This distribution has been tested as part of the cpan-testers effort to test as many new uploads to CPAN as possible. See http://testers.cpan.org/
Please cc any replies to [email protected] to keep other test volunteers informed and to prevent any duplicate effort. -- Dear ALEXMASS, This is a computer-generated error report created automatically by CPANPLUS, version 0.0562. Testers personal comments may appear at the end of this report. Thank you for uploading your work to CPAN. However, it appears that there were some problems testing your distribution. TEST RESULTS: Below is the error stack from stage 'make test': [CP_MSG] [Thu Dec 15 09:11:02 2005] Trying to get 'file://ftp/pub/CPAN/authors/id/A/AL/ALEXMASS/InSilicoSpectro-0.9.10.tar.gz' [CP_MSG] [Thu Dec 15 09:11:02 2005] Trying to get 'file://ftp/pub/CPAN/authors/id/A/AL/ALEXMASS/CHECKSUMS' [CP_MSG] [Thu Dec 15 09:11:03 2005] Checksum matches for 'InSilicoSpectro-0.9.10.tar.gz' [CP_MSG] [Thu Dec 15 09:11:25 2005] Extracted 'InSilicoSpectro-0.9.10/' [CP_MSG] [Thu Dec 15 09:11:25 2005] Extracted 'InSilicoSpectro-0.9.10/t/' [CP_MSG] [Thu Dec 15 09:11:25 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils.t' [CP_MSG] [Thu Dec 15 09:11:25 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/' [CP_MSG] [Thu Dec 15 09:11:25 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/XML/' [CP_MSG] [Thu Dec 15 09:11:25 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/XML/144.pidres.xml' [CP_MSG] [Thu Dec 15 09:11:25 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/XML/a.indexMaker.xml' [CP_MSG] [Thu Dec 15 09:11:25 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/XML/SaxIndexMaker.t' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/XML/testSaxIndexMaker.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/a.txt' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/a.zip' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/b.txt' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/c.txt' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/a.fasta.gz' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/a.indexMaker.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/testFiles.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/Utils/testIO.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/test1' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/test2' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/calHodges.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/paramPI.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/fitip.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/paramRT.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/fitkrok.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/406.dat' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/coef.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/expdata' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/Petritis.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/rtset.dtd' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/rtset.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/Hodges.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/krok.dat' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/fitguo.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/pidata.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/nnet.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/piset.dtd' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/piset.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/fitpet.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/data/calPetritis.xml' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testMSMSOutLegend.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testCalcDigest.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testMSMSOutLatex.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/meuh.pkl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testCalcDigestOOP.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/getIonIntensities.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testPeptide.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testAASequence.