Ed Pozharski wrote:
Would it be possible to reduce gaps in the sequence view window to, say,
no more than five letters in those cases when residue numbers on the
same chain jump up when going from protein to ligands/water?
Tricky.
I
understand on some level the rationale behind PDB standard of setting
chain ID for heteroatoms to whatever protein chain they "belong" to (yet
I miss the freedom of creating separate chains for ligands/waters and
numbering them to my liking). The unfortunate consequence if this
convention is that the residue list in the sequence view dialog becomes
very long (and ligands are hard to distinguish from waters as they form
long string of X's).
Perhaps non-water hetatoms can be in bold or something. Same for the Go
To Atom dialog (which is also messed up by wretched waters in the
protein chain).