This distribution has been tested as part of the cpan-testers effort to test as many new uploads to CPAN as possible. See http://testers.cpan.org/
Please cc any replies to [email protected] to keep other test volunteers informed and to prevent any duplicate effort. -- Dear RVOSA, This is a computer-generated error report created automatically by CPANPLUS, version 0.055. Testers personal comments may appear at the end of this report. Thank you for uploading your work to CPAN. However, it appears that there were some problems testing your distribution. TEST RESULTS: Below is the error stack from stage 'make test': [MSG] [Tue Aug 2 15:32:29 2005] Trying to get 'file://ftp/pub/CPAN/authors/id/R/RV/RVOSA/Bio-Phylo-0.02.tar.gz' [MSG] [Tue Aug 2 15:32:30 2005] Trying to get 'file://ftp/pub/CPAN/authors/id/R/RV/RVOSA/CHECKSUMS' [MSG] [Tue Aug 2 15:32:31 2005] Checksum matches for 'Bio-Phylo-0.02.tar.gz' [MSG] [Tue Aug 2 15:32:51 2005] Extracted 'Bio-Phylo-0.02/' [MSG] [Tue Aug 2 15:32:51 2005] Extracted 'Bio-Phylo-0.02/bin/' [MSG] [Tue Aug 2 15:32:51 2005] Extracted 'Bio-Phylo-0.02/bin/age2bl.pl' [MSG] [Tue Aug 2 15:32:51 2005] Extracted 'Bio-Phylo-0.02/bin/bremer.pl' [MSG] [Tue Aug 2 15:32:51 2005] Extracted 'Bio-Phylo-0.02/bin/dnd2svg.pl' [MSG] [Tue Aug 2 15:32:51 2005] Extracted 'Bio-Phylo-0.02/bin/droptip.pl' [MSG] [Tue Aug 2 15:32:51 2005] Extracted 'Bio-Phylo-0.02/bin/LRmb.pl' [MSG] [Tue Aug 2 15:32:51 2005] Extracted 'Bio-Phylo-0.02/bin/postmb.pl' [MSG] [Tue Aug 2 15:32:51 2005] Extracted 'Bio-Phylo-0.02/Changes' [MSG] [Tue Aug 2 15:32:51 2005] Extracted 'Bio-Phylo-0.02/lib/' [MSG] [Tue Aug 2 15:32:51 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/' [MSG] [Tue Aug 2 15:32:51 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/' [MSG] [Tue Aug 2 15:32:51 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Exceptions.pm' [MSG] [Tue Aug 2 15:32:52 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Generator.pm' [MSG] [Tue Aug 2 15:32:52 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Listable.pm' [MSG] [Tue Aug 2 15:32:52 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Matrices/' [MSG] [Tue Aug 2 15:32:52 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Matrices/Datum.pm' [MSG] [Tue Aug 2 15:32:52 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Matrices/Matrix.pm' [MSG] [Tue Aug 2 15:32:52 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Matrices.pm' [MSG] [Tue Aug 2 15:32:52 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Parsers/' [MSG] [Tue Aug 2 15:32:52 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Parsers/Newick.pm' [MSG] [Tue Aug 2 15:32:52 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Parsers/Nexus.pm' [MSG] [Tue Aug 2 15:32:52 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Parsers/Table.pm' [MSG] [Tue Aug 2 15:32:52 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Parsers/Taxlist.pm' [MSG] [Tue Aug 2 15:32:53 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Parsers.pm' [MSG] [Tue Aug 2 15:32:53 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Taxa/' [MSG] [Tue Aug 2 15:32:53 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Taxa/Taxon.pm' [MSG] [Tue Aug 2 15:32:53 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Taxa.pm' [MSG] [Tue Aug 2 15:32:53 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Trees/' [MSG] [Tue Aug 2 15:32:53 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Trees/Node.pm' [MSG] [Tue Aug 2 15:32:53 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Trees/Tree.pm' [MSG] [Tue Aug 2 15:32:53 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Trees.pm' [MSG] [Tue Aug 2 15:32:53 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Unparsers/' [MSG] [Tue Aug 2 15:32:53 