all of out DT molecules in out protein/dna complex are missing the methyl group. Doing simple mutate to DT does not place the methyl on C5. the methyl is C7. It does place the hydrogens that should be on the methyl, but they are not connected to anything. You can test this by opening coot, placing DT anywhere and simple mutate it to DT. the methyl disappears. Is there a work around. the dictionary is correct.
thanks kas -- Kenneth A. Satyshur, M.S.,Ph.D. Senior Scientist University of Wisconsin Madison, Wisconsin 53706 608-215-5207
<<attachment: satyshur.vcf>>
