Hi Dan,
It sounds as though the symmetry info for your map 2 is off. You might
be able to fix it by running it through mapmask and re-specifying the
spacegroup.
Pete
Dan Lin wrote:
Dear all:
I have a question regarding maps and their display in coot.
I have 2 map files, both in CCP4 format for a P21 crystal structure:
#1 was calculated in FFT and covers one asymmetric unit
#2 was calculated in AVE and expanded within AVE to cover the asymmetric
unit
However, #1 is expanded perfectly in coot whereas #2 is missing half of the
map along the B axis.
When I open both maps in pymol they appear to have the same boundaries when
they aren't being expanded.
Is there something I need to do to #2 to get it to expand properly with the
symmetry operator?
Thanks,
Dan