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Unparsers/Newick.pm' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Unparsers/Pagel.pm' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Unparsers/Svg.pm' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo/Unparsers.pm' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/lib/Bio/Phylo.pm' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/Makefile.PL' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/MANIFEST' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/META.yml' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/README' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/t/' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/t/00-load.t' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/t/01-phylo.t' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/t/02-newick.t' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/t/03-node.t' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/t/04-generator.t' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/t/05-trees.t' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/t/06-tree.t' [MSG] [Tue Aug 2 15:32:54 2005] Extracted 'Bio-Phylo-0.02/t/07-unparse.t' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/08-datum.t' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/09-matrix.t' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/10-matrices.t' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/11-taxon.t' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/12-taxa.t' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/13-listable.t' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/14-nexus.t' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/15-table.t' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/16-unparse.t' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/17-parse.t' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/18-taxlist.t' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/data.dat' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/pod-coverage.t' [MSG] [Tue Aug 2 15:32:55 2005] Extracted 'Bio-Phylo-0.02/t/pod.t' [MSG] [Tue Aug 2 15:32:56 2005] Extracted 'Bio-Phylo-0.02/t/taxa.dat' [MSG] [Tue Aug 2 15:32:56 2005] Extracted 'Bio-Phylo-0.02/t/testparse.dnd' [MSG] [Tue Aug 2 15:32:56 2005] Extracted 'Bio-Phylo-0.02/t/testparse.nex' [MSG] [Tue Aug 2 15:32:56 2005] Extracted 'Bio-Phylo-0.02/t/testparse_bad.nex' [MSG] [Tue Aug 2 15:32:56 2005] Extracted 'Bio-Phylo-0.02/t/testparse_bogus.nex' [MSG] [Tue Aug 2 15:32:56 2005] Extracted 'Bio-Phylo-0.02/t/testparse_taxa.nex' [MSG] [Tue Aug 2 15:32:56 2005] Extracted 'Bio-Phylo-0.02/t/testparse_taxa_bad.nex' [MSG] [Tue Aug 2 15:32:56 2005] Extracted 'Bio-Phylo-0.02/t/testparse_trees.nex' [MSG] [Tue Aug 2 15:32:56 2005] Extracted 'Bio-Phylo-0.02/t/testparse_trees1.nex' [MSG] [Tue Aug 2 15:32:56 2005] Extracted 'Bio::Phylo' to '/net/sunu991/disc1/home/.cpanplus/5.8.5/build/Bio-Phylo-0.02' [MSG] [Tue Aug 2 15:33:27 2005] Checking if your kit is complete... Looks good Writing Makefile for Bio::Phylo [MSG] [Tue Aug 2 15:35:24 2005] cp lib/Bio/Phylo/Listable.pm blib/lib/Bio/Phylo/Listable.pm cp lib/Bio/Phylo/Parsers/Nexus.pm blib/lib/Bio/Phylo/Parsers/Nexus.pm cp lib/Bio/Phylo/Parsers/Taxlist.pm blib/lib/Bio/Phylo/Parsers/Taxlist.pm cp lib/Bio/Phylo/Exceptions.pm blib/lib/Bio/Phylo/Exceptions.pm cp lib/Bio/Phylo/Matrices.pm blib/lib/Bio/Phylo/Matrices.pm cp lib/Bio/Phylo/Unparsers/Svg.pm blib/lib/Bio/Phylo/Unparsers/Svg.pm cp lib/Bio/Phylo/Trees.pm blib/lib/Bio/Phylo/Trees.pm cp lib/Bio/Phylo/Parsers.pm blib/lib/Bio/Phylo/Parsers.pm cp lib/Bio/Phylo/Generator.pm blib/lib/Bio/Phylo/Generator.pm cp lib/Bio/Phylo/Taxa/Taxon.pm blib/lib/Bio/Phylo/Taxa/Taxon.pm cp lib/Bio/Phylo/Unparsers/Newick.pm blib/lib/Bio/Phylo/Unparsers/Newick.pm cp lib/Bio/Phylo/Taxa.pm blib/lib/Bio/Phylo/Taxa.pm cp lib/Bio/Phylo/Trees/Tree.pm blib/lib/Bio/Phylo/Trees/Tree.pm cp lib/Bio/Phylo/Matrices/Datum.pm blib/lib/Bio/Phylo/Matrices/Datum.pm cp lib/Bio/Phylo.pm blib/lib/Bio/Phylo.pm cp lib/Bio/Phylo/Parsers/Newick.pm blib/lib/Bio/Phylo/Parsers/Newick.pm cp lib/Bio/Phylo/Unparsers/Pagel.pm blib/lib/Bio/Phylo/Unparsers/Pagel.pm cp lib/Bio/Phylo/Parsers/Table.pm blib/lib/Bio/Phylo/Parsers/Table.pm cp lib/Bio/Phylo/Matrices/Matrix.pm blib/lib/Bio/Phylo/Matrices/Matrix.pm cp lib/Bio/Phylo/Unparsers.pm blib/lib/Bio/Phylo/Unparsers.pm cp lib/Bio/Phylo/Trees/Node.pm blib/lib/Bio/Phylo/Trees/Node.pm Manifying blib/man3/Bio::Phylo::Listable.3 Manifying blib/man3/Bio::Phylo::Parsers::Taxlist.3 Manifying blib/man3/Bio::Phylo::Parsers::Nexus.3 Manifying