On Sep 20, 2013, at 6:54 AM, Daniele de Sanctis <de.sanct...@gmail.com> wrote:

> I already tried everything I found on the web (Reinstall OS, Repair disk
> etc). Thanks in advance for your help
> 
> Daniele

Hi Daniele:

This is usually due to setting 

$DYLD_LIBRARY_PATH

which is best avoided.  I think the ccp4 shell initialization scripts do this 
still. 

If /Applications/coot.app  requires that, it is broken.

Before doing anything radical like reinstalling OS X, unsetting 
$DYLD_LIBRARY_PATH is at least worth a try, i.e.,

export DYLD_LIBRARY_PATH=""  

on bash or zsh, or 

unsetenv DYLD_LIBRARY_PATH

on tcsh should do it.

Also, you could try installing coot from here, as a control (or an alternative):

http://scottlab.ucsc.edu/~wgscott/xtal/wiki/index.php/Stand-Alone_Coot

Good luck.

Bill




William G. Scott
Professor
Department of Chemistry and Biochemistry
and The Center for the Molecular Biology of RNA
228 Sinsheimer Laboratories
University of California at Santa Cruz
Santa Cruz, California 95064
USA
 

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