Hey, My coot does not start up anymore. Yesterday I done fink selfupdate and added: (define *probe-command* "probe") (define *reduce-command* "reduce") (set-find-hydrogen-torsion 1) (set-do-probe-dots-on-rotamers-and-chis 1) (set-do-probe-dots-post-refine 1) (set-rotamer-lowest-probability 0.5)
to use Probe Clashes. It worked fine yesterday, but today, when typing coot in my terminal then it starts to read up and then crashes suddenly (it even in short moment shows my previous map and coordinates and floating center) but then it crashes. Any idea to fix it? The last output in terminal is: INFO:: loading preferences file /Users/pulk/.coot-preferences/0-coot-history.scm (filter-fileselection-filenames-state) (get-active-map-drag-flag) (use-graphics-interface-state) (set-display-intro-string "Good Evening Pulk, Welcome to Coot. 0.7 (revision 4459) [with guile 1.8.8 embedded] [with python 2.7.3 embedded]") (set-filter-fileselection-filenames 0) (unset-sticky-sort-by-date) (set-colour-map-rotation-on-read-pdb 21.00) .... update_additional_representations() 0 (set-colour-map-rotation-on-read-pdb-c-only-flag 1) (set-density-size 25.00) (set-swap-difference-map-colours 0) Backtrace: In /Users/pulk/.coot-preferences/0-coot-history.scm: 11: 0* (set-colour-map-rotation-for-maps 14.0) /Users/pulk/.coot-preferences/0-coot-history.scm:11:1: In expression (set-colour-map-rotation-for-maps 14.0): /Users/pulk/.coot-preferences/0-coot-history.scm:11:1: Unbound variable: set-colour-map-rotation-for-maps Some deprecated features have been used. Set the environment variable GUILE_WARN_DEPRECATED to "detailed" and rerun the program to get more information. Set it to "no" to suppress this message. ObjectCache: Leaked 0001 refs to <P 1 Nuvw = ( 168, 288, 162)> ObjectCache: Leaked 0001 refs to <P 1> Best, Arto