blib/man3/Bio::Phylo::Exceptions.3 Manifying blib/man3/Bio::Phylo::Matrices.3 Manifying blib/man3/Bio::Phylo::Unparsers::Svg.3 Manifying blib/man3/Bio::Phylo::Trees.3 Manifying blib/man3/Bio::Phylo::Parsers.3 Manifying blib/man3/Bio::Phylo::Generator.3 Manifying blib/man3/Bio::Phylo::Taxa::Taxon.3 Manifying blib/man3/Bio::Phylo::Unparsers::Newick.3 Manifying blib/man3/Bio::Phylo::Trees::Tree.3 Manifying blib/man3/Bio::Phylo::Taxa.3 Manifying blib/man3/Bio::Phylo::Matrices::Datum.3 Manifying blib/man3/Bio::Phylo.3 Manifying blib/man3/Bio::Phylo::Parsers::Newick.3 Manifying blib/man3/Bio::Phylo::Unparsers::Pagel.3 Manifying blib/man3/Bio::Phylo::Unparsers.3 Manifying blib/man3/Bio::Phylo::Matrices::Matrix.3 Manifying blib/man3/Bio::Phylo::Parsers::Table.3 Manifying blib/man3/Bio::Phylo::Trees::Node.3 [ERROR] [Tue Aug 2 15:39:03 2005] MAKE TEST failed: No such file or directory PERL_DL_NONLAZY=1 /usr/local/perl-5.8.5/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/00-load.........# Testing Bio::Phylo 0.02_147, Perl 5.008005 ok t/01-phylo........ok t/02-newick.......ok t/03-node.........ok t/04-generator....ok t/05-trees........ok t/06-tree.........ok t/07-unparse......ok t/08-datum........ok t/09-matrix.......ok t/10-matrices.....ok t/11-taxon........ok t/12-taxa.........ok t/13-listable.....ok t/14-nexus........ # Failed test (t/14-nexus.t at line 24) # Looks like you failed 1 test of 10. dubious Test returned status 1 (wstat 256, 0x100) DIED. FAILED test 10 Failed 1/10 tests, 90.00% okay t/15-table........ok t/16-unparse......ok t/17-parse........ok t/18-taxlist......ok t/pod-coverage....ok t/pod.............ok Failed Test Stat Wstat Total Fail Failed List of Failed ------------------------------------------------------------------------------- t/14-nexus.t 1 256 10 1 10.00% 10 Failed 1/21 test scripts, 95.24% okay. 1/339 subtests failed, 99.71% okay. make: *** [test_dynamic] Error 29 PREREQUISITES: Here is a list of prerequisites you specified and versions we managed to load: Exception::Class 1.21 Math::Random 0.67 SVG 2.33 Test::More 0.60 ******************************** NOTE ******************************** The comments above are created mechanically, possibly without manual checking by the sender. As there are many people performing automatic tests on each upload to CPAN, it is likely that you will receive identical messages about the same problem. If you believe that the message is mistaken, please reply to the first one with correction and/or additional informations, and do not take it personally. We appreciate your patience. :) ********************************************************************** Additional comments: This report was machine-generated by CPAN::YACSmoke 0.03. -- Summary of my perl5 (revision 5 version 8 subversion 5) configuration: Platform: osname=solaris, osvers=2.9, archname=sun4-solaris-thread-multi uname='sunos sunu991 5.9 generic_112233-12 sun4u sparc sunw,ultra-5_10 solaris ' config_args='-de -Dusethreads -Dcc=gcc' hint=recommended, useposix=true, d_sigaction=define usethreads=define use5005threads=undef useithreads=define usemultiplicity=define useperlio=define d_sfio=undef uselargefiles=define usesocks=undef use64bitint=undef use64bitall=undef uselongdouble=undef usemymalloc=n, bincompat5005=undef Compiler: cc='gcc', ccflags ='-D_REENTRANT -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64', optimize='-O', cppflags='-D_REENTRANT -fno-strict-aliasing -pipe -I/usr/local/include' ccversion='', gccversion='3.3.2', gccosandvers='solaris2.8' intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=4321 d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16 ivtype='long', ivsize=4, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8 alignbytes=8, prototype=define Linker and Libraries: ld='gcc', ldflags =' -L/usr/local/lib ' libpth=/usr/local/lib /usr/lib /usr/ccs/lib libs=-lsocket -lnsl -ldl -lm -lpthread -lc perllibs=-lsocket -lnsl -ldl -lm -lpthread -lc libc=/lib/libc.so, so=so, useshrplib=false, libperl=libperl.a gnulibc_version='' Dynamic Linking: dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags=' ' cccdlflags='-fPIC', lddlflags='-G -L/usr/local/lib'
