Dear all,

I would like to draw your attention to BICEPS Marie Curie Sklodowska doctoral 
program, where we have 16 PhD positions across the following institutions 
across Europe:

German Center for Neurodegenerative Diseases (DZNE)
Bayer
metaSysX GmbH
University of Groningen
Aarhus University
University of Athens
University of Belgrade
Anacalypsis Therapeutics
Sulfateq B.V.
H. Lundbeck A/S
University of Oxford
Suleyman Demirel University
Semical Biosurgery

Several positions are focusing on bioinformatics and there are few also dealing 
with text. (e.g. Bayer one).

You can find positions here: 
https://euraxess.ec.europa.eu/jobs/search?f%5B0%5D=offer_type%3Ajob_offer&f%5B1%5D=keywords%3ABICEPS

Beyond neuroInflammation: new Concepts to Elucidate the peripheral immune 
system's vital role in Parkinson's disease

Decades of research into Parkinson's disease (PD) have fallen short in fully 
comprehending its mechanisms, leaving us without a cure. Current treatments 
merely alleviate symptoms temporarily, but are unable to impede the progression 
of the disease. Clearly, PD research has hit a wall, and new approaches are 
needed.

Recent discoveries of the involvement of the peripheral immune system in PD 
have sparked a groundbreaking proposition by BICEPS: PD must be considered a 
systemic disease with an immune response involving both brain and periphery. 
Thus, to revolutionize PD research, we must shift away from the neuro-centric 
approach of past decades and extend our focus to studying the immune system 
outside the brain. Furthermore, recent advancements, such as systems biology 
and artificial intelligence (AI)-driven data mining, diagnosis, and drug 
development, hold significant promise for advancing PD research. Therefore, 
BICEPS is uniting PD researchers, immunologists, and experts in AI and systems 
biology from leading European academic institutions, startup companies, and 
established pharmaceutical firms into a unique consortium. The primary 
objective is to train a new generation of PD researchers with interdisciplinary 
expertise in these fields.

This ambitious goal will be realized through an intensive training program that 
encompasses cutting-edge methodologies, encourages innovation, nurtures 
transferable skills, and provides immersive, hands-on research experiences. 
Thereby, the BICEPS network aims to shape the future of PD research by adopting 
a fresh perspective and expediting the development of diagnostics and therapies 
for PD, with a particular focus on the immune system.

Position in Bayer you can find here: https://euraxess.ec.europa.eu/jobs/286014

AI-driven data analysis, target identification and treatment development in PD

The project will be implemented at Bayer A.G. , under the supervision of Nikola 
Milošević.

Parkinson's disease (PD) is a progressive neurodegenerative disorder 
characterized by the loss of dopaminergic neurons in the substantia nigra, 
leading to motor symptoms such as tremors, rigidity, and bradykinesia. Recent 
research has highlighted the complex interplay between the nervous and immune 
systems in PD pathogenesis, emphasizing the need for integrated approaches to 
study neuro-immune interactions. This project aims to research best practices 
for, and develop novel collaborative no-code analytical platform specifically 
designed to explore and analyze neuro-immune interfaces in the context of PD 
and other neurodegenerative diseases.
The research will first focus on full integration and making easily accessible 
evidence from both user-provided data and publicly available biomedical 
databases and literature sources, adhering to FAIR (Findable, Accessible, 
Interoperable, and Reusable) principles. This will be followed by the 
representation of data in a knowledge graph, enabling sophisticated reasoning 
and hypothesis generation. Finally, the project will establish explainable 
AI-powered analytics, reasoning, hypothesis generation, and ranking pipelines 
about targets, pathways, and potential treatments.

The platform will incorporate various data types, including genetic, 
biochemical, and clinical information, to provide a comprehensive view of the 
neuro-immune landscape in PD. By leveraging advanced machine learning 
techniques and natural language processing, the system will be able to analyze 
and integrate results from multiple experimental studies, literature sources, 
and other relevant data repositories. This multidisciplinary approach combines 
techniques from computer science, bioinformatics, and neuroscience to create a 
powerful tool for PD research.

Expected outcomes of this project include determining the precise best 
practices for multi-layered analysis of targets involved in neurodegenerative 
diseases and developing a system that can help scientists collaborate, review, 
analyze, and integrate results from diverse sources.

Ultimately, this work could lead to the identification of novel therapeutic 
targets and potential treatments for PD by facilitating a deeper understanding 
of the complex neuro-immune interactions underlying the disease. The 
collaborative nature of the platform will foster interdisciplinary research and 
accelerate the pace of discovery in the field of neurodegenerative diseases.


Freundliche Grüße / Best regards,

Dr. Nikola Milosevic
Senior Computational Scientist | Bayer Science Fellow
////////////////////////
Bayer AG
Research & Development, Pharmaceuticals
R&D Data Sciences and AI, Scientific Insights Solutions
Building S105, 342
13342 Berlin, Germany
Tel:      +49 30 46817948
Mobile: +49 174 2169881
E-mail: [email protected]<mailto:[email protected]>
Web:    http://www.bayer.com
Datenschutzhinweise<https://www.bayer.de/de/datenschutzhinweise-fuer-ausgewaehlte-verarbeitungstaetigkeiten.aspx>
 // Data privacy 
information<https://www.bayer.com/en/data-privacy-information-for-specific-processing-activities.aspx>

/// Board of Management: Bill Anderson, Chairman | Wolfgang Nickl, Stefan 
Oelrich, Heike Prinz, Rodrigo Santos, Julio Triana
/// Chairman of the Supervisory Board: Norbert Winkeljohann
/// Registered office: Leverkusen | Amtsgericht Köln, HRB 48248




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