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testCalcPMFMatchOOP.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testCalcMatch.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testCalcMatchOOP.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testCleavEnzyme.pl' [CP_MSG] [Thu Dec 15 09:11:26 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testMSMSOutText.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/insilicodef.xml' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testModRes.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/ionStat.R' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testCalcFragOOP.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/examples_rt_pi' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testSequence.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testCalcVarpept.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testCalcFrag.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/listfiles' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testMSMSOutHtml.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testHodges.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testMSMSOutPlot.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testIsoelPoint.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testPetritis.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico/testCalcPMFMatch.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/Spectra.t' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/InSilico.t' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/Spectra/' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/Spectra/a.xml' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/Spectra/testPeakDescriptor.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/Spectra/testSpectra.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/Spectra/myo_ms2_1.04.xml' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/Spectra/testExpSpectrum.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/t/Spectra/166.dta' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/cgi/' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/cgi/digestorHome.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/cgi/showEnv.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/cgi/cgiComputeRT.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/cgi/fragmentatorHome.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/cgi/CGIUtils.pm' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/cgi/cgiInSilicoDef.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/cgi/cgiConvertSpectra.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/cgi/modifList.pl' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/cgi/DefEnv.pm' [CP_MSG] [Thu Dec 15 09:11:27 2005] Extracted 'InSilicoSpectro-0.9.10/cgi/fragmentator.pl' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/cgi/digestor.pl' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/Utils/' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/Utils/XML/' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/Utils/XML/SaxIndexMaker.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/Utils/Files.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/Utils/io.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/MSMSOutput.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/PMFMatch.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/TermIonSeries.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/Peptide.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/CleavEnzyme.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/IsoelPoint.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/RetentionTimer.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/MassCalculator.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/IonSeries.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/MSMSTheoSpectrum.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/RetentionTimer/' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/RetentionTimer/Petritis.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/RetentionTimer/Hodges.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/RetentionTimer/hodges_coef.xml' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/AASequence.