Thank you for your answers, Jason and Alberto.

While it's true that the hypercard is a PCIe 3.0 device, I did not see the 
reason yet why it would not operate in a PCIe 2.0 slot with lower throughput. 
And I am not sure but - is Intel VROC required to use all four M.2 slots?

Anyways, I am happy to report that I "resolved" the issue partially by getting 
rid of the GPU that occupies two slots, replacing it by one that occupies just 
1 slot. Then I installed the USB3 controller card next to it, resulting in the 
following setup:

1. (MIO): empty
2. GPU
3. USB3 controller card
4. Hypercard
5. Empty

This way, I have graphics, USB 3.0 and two M.2 slots working. In addition, I 
noticed that the system (without usb3) takes around 7-8W less in idle than with 
the previous gpu installed. That's a bit surprising as the old gpu was 
advertised to use only ~5.5W total while idle (but I wondered while it gets so 
hot, I thought this was due to it being installed so close to CPU0's huge 
heatsink). As I don't need that much GPU power anyways, the swap had at least a 
nice (unexpected) side-effect for me.

However, the fact that I still can use only two M.2 cards is somewhat 
disappointing. Since there are also other vendors of comparable PCIe quad-M.2 
cards, I welcome any reports (both positive and negative) from people who tried 
different m.2 quad card models in a KGPE-D16.

Cheers, Daniel

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