Seth Harris wrote:
Hello,

After what felt like a reasonable amount of poking about, I can't find how to set the refinement map (yes, I tried 'set-refinement-map') although I did find that "guess-refinement-map" returns a good guess but doesn't seem to stop the "Oops! Must Select Map to fit to!" box from bothering me.

Wow. It now strikes me that this is a pain if you don't have a "Map" button - which I guess you don't. Which makes me think that you are using the gtk1 version. OK, time for that to die out.

(It could at least open the map selection dialog like what happens when you do Validate > Check/Delete waters without first specifying a map.) Seems a bit perverse to be able to determine I very likely want to refine against map 1, but not to actually set it for me. I am usually launching coot from a script-generated command, so my maps are always in the same order and I can reliably set the refinement map to imol #1, so I'd like to do that on startup.

In that case, I would have thought that (set-imol-refinement-map nnn) would do the trick (nnn is 1, in this case presumably).

(you can only do that if map number nnn exists at the time).

Is there any real danger in coot just going ahead with a guessed refinement map instead of the halting dialog? (Given the subsequent confirmation screen and the possibility to undo.) Or likely I am missing something everyone else has figured out?

Maybe most others are using gtk2 version.

Paul.

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