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/ModRes.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/Sequence.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/ExpCalibrator.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/InSilico/InternIonSeries.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/config/' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/config/RESID.insilicodef.xml' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/config/insilicodef.xml' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/Spectra/' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/Spectra/MSSpectra.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/Spectra/ExpSpectrum.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/Spectra/PeakDescriptor.pm' [CP_MSG] [Thu Dec 15 09:11:28 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/Spectra/MSRun.pm' [CP_MSG] [Thu Dec 15 09:11:29 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/Spectra/PhenyxPeakDescriptor.pm' [CP_MSG] [Thu Dec 15 09:11:29 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/Spectra/MSMSCmpd.pm' [CP_MSG] [Thu Dec 15 09:11:29 2005] Extracted 'InSilicoSpectro-0.9.10/lib/InSilicoSpectro/Spectra/MSMSSpectra.pm' [CP_MSG] [Thu Dec 15 09:11:29 2005] Extracted 'InSilicoSpectro-0.9.10/README' [CP_MSG] [Thu Dec 15 09:11:29 2005] Extracted 'InSilicoSpectro-0.9.10/scripts/' [CP_MSG] [Thu Dec 15 09:11:29 2005] Extracted 'InSilicoSpectro-0.9.10/scripts/convertSpectra.pl' [CP_MSG] [Thu Dec 15 09:11:29 2005] Extracted 'InSilicoSpectro-0.9.10/scripts/importResid.pl' [CP_MSG] [Thu Dec 15 09:11:29 2005] Extracted 'InSilicoSpectro-0.9.10/scripts/indexXml.pl' [CP_MSG] [Thu Dec 15 09:11:29 2005] Extracted 'InSilicoSpectro-0.9.10/scripts/computePI.pl' [CP_MSG] [Thu Dec 15 09:11:29 2005] Extracted 'InSilicoSpectro-0.9.10/scripts/computeRT.pl' [CP_MSG] [Thu Dec 15 09:11:29 2005] Extracted 'InSilicoSpectro-0.9.10/Makefile.PL' [CP_MSG] [Thu Dec 15 09:11:29 2005] Extracted 'InSilicoSpectro-0.9.10/META.yml' [CP_MSG] [Thu Dec 15 09:11:30 2005] Extracted 'InSilicoSpectro' to '/net/sunu991/disc1/home/.cpanplus/5.8.5/build/InSilicoSpectro-0.9.10' [CP_MSG] [Thu Dec 15 09:11:37 2005] Writing Makefile for InSilicoSpectro [CP_MSG] [Thu Dec 15 09:12:03 2005] cp lib/InSilicoSpectro/InSilico/RetentionTimer/hodges_coef.xml blib/lib/InSilicoSpectro/InSilico/RetentionTimer/hodges_coef.xml cp lib/InSilicoSpectro/InSilico/RetentionTimer/Hodges.pm blib/lib/InSilicoSpectro/InSilico/RetentionTimer/Hodges.pm cp lib/InSilicoSpectro/InSilico/MSMSTheoSpectrum.pm blib/lib/InSilicoSpectro/InSilico/MSMSTheoSpectrum.pm cp lib/InSilicoSpectro/Spectra/MSMSSpectra.pm blib/lib/InSilicoSpectro/Spectra/MSMSSpectra.pm cp lib/InSilicoSpectro/InSilico/Sequence.pm blib/lib/InSilicoSpectro/InSilico/Sequence.pm cp lib/InSilicoSpectro/InSilico/InternIonSeries.pm blib/lib/InSilicoSpectro/InSilico/InternIonSeries.pm cp lib/InSilicoSpectro/InSilico/ModRes.pm blib/lib/InSilicoSpectro/InSilico/ModRes.pm cp lib/InSilicoSpectro/InSilico/TermIonSeries.pm blib/lib/InSilicoSpectro/InSilico/TermIonSeries.pm cp lib/InSilicoSpectro.pm blib/lib/InSilicoSpectro.pm cp lib/InSilicoSpectro/InSilico/RetentionTimer/Petritis.pm blib/lib/InSilicoSpectro/InSilico/RetentionTimer/Petritis.pm cp lib/InSilicoSpectro/InSilico/MSMSOutput.pm blib/lib/InSilicoSpectro/InSilico/MSMSOutput.pm cp lib/InSilicoSpectro/InSilico/ExpCalibrator.pm blib/lib/InSilicoSpectro/InSilico/ExpCalibrator.pm cp lib/InSilicoSpectro/Spectra/MSSpectra.pm blib/lib/InSilicoSpectro/Spectra/MSSpectra.pm cp lib/InSilicoSpectro/Spectra/PhenyxPeakDescriptor.pm blib/lib/InSilicoSpectro/Spectra/PhenyxPeakDescriptor.pm cp lib/InSilicoSpectro/Spectra/MSMSCmpd.pm blib/lib/InSilicoSpectro/Spectra/MSMSCmpd.pm cp lib/InSilicoSpectro/InSilico/CleavEnzyme.pm blib/lib/InSilicoSpectro/InSilico/CleavEnzyme.pm cp lib/InSilicoSpectro/InSilico/PMFMatch.pm blib/lib/InSilicoSpectro/InSilico/PMFMatch.pm cp lib/InSilicoSpectro/Utils/io.pm blib/lib/InSilicoSpectro/Utils/io.pm cp lib/InSilicoSpectro/InSilico/Peptide.pm blib/lib/InSilicoSpectro/InSilico/Peptide.pm cp lib/InSilicoSpectro/config/RESID.insilicodef.xml