Dear Judit,
thank you for your reply!
...unfortunately, I don't seem to get it working; here's what I see at
the coot scheme scripting window :
coot> set-b-factor-bonds-scale-factor 1 100
#<primitive-procedure set-b-factor-bonds-scale-factor>
coot> 1
coot> 100
...and nothing happens with my molecule 1. Of course tried playing
around with the actual scale factor (intuitively , I thought it may be
acting as a direct multiplier...100 in that case should do the trick).
Tried changing the imol integer value as well, to modify other molecules
(already read or not)....no success.
What am I doing wrong?
alejandro
Judit Debreczeni wrote:
On 17 October 2011 21:24, Alejandro Buschiazzo <[email protected]> wrote:
Hi,
I wonder how should I go about changing the range of the B-factor ramp for
coloring atoms, at will, in order to have a full range of colors even when
my pseudo-B factors go from, say, 0 to 1 (default settings in this case
display all atoms blue of course...)
Might not be exactly the scaling you are after, but in most cases
this one does the job:
http://biop.ox.ac.uk/coot/doc/coot.html#set_002db_002dfactor_002dbonds_002dscale_002dfactor
--
Alejandro Buschiazzo, PhD
Research Scientist
Unit of Protein Crystallography
Institut Pasteur de Montevideo
Mataojo 2020
Montevideo 11400
URUGUAY
Phone: +598 25220910 int. 120
Fax: +598 25224185
http://www.pasteur.edu.uy/pxf
