MavenCli.execute (MavenCli.java:957)
>
>
>
> at org.apache.maven.cli.MavenCli.doMain (MavenCli.java:289)
>
>
>
> at org.apache.maven.cli.MavenCli.main (MavenCli.java:193)
>
>
>
> at sun.reflect.NativeMethodAccessorImpl.invoke0 (Native Method)
>
>
>
> at sun.reflect.NativeMethodAccessorImpl.invoke
> (NativeMethodAccessorImpl.java:62)
>
>
>
> at sun.reflect.DelegatingMethodAccessorImpl.invoke
> (DelegatingMethodAccessorImpl.java:43)
>
>
> at java.lang.reflect.Method.invoke (Method.java:498)
>
>
>
> at org.codehaus.plexus.classworlds.launcher.Launcher.launchEnhanced
> (Launcher.java:282)
>
>
> at org.codehaus.plexus.classworlds.launcher.Launcher.launch
> (Launcher.java:225)
>
>
> at org.codehaus.plexus.classworlds.launcher.Launcher.mainWithExitCode
> (Launcher.java:406)
>
>
> at org.codehaus.plexus.classworlds.launcher.Launcher.main
> (Launcher.java:347)
>
>
> [ERROR]
>
>
>
> [ERROR]
>
>
>
> [ERROR] For more information about the errors and possible solutions, please
> read the following articles:
>
>
> [ERROR] [Help 1]
> http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException
>
>
>
> [ERROR]
>
>
>
> [ERROR] After correcting the problems, you can resume the build with the
> command
>
>
> [ERROR] mvn <args> -rf :hadoop-common
>
> {code}
> If we take a look to cmake log
> I have:
> {code:c}
> gmake[1]: *** [CMakeFiles/cmTC_82239.dir/build.make:106: cmTC_82239] Error 1
>
>
>
> gmake[1]: Leaving directory
> '/hadoop-3.2.2-src/hadoop-common-project/hadoop-common/target/native/CMakeFiles/CMakeTmp'
>
>
>
> gmake: *** [Makefile:140: cmTC_82239/fast] Error 2
>
>
>
>
>
>
>
>
>
>
>
> Source file was:
>
>
>
> #include <pthread.h>
>
>
>
>
>
>
>
> static void* test_func(void* data)
>
>
>
> {
>
>
>
> return data;
>
>
>
> }
>
>
>
>
>
>
>
> int main(void)
>
>
>
> {
>
>
>
> pthread_t thread;
>
>
>
> pthread_create(&thread, NULL, test_func, NULL);
>
>
>
> pthread_detach(thread);
>
>
>
> pthread_cancel(thread);
>
>
>
> pthread_join(thread, NULL);
>
>
>
> pthread_atfork(NULL, NULL, NULL);
>
>
>
> pthread_exit(NULL);
>
>
>
>
>
>
>
> return 0;
>
>
>
> }
>
>
>
>
>
>
>
> Determining if the function pthread_create exists in the pthreads failed with
> the following output:
>
>
> Change Dir:
> /hadoop-3.2.2-src/hadoop-common-project/hadoop-common/target/native/CMakeFiles/CMakeTmp
>
>
>
>
>
>
>
> Run Build Command(s):/usr/bin/gmake cmTC_2b9ff/fast && /usr/bin/gmake -f
> CMakeFiles/cmTC_2b9ff.dir/build.make CMakeFiles/cmTC_2b9ff.dir/build
>
>
> gmake[1]: Entering directory
> '/hadoop-3.2.2-src/hadoop-common-project/hadoop-common/target/native/CMakeFiles/CMakeTmp'
>
>
>
> Building C object CMakeFiles/cmTC_2b9ff.dir/CheckFunctionExists.c.o
>
>
>
> /usr/bin/cc -DCHECK_FUNCTION_EXISTS=pthread_create -o
> CMakeFiles/cmTC_2b9ff.dir/CheckFunctionExists.c.o -c
> /usr/share/cmake/Modules/CheckFunctionExists.c
>
>
> Linking C executable cmTC_2b9ff
>
>
>
> /usr/bin/cmake -E cmake_link_script CMakeFiles/cmTC_2b9ff.dir/link.txt
> --verbose=1
>
>
> /usr/bin/cc -DCHECK_FUNCTION_EXISTS=pthread_create -rdynamic
> CMakeFiles/cmTC_2b9ff.dir/CheckFunctionExists.c.o -o cmTC_2b9ff -lpthreads
>
>
> /usr/bin/ld: cannot find -lpthreads
>
>
>
> collect2: error: ld returned 1 exit status
>
>
>
> gmake[1]: *** [CMakeFiles/cmTC_2b9ff.dir/build.make:106: cmTC_2b9ff] Error 1
>
>
>
> gmake[1]: Leaving directory
> '/hadoop-3.2.2-src/hadoop-common-project/hadoop-common/target/native/CMakeFiles/CMakeTmp'
>
>
>
> gmake: *** [Makefile:140: cmTC_2b9ff/fast] Error 2
> {code}
> and if I create the C code shown above and build with `-lpthread` that works
> fine
> So as I use cmake 3.19.7, is it an old cmake bug ?
> Thanks for your help
> best regards
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