One can also use extensions > modelling > copy fragment to create a new
model based on the selection you want to superpose over. It gets a bit
clunky if you want multiple chains, which then require subsequent
merging (although maybe there's a clever selection syntax that can
accomplish that in one go). But it works well and you don't need to
keep typing stuff in if you want to perform multiple superpositions over
the same selection.
Alan
On 20/08/2013 15:59, Bernhard Lohkamp wrote:
As with so many things. This is already available, but currently only
via scripting:
http://www2.mrc-lmb.cam.ac.uk/Personal/pemsley/coot/doc/coot-faq.html#How-do-I-do-a-superposition-on-just-a-part-of-my-structure_003f
HTH,
B
Hi Paul, hi all,
let me add a request for a feature that I would find of great help in
comparing structures.
In the "Calculate --> SSM Superpose..." menu, I would find extremely
useful having a "residue range" just like in the "LSQ superpose..." menu.
That would help when comparing a couple of single chains, composed each
by two domains, and wants to superpose the first two domains, or the
second two.
It'll be great if you could implement it in future versions of the programs.
Thanks a lot,
ciao,
Sebastiano
--
*Sebastiano Pasqualato, PhD*
Crystallography Unit
Department of Experimental Oncology
European Institute of Oncology
IFOM-IEO Campus
via Adamello, 16
20139 - Milano
Italy
tel +39 02 9437 5167
fax +39 02 9437 5990
--
Alan Cheung
Gene Center
Ludwig-Maximilians-University
Feodor-Lynen-Str. 25
81377 Munich
Germany
Phone: +49-89-2180-76845
Fax: +49-89-2180-76999
E-mail: [email protected]