blib/lib/InSilicoSpectro/config/RESID.insilicodef.xml cp lib/InSilicoSpectro/Spectra/ExpSpectrum.pm blib/lib/InSilicoSpectro/Spectra/ExpSpectrum.pm cp lib/InSilicoSpectro/InSilico/AASequence.pm blib/lib/InSilicoSpectro/InSilico/AASequence.pm cp lib/InSilicoSpectro/config/insilicodef.xml blib/lib/InSilicoSpectro/config/insilicodef.xml cp lib/InSilicoSpectro/Spectra/MSRun.pm blib/lib/InSilicoSpectro/Spectra/MSRun.pm cp lib/InSilicoSpectro/InSilico/IonSeries.pm blib/lib/InSilicoSpectro/InSilico/IonSeries.pm cp lib/InSilicoSpectro/InSilico/MassCalculator.pm blib/lib/InSilicoSpectro/InSilico/MassCalculator.pm cp lib/InSilicoSpectro/Utils/Files.pm blib/lib/InSilicoSpectro/Utils/Files.pm cp lib/InSilicoSpectro/InSilico/RetentionTimer.pm blib/lib/InSilicoSpectro/InSilico/RetentionTimer.pm cp lib/InSilicoSpectro/InSilico/IsoelPoint.pm blib/lib/InSilicoSpectro/InSilico/IsoelPoint.pm cp lib/InSilicoSpectro/Utils/XML/SaxIndexMaker.pm blib/lib/InSilicoSpectro/Utils/XML/SaxIndexMaker.pm cp lib/InSilicoSpectro/Spectra/PeakDescriptor.pm blib/lib/InSilicoSpectro/Spectra/PeakDescriptor.pm cp scripts/convertSpectra.pl blib/script/convertSpectra.pl /usr/local/perl-5.8.5/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/convertSpectra.pl cp scripts/computeRT.pl blib/script/computeRT.pl /usr/local/perl-5.8.5/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/computeRT.pl cp scripts/importResid.pl blib/script/importResid.pl /usr/local/perl-5.8.5/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/importResid.pl cp scripts/indexXml.pl blib/script/indexXml.pl /usr/local/perl-5.8.5/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/indexXml.pl cp scripts/computePI.pl blib/script/computePI.pl /usr/local/perl-5.8.5/bin/perl "-MExtUtils::MY" -e "MY->fixin(shift)" blib/script/computePI.pl Manifying blib/man1/convertSpectra.pl.1 Manifying blib/man1/computeRT.pl.1 Manifying blib/man1/importResid.pl.1 Manifying blib/man1/indexXml.pl.1 Manifying blib/man1/computePI.pl.1 Manifying blib/man3/InSilicoSpectro::InSilico::RetentionTimer::Hodges.3 Manifying blib/man3/InSilicoSpectro::InSilico::MSMSTheoSpectrum.3 Manifying blib/man3/InSilicoSpectro::Spectra::MSMSSpectra.3 Manifying blib/man3/InSilicoSpectro::InSilico::Sequence.3 Manifying blib/man3/InSilicoSpectro::InSilico::InternIonSeries.3 Manifying blib/man3/InSilicoSpectro::InSilico::ModRes.3 Manifying blib/man3/InSilicoSpectro.3 Manifying blib/man3/InSilicoSpectro::InSilico::TermIonSeries.3 Manifying blib/man3/InSilicoSpectro::InSilico::RetentionTimer::Petritis.3 Manifying blib/man3/InSilicoSpectro::Spectra::MSSpectra.3 Manifying blib/man3/InSilicoSpectro::InSilico::ExpCalibrator.3 Manifying blib/man3/InSilicoSpectro::InSilico::MSMSOutput.3 Manifying blib/man3/InSilicoSpectro::Spectra::PhenyxPeakDescriptor.3 Manifying blib/man3/InSilicoSpectro::Spectra::MSMSCmpd.3 Manifying blib/man3/InSilicoSpectro::InSilico::CleavEnzyme.3 Manifying blib/man3/InSilicoSpectro::Utils::io.3 Manifying blib/man3/InSilicoSpectro::InSilico::PMFMatch.3 Manifying blib/man3/InSilicoSpectro::InSilico::Peptide.3 Manifying blib/man3/InSilicoSpectro::Spectra::ExpSpectrum.3 Manifying blib/man3/InSilicoSpectro::InSilico::AASequence.3 Manifying blib/man3/InSilicoSpectro::Spectra::MSRun.3 Manifying blib/man3/InSilicoSpectro::Utils::Files.3 Manifying blib/man3/InSilicoSpectro::InSilico::MassCalculator.3 Manifying blib/man3/InSilicoSpectro::InSilico::IonSeries.3 Manifying blib/man3/InSilicoSpectro::InSilico::IsoelPoint.3 Manifying blib/man3/InSilicoSpectro::InSilico::RetentionTimer.3 Manifying blib/man3/InSilicoSpectro::Utils::XML::SaxIndexMaker.3 Manifying blib/man3/InSilicoSpectro::Spectra::PeakDescriptor.3 [CP_ERROR] [Thu Dec 15 09:12:19 2005] MAKE TEST failed: No such file or directory PERL_DL_NONLAZY=1 /usr/local/perl-5.8.5/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/InSilico....sh: t/InSilico/testSequence.pl: cannot execute # Failed test in t/InSilico.t at line 7. # got: '256' # expected: '0' sh: t/InSilico/testAASequence.pl: cannot execute # Failed test in t/InSilico.t at line 9. # got: '256' # expected: '0' sh: t/InSilico/testAASequence.pl: cannot execute # Failed test in t/InSilico.t at line 10. # got: '256' # expected: '0' sh: