[ https://issues.apache.org/jira/browse/HADOOP-18173 ]
Tayfun deleted comment on HADOOP-18173:
---------------------------------
was (Author: JIRAUSER290666):
Greetings. I'm quite new to the project, investigating a similar issue.
If i may ask, can you have a look at `getFinalPath` where that exception is
thrown? It feels like `relativeSrcUri` must be the relative path between `src`
and `destination`, instead of `source`
!image-2022-06-08-15-12-17-066.png!
> S3a copyFromLocalOperation doesn't support single file
> ------------------------------------------------------
>
> Key: HADOOP-18173
> URL: https://issues.apache.org/jira/browse/HADOOP-18173
> Project: Hadoop Common
> Issue Type: Bug
> Components: fs/s3
> Affects Versions: 3.3.2
> Environment: Hadoop version 3.3.2
> Spark version 3.4.0-SNAPSHOT
> use minio:latest to mock S3 filesystem
>
> Reporter: qian
> Priority: Major
> Attachments: minio.yaml
>
>
> Spark job uses aws s3 as fileSystem and calls
> {code:java}
> fs.copyFromLocalFile(delSrc, overwrite, src, dest)
> delSrc = false
> overwrite = true
> src =
> "/Users/hengzhen.sq/IdeaProjects/spark/dist/examples/jars/spark-examples_2.12-3.4.0-SNAPSHOT.jar"
> dest =
> "s3a://spark/spark-upload-a703d8e7-8dd2-4e29-beca-b4df2fedefbd/spark-examples_2.12-3.4.0-SNAPSHOT.jar"{code}
> Then throw a PathIOException, message is as follow
> {code:java}
> Exception in thread "main" org.apache.spark.SparkException: Uploading file
> /Users/hengzhen.sq/IdeaProjects/spark/dist/examples/jars/spark-examples_2.12-3.4.0-SNAPSHOT.jar
> failed...
> at
> org.apache.spark.deploy.k8s.KubernetesUtils$.uploadFileUri(KubernetesUtils.scala:332)
>
> at
> org.apache.spark.deploy.k8s.KubernetesUtils$.$anonfun$uploadAndTransformFileUris$1(KubernetesUtils.scala:277)
>
> at scala.collection.TraversableLike.$anonfun$map$1(TraversableLike.scala:286)
>
> at scala.collection.mutable.ResizableArray.foreach(ResizableArray.scala:62)
>
> at scala.collection.mutable.ResizableArray.foreach$(ResizableArray.scala:55)
>
> at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:49)
> at scala.collection.TraversableLike.map(TraversableLike.scala:286)
> at scala.collection.TraversableLike.map$(TraversableLike.scala:279)
> at scala.collection.AbstractTraversable.map(Traversable.scala:108)
> at
> org.apache.spark.deploy.k8s.KubernetesUtils$.uploadAndTransformFileUris(KubernetesUtils.scala:275)
>
> at
> org.apache.spark.deploy.k8s.features.BasicDriverFeatureStep.$anonfun$getAdditionalPodSystemProperties$1(BasicDriverFeatureStep.scala:187)
>
> at scala.collection.immutable.List.foreach(List.scala:431)
> at
> org.apache.spark.deploy.k8s.features.BasicDriverFeatureStep.getAdditionalPodSystemProperties(BasicDriverFeatureStep.scala:178)
> at
> org.apache.spark.deploy.k8s.submit.KubernetesDriverBuilder.$anonfun$buildFromFeatures$5(KubernetesDriverBuilder.scala:86)
> at
> scala.collection.LinearSeqOptimized.foldLeft(LinearSeqOptimized.scala:126)
>
> at
> scala.collection.LinearSeqOptimized.foldLeft$(LinearSeqOptimized.scala:122)
>
> at scala.collection.immutable.List.foldLeft(List.scala:91)
> at
> org.apache.spark.deploy.k8s.submit.KubernetesDriverBuilder.buildFromFeatures(KubernetesDriverBuilder.scala:84)
>
> at
> org.apache.spark.deploy.k8s.submit.Client.run(KubernetesClientApplication.scala:104)
>
> at
> org.apache.spark.deploy.k8s.submit.KubernetesClientApplication.$anonfun$run$5(KubernetesClientApplication.scala:248)
>
> at
> org.apache.spark.deploy.k8s.submit.KubernetesClientApplication.$anonfun$run$5$adapted(KubernetesClientApplication.scala:242)
>
> at org.apache.spark.util.Utils$.tryWithResource(Utils.scala:2738)
> at
> org.apache.spark.deploy.k8s.submit.KubernetesClientApplication.run(KubernetesClientApplication.scala:242)
>
> at
> org.apache.spark.deploy.k8s.submit.KubernetesClientApplication.start(KubernetesClientApplication.scala:214)
>
> at
> org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:958)
>
