For reading pdbs see: http://biop.ox.ac.uk/coot/doc/coot/Reading-coordinates.html
The underlying python function resides in coot_utils.py, feel free to modify for mtz (BTW same goes for scheme: coot-utils.scm)
B
On Wed, Oct 26, 2011 at 1:48 PM, Jerome Nwachukwu <[email protected] <mailto:[email protected]>> wrote: I am trying to write a short script to open multiple .pdb and .mtz files that have the same filename but are located in different paths, and adjust their map and bond settings. I noticed that the "multi-read-pdb" function does not deal well with common wildcards, for instance it would not let me use " * " to indicate all/every directory. Is there a better function or different method I can use to write such a script? Scheme or Python? If you're using Python, you can use the 'glob' module to handle wildcards: http://docs.python.org/library/glob.html#module-glob and feed the output of this to read_pdb, etc. -Nat
-- *************************************************** Dr. Bernhard Lohkamp Assistant Professor Div. Molecular Structural Biology Dept. of Medical Biochemistry and Biophysics (MBB) Karolinska Institutet S-17177 Stockholm Sweden phone: (+46) 08-52487651 fax: (+46) 08-327626 email: [email protected]