t/InSilico/testPeptide.pl: cannot execute # Failed test in t/InSilico.t at line 12. # got: '256' # expected: '0' sh: t/InSilico/testPeptide.pl: cannot execute # Failed test in t/InSilico.t at line 13. # got: '256' # expected: '0' sh: t/InSilico/testPeptide.pl: cannot execute # Failed test in t/InSilico.t at line 14. # got: '256' # expected: '0' sh: t/InSilico/testCleavEnzyme.pl: cannot execute # Failed test in t/InSilico.t at line 16. # got: '256' # expected: '0' sh: t/InSilico/testModRes.pl: cannot execute # Failed test in t/InSilico.t at line 18. # got: '256' # expected: '0' sh: t/InSilico/testModRes.pl: cannot execute # Failed test in t/InSilico.t at line 19. # got: '256' # expected: '0' sh: t/InSilico/testCalcDigest.pl: cannot execute # Failed test in t/InSilico.t at line 21. # got: '256' # expected: '0' sh: t/InSilico/testCalcDigest.pl: cannot execute # Failed test in t/InSilico.t at line 22. # got: '256' # expected: '0' sh: t/InSilico/testCalcDigest.pl: cannot execute # Failed test in t/InSilico.t at line 23. # got: '256' # expected: '0' sh: t/InSilico/testCalcDigest.pl: cannot execute # Failed test in t/InSilico.t at line 24. # got: '256' # expected: '0' sh: t/InSilico/testCalcDigest.pl: cannot execute # Failed test in t/InSilico.t at line 25. # got: '256' # expected: '0' sh: t/InSilico/testCalcDigestOOP.pl: cannot execute # Failed test in t/InSilico.t at line 27. # got: '256' # expected: '0' sh: t/InSilico/testCalcDigestOOP.pl: cannot execute # Failed test in t/InSilico.t at line 28. # got: '256' # expected: '0' sh: t/InSilico/testCalcDigestOOP.pl: cannot execute # Failed test in t/InSilico.t at line 29. # got: '256' # expected: '0' sh: t/InSilico/testCalcDigestOOP.pl: cannot execute # Failed test in t/InSilico.t at line 30. # got: '256' # expected: '0' sh: t/InSilico/testCalcFrag.pl: cannot execute # Failed test in t/InSilico.t at line 32. # got: '256' # expected: '0' sh: t/InSilico/testCalcFrag.pl: cannot execute # Failed test in t/InSilico.t at line 33. # got: '256' # expected: '0' sh: t/InSilico/testCalcFragOOP.pl: cannot execute # Failed test in t/InSilico.t at line 35. # got: '256' # expected: '0' sh: t/InSilico/testCalcMatch.pl: cannot execute # Failed test in t/InSilico.t at line 37. # got: '256' # expected: '0' sh: t/InSilico/testCalcMatch.pl: cannot execute # Failed test in t/InSilico.t at line 38. # got: '256' # expected: '0' sh: t/InSilico/testCalcMatch.pl: cannot execute # Failed test in t/InSilico.t at line 39. # got: '256' # expected: '0' sh: t/InSilico/testCalcMatchOOP.pl: cannot execute # Failed test in t/InSilico.t at line 41. # got: '256' # expected: '0' sh: t/InSilico/testCalcMatchOOP.pl: cannot execute # Failed test in t/InSilico.t at line 42. # got: '256' # expected: '0' sh: t/InSilico/testCalcMatchOOP.pl: cannot execute # Failed test in t/InSilico.t at line 43. # got: '256' # expected: '0' sh: t/InSilico/testCalcPMFMatch.pl: cannot execute # Failed test in t/InSilico.t at line 45. # got: '256' # expected: '0' sh: t/InSilico/testCalcPMFMatch.pl: cannot execute # Failed test in t/InSilico.t at line 46. # got: '256' # expected: '0' sh: t/InSilico/testCalcPMFMatch.pl: cannot execute # Failed test in t/InSilico.t at line 47. # got: '256' # expected: '0' sh: t/InSilico/testCalcPMFMatchOOP.pl: cannot execute # Failed test in t/InSilico.t at line 49. # got: '256' # expected: '0' sh: t/InSilico/testCalcPMFMatchOOP.pl: cannot execute # Failed test in t/InSilico.t at line 50. # got: '256' # expected: '0' sh: t/InSilico/testCalcVarpept.pl: cannot execute # Failed test in t/InSilico.t at line 52. # got: '256' # expected: '0' sh: t/InSilico/testCalcVarpept.pl: cannot execute # Failed test in t/InSilico.t at line 53. # got: '256' # expected: '0' sh: t/InSilico/testCalcVarpept.pl: cannot execute # Failed test in t/InSilico.t at line 54. # got: '256' # expected: '0' sh: t/InSilico/testCalcVarpept.pl: cannot execute # Failed test in t/InSilico.t at line 55. # got: '256' # expected: '0' sh: t/InSilico/testMSMSOutText.pl: cannot execute # Failed test in t/InSilico.t at line 57. # got: '256' # expected: '0' sh: t/InSilico/testMSMSOutText.pl: cannot execute # Failed test in t/InSilico.t at line 58. # got: '256' # expected: '0' sh: t/InSilico/testMSMSOutHtml.pl: cannot execute # Failed test in t/InSilico.t at line 59. # got: '256' # expected: '0' sh: t/InSilico/testMSMSOutLatex.pl: cannot execute # Failed test in t/InSilico.t at line 60. # got: '256' # expected: '0' sh: t/InSilico/testMSMSOutPlot.pl: cannot execute # Failed test in t/InSilico.t at line 61. # got: '256' # expected: '0' sh: t/InSilico/testMSMSOutLegend.pl: cannot execute # Failed test in t/InSilico.t at line 62. # got: '256' # expected: '0' # Looks like you failed 42 tests of 44. dubious Test returned status 42 (wstat 10752, 0x2a00) DIED. FAILED tests 1-42 Failed 42/44 tests, 4.55% okay (less 2 skipped tests: 0 okay, 0.00%) t/Spectra.....sh: t/Spectra/testPeakDescriptor.pl: cannot execute # Failed test in t/Spectra.t at line 19. # got: '256' # expected: '0' sh: t/Spectra/testSpectra.pl: cannot execute # Failed test in t/Spectra.t at line 20. # got: '256' # expected: '0' # Looks like you failed 2 tests of 3. dubious Test returned status 2 (wstat 512, 0x200) DIED. FAILED tests 2-3 Failed 2/3 tests, 33.33% okay t/Utils.......sh: t/Utils/testIO.pl: cannot execute # Failed test in t/Utils.t at line 6. # got: '256' # expected: '0' sh: t/Utils/testIO.pl: cannot execute # Failed test in t/Utils.t at line 7. # got: '256' # expected: '0' # Looks like you failed 2 tests of 2. dubious Test returned status 2 (wstat 512, 0x200) DIED. FAILED tests 1-2 Failed 2/2 tests, 0.00% okay Failed Test Stat Wstat Total Fail Failed List of Failed ------------------------------------------------------------------------------- t/InSilico.t 42 10752 44 42 95.45% 1-42 t/Spectra.t 2 512 3 2 66.67% 2-3 t/Utils.t 2 512 2 2 100.00% 1-2 2 subtests skipped. Failed 3/3 test scripts, 0.00% okay. 46/49 subtests failed, 6.12% okay. make: *** [test_dynamic] Error 2 PREREQUISITES: Here is a list of prerequisites you specified and versions we managed to load: Archive::Zip 1.16 Compress::Zlib 1.41 Digest::MD5 2.36 File::Find::Rule 0.28 File::Temp 0.16 GD 2.30 GD::Graph 1.43 GD::Text 0.86 Getopt::Long 2.34 MIME::Base64 3.07 XML::Parser 2.34 XML::Twig 3.22 ******************************** NOTE ******************************** The comments above are created mechanically, possibly without manual checking by the sender. As there are many people performing automatic tests on each upload to CPAN, it is likely that you will receive identical messages about the same problem. If you believe that the message is mistaken, please reply to the first one with correction and/or additional informations, and do not take it personally. We appreciate your patience. :) ********************************************************************** Additional comments: This report was machine-generated by CPAN::YACSmoke 0.03. -- Summary of my perl5 (revision 5 version 8 subversion 5) configuration: Platform: osname=solaris, osvers=2.9, archname=sun4-solaris-thread-multi uname='sunos sunu991 5.9 generic_112233-12 sun4u sparc sunw,ultra-5_10 solaris ' config_args='-de -Dusethreads -Dcc=gcc' hint=recommended, useposix=true, d_sigaction=define usethreads=define use5005threads=undef useithreads=define usemultiplicity=define useperlio=define d_sfio=undef uselargefiles=define usesocks=undef use64bitint=undef use64bitall=undef uselongdouble=undef usemymalloc=n, bincompat5005=undef Compiler: cc='gcc', ccflags ='-D_REENTRANT -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64', optimize='-O', cppflags='-D_REENTRANT -fno-strict-aliasing -pipe -I/usr/local/include' ccversion='', gccversion='3.3.2', gccosandvers='solaris2.8' intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=4321 d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16 ivtype='long', ivsize=4, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8 alignbytes=8, prototype=define Linker and Libraries: ld='gcc', ldflags =' -L/usr/local/lib ' libpth=/usr/local/lib /usr/lib /usr/ccs/lib libs=-lsocket -lnsl -ldl -lm -lpthread -lc perllibs=-lsocket -lnsl -ldl -lm -lpthread -lc libc=/lib/libc.so, so=so, useshrplib=false, libperl=libperl.a gnulibc_version='' Dynamic Linking: dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags=' ' cccdlflags='-fPIC', lddlflags='-G -L/usr/local/lib'