> at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:180)
>
> at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:203)
> at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:90)
> at
> org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:1046)
>
> at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:1055)
> at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)Caused by:
> org.apache.spark.SparkException: Error uploading file
> spark-examples_2.12-3.4.0-SNAPSHOT.jar
> at
> org.apache.spark.deploy.k8s.KubernetesUtils$.uploadFileToHadoopCompatibleFS(KubernetesUtils.scala:355)
>
> at
> org.apache.spark.deploy.k8s.KubernetesUtils$.uploadFileUri(KubernetesUtils.scala:328)
>
> ... 30 more
> Caused by: org.apache.hadoop.fs.PathIOException: `Cannot get relative path
> for
> URI:file:///Users/hengzhen.sq/IdeaProjects/spark/dist/examples/jars/spark-examples_2.12-3.4.0-SNAPSHOT.jar':
> Input/output error
> at
> apache.hadoop.fs.s3a.impl.CopyFromLocalOperation.getFinalPath(CopyFromLocalOperation.java:365)
>
> at
> org.apache.hadoop.fs.s3a.impl.CopyFromLocalOperation.uploadSourceFromFS(CopyFromLocalOperation.java:226)
>
> at
> org.apache.hadoop.fs.s3a.impl.CopyFromLocalOperation.execute(CopyFromLocalOperation.java:170)
>
> at
> org.apache.hadoop.fs.s3a.S3AFileSystem.lambda$copyFromLocalFile$25(S3AFileSystem.java:3920)
>
> at
> org.apache.hadoop.fs.statistics.impl.IOStatisticsBinding.lambda$trackDurationOfOperation$5(IOStatisticsBinding.java:499)
> at
> org.apache.hadoop.fs.statistics.impl.IOStatisticsBinding.trackDuration(IOStatisticsBinding.java:444)
>
> at
> org.apache.hadoop.fs.s3a.S3AFileSystem.trackDurationAndSpan(S3AFileSystem.java:2337)
>
> at
> org.apache.hadoop.fs.s3a.S3AFileSystem.trackDurationAndSpan(S3AFileSystem.java:2356)
>
> at
> org.apache.hadoop.fs.s3a.S3AFileSystem.copyFromLocalFile(S3AFileSystem.java:3913)
>
> at
> org.apache.spark.deploy.k8s.KubernetesUtils$.uploadFileToHadoopCompatibleFS(KubernetesUtils.scala:352)
>
> ... 31 more {code}
> I add some logs
> {code:java}
> 22/03/25 09:33:24 INFO KubernetesUtils: Uploading file:
> /Users/hengzhen.sq/IdeaProjects/spark/dist/examples/jars/spark-examples_2.12-3.4.0-SNAPSHOT.jar
> to dest:
> s3a://spark/spark-upload-a703d8e7-8dd2-4e29-beca-b4df2fedefbd/spark-examples_2.12-3.4.0-SNAPSHOT.jar...
> 22/03/25 09:33:24 INFO S3AFileSystem: Copying local file from
> /Users/hengzhen.sq/IdeaProjects/spark/dist/examples/jars/spark-examples_2.12-3.4.0-SNAPSHOT.jar
> to
> s3a://spark/spark-upload-a703d8e7-8dd2-4e29-beca-b4df2fedefbd/spark-examples_2.12-3.4.0-SNAPSHOT.jar
> 22/03/25 09:33:24 INFO CopyFromLocalOperation: Copying local file from
> /Users/hengzhen.sq/IdeaProjects/spark/dist/examples/jars/spark-examples_2.12-3.4.0-SNAPSHOT.jar
> to
> s3a://spark/spark-upload-a703d8e7-8dd2-4e29-beca-b4df2fedefbd/spark-examples_2.12-3.4.0-SNAPSHOT.jar
> 22/03/25 09:33:24 INFO CopyFromLocalOperation:
> execute#CopyFromLocalOperation, sourceFile is
> /Users/hengzhen.sq/IdeaProjects/spark/dist/examples/jars/spark-examples_2.12-3.4.0-SNAPSHOT.jar
> 22/03/25 09:33:24 INFO CopyFromLocalOperation:
> uploadSourceFromFS#CopyFromLocalOperation, localFile 1: path is
> LocatedFileStatus{path=file:/Users/hengzhen.sq/IdeaProjects/spark/dist/examples/jars/spark-examples_2.12-3.4.0-SNAPSHOT.jar;
> isDirectory=false; length=1567474; replication=1; blocksize=33554432;
> modification_time=1647874074000; access_time=1647874074000;
> owner=hengzhen.sq; group=staff; permission=rw-r--r--; isSymlink=false;
> hasAcl=false; isEncrypted=false; isErasureCoded=false}
> 22/03/25 09:33:24 INFO CopyFromLocalOperation:
> getFinalPath#CopyFromLocalOperation, src is
> file:/Users/hengzhen.sq/IdeaProjects/spark/dist/examples/jars/spark-examples_2.12-3.4.0-SNAPSHOT.jar,
> source is
> /Users/hengzhen.sq/IdeaProjects/spark/dist/examples/jars/spark-examples_2.12-3.4.0-SNAPSHOT.jar
> {code}
> It looks like copyFromLocalOperation doesn't support single file.
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