I second Ed's expectations. I would like to see the pdb's I open with the --pdb option to have the bond width I prefer. Changing it from the Edit Menu is often one of my first actions when I open coot with command-line options.
Best, Miguel Le 6 avr. 2010 à 18:32, Ed Pozharski a écrit : > It appears that when loading model/map from command line (via --pdb and > --auto options) coot ignores the parameters defined in $HOME/.coot . > Mine has the (set-map-sampling-rate 2.5) setting for smoother maps, but > when I use the command line to load pdb/mtz files, the maps look more > like sampling rate 1.5 . > > Workaround is to open coot from command line, then close it, and then > reopen it and accept the dialog that loads from last coot state file. > Maps are smooth again. Of course, one can also load a script at the > start that fixes the sampling rate. I am just saying that the expected > behavior would be to import $HOME/.coot even if there are parameters in > the command line. Or is it a feature? > > -- > Coot verendus est > > -- > This message has been scanned for viruses and > dangerous content by MailScanner, and is > believed to be clean. > -- Miguel Architecture et Fonction des Macromolécules Biologiques (UMR6098) CNRS, Universités d'Aix-Marseille I & II Case 932, 163 Avenue de Luminy, 13288 Marseille cedex 9, France Tel: +33(0) 491 82 55 93 Fax: +33(0) 491 26 67 20 e-mail: miguel.ortiz-lombar...@afmb.univ-mrs.fr Web: http://www.pangea.org/mol/spip.php?rubrique2
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