It may be that you have "slow" setting for moving to the next residue. You need to set to "No smooth recentering" in the preferences. The "smooth recentering" is absolutely unnecessary feature and should be eliminated (my opinion).

Maia

Paul Emsley wrote:
Pierre Aller wrote:
Hi all,

I am using coot 0.6-pre-1 (revision 2334) on mac os X 10.6.1, and I encountered a problem with the rotamer function. When I clicked on rotamer and then then on a residue, the graphic window closed immediately and I have this error message: */
/*
*/Click on an atom in a residue for which you wish to see rotamers/*
*/(setup-rotamers    1)/*
*/(0) CA /1/chainid="D"/60/LYS, D occ: 1 with B-factor: 103.55 element: C at (66.121,144.282,-35.302) : 0.082298/*
*/ in fill_rotamer_selection_buttons altconf is ::/*
*/terminate called after throwing an instance of 'std::runtime_error'/*
*/ what(): Can't fill atom_quad with indices [torsion-restraint: hh CD CE NZ HZ3 60 30 3]/* *//sw/bin/coot: line 5: 1694 Abort trap /sw/bin/coot-real "$@"/*

Is it a known bug


It is a heretofore unknown bug

or is it coming from me?

certainly not. This kind of thing is never "user" fault. No matter the bizarre state of you lysine, Coot should not crash.



Moreover, since I switched to 10.6.1, coot is "slower". When I used the space bar to move from a residue to the next one, the displacement is significantly slower. Did anyone notice this?

Do the spin test (bit late now to test it on 10.6.x I guess). Maybe we should keep a table in the Coot wiki with spin test results. Hmm..

Anyway, to speed up the position transition:

Edit -> Preferences -> Smooth Recentering -> Number of Steps -> 8.


Paul.


Reply via email to