This distribution has been tested as part of the cpan-testers effort to test as many new uploads to CPAN as possible. See http://testers.cpan.org/
Please cc any replies to [email protected] to keep other test volunteers informed and to prevent any duplicate effort. -- Dear SHERLOCK, This is a computer-generated error report created automatically by CPANPLUS, version 0.076. Testers personal comments may appear at the end of this report. Thank you for uploading your work to CPAN. However, it appears that there were some problems testing your distribution. TEST RESULTS: Below is the error stack from stage 'make test': [MSG] [Fri Mar 23 10:00:26 2007] Trying to get 'ftp://ftp.cpan.org/pub/CPAN/authors/id/S/SH/SHERLOCK/GO-TermFinder-0.8.tar.gz' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/Changes' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/docs/' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/docs/GO-TermFinder.doc' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/examples/' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/examples/analyze.pl' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/examples/ancestors.pl' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/examples/batchGOView.pl' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/examples/children.pl' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/examples/example_goView.gif' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/examples/examples.html' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/examples/genes.txt' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/examples/genes2.txt' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/examples/GoView.conf' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/examples/termFinderClient.pl' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/AnnotatedGene.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/Annotation.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/AnnotationProvider/' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/AnnotationProvider/AnnotationParser.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/AnnotationProvider.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/Node.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/OntologyProvider/' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/OntologyProvider/OboParser.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/OntologyProvider/OntologyParser.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/OntologyProvider.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/Reference.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/TermFinder/' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/TermFinder/Native.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/TermFinder.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/TermFinderReport/' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/TermFinderReport/Html.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/TermFinderReport/Text.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/Utils/' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/Utils/File.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/Utils/General.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/View/' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/View/GD.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/lib/GO/View.pm' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/LICENSE' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/Makefile.PL' [MSG] [Fri Mar 23 10:00:34 2007] Extracted 'GO-TermFinder-0.8/MANIFEST' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/META.yml' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/native/' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/native/Distributions.cxx' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/native/Distributions.hxx' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/native/Makefile.PL' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/native/Native.i' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/native/Native_wrap.cxx' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/README' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/t/' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/t/gene_association.sgd' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/t/gene_association.test' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/t/gene_ontology_edit.obo' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/t/GO-AnnotatedGene.t' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/t/GO-AnnotationProvider-AnnotationParser.t' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/t/GO-Node.t' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/t/GO-OntologyProvider-OboParser.t' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/t/GO-TermFinder-Native.t' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/t/GO-TermFinder-Obo.t' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/t/pod-coverage.t' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/t/pod.t' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/t/strict.t' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO-TermFinder-0.8/VERSION' [MSG] [Fri Mar 23 10:00:35 2007] Extracted 'GO::TermFinder' to '/net/sunu991/disc1/home/.cpanplus/5.8.8/build/GO-TermFinder-0.8' [MSG] [Fri Mar 23 10:00:45 2007] Checking if your kit is complete... Looks good Can't cd to (/etc/inet/) secret: Permission denied at ./Makefile.PL line 53 Can't cd to (/etc/openwin/) server: Permission denied at ./Makefile.PL line 53 Can't cd to (/etc/sfw/) private: Permission denied at ./Makefile.PL line 53 Writing Makefile for GO::TermFinder::Native Writing Makefile for GO-TermFinder [MSG] [Fri Mar 23 10:00:45 2007] DEFAULT 'filter_prereqs' HANDLER RETURNING 'sub return value' [MSG] [Fri Mar 23 10:01:23 2007] cp lib/GO/TermFinder/Native.pm blib/lib/GO/TermFinder/Native.pm cp lib/GO/Node.pm blib/lib/GO/Node.pm cp lib/GO/TermFinderReport/Html.pm blib/lib/GO/TermFinderReport/Html.pm cp lib/GO/OntologyProvider.pm blib/lib/GO/OntologyProvider.pm cp lib/GO/OntologyProvider/OboParser.pm blib/lib/GO/OntologyProvider/OboParser.pm cp lib/GO/OntologyProvider/OntologyParser.pm blib/lib/GO/OntologyProvider/OntologyParser.pm cp lib/GO/Annotation.pm blib/lib/GO/Annotation.pm cp lib/GO/AnnotationProvider/AnnotationParser.pm blib/lib/GO/AnnotationProvider/AnnotationParser.pm cp lib/GO/TermFinder.pm blib/lib/GO/TermFinder.pm cp lib/GO/Utils/General.pm blib/lib/GO/Utils/General.pm cp lib/GO/AnnotatedGene.pm blib/lib/GO/AnnotatedGene.pm cp lib/GO/Utils/File.pm blib/lib/GO/Utils/File.pm cp lib/GO/Reference.pm blib/lib/GO/Reference.pm cp lib/GO/AnnotationProvider.pm blib/lib/GO/AnnotationProvider.pm cp lib/GO/View.pm blib/lib/GO/View.pm cp lib/GO/TermFinderReport/Text.pm blib/lib/GO/TermFinderReport/Text.pm cp lib/GO/View/GD.pm blib/lib/GO/View/GD.pm make[1]: Entering directory `/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/native' g++ -c -D_REENTRANT -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/test/include -I/usr/local/ssl/include -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -O -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/CORE" Distributions.cxx cc1plus: warning: command line option "-Wdeclaration-after-statement" is valid for C/ObjC but not for C++ g++ -c -D_REENTRANT -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/test/include -I/usr/local/ssl/include -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -O -DVERSION=\"\" -DXS_VERSION=\"\" -fPIC "-I/usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/CORE" Native_wrap.cxx cc1plus: warning: command line option "-Wdeclaration-after-statement" is valid for C/ObjC but not for C++ Running Mkbootstrap for GO::TermFinder::Native () chmod 644 Native.bs rm -f ../blib/arch/auto/GO/TermFinder/Native/Native. LD_RUN_PATH="/usr/local/test/lib" g++ -G -L/usr/local/test/lib -L/usr/local/ssl/lib -L/usr/local/lib Distributions.o Native_wrap.o -o ../blib/arch/auto/GO/TermFinder/Native/Native. \ -lm -lstdc++ \ chmod 755 ../blib/arch/auto/GO/TermFinder/Native/Native. cp Native.bs ../blib/arch/auto/GO/TermFinder/Native/Native.bs chmod 644 ../blib/arch/auto/GO/TermFinder/Native/Native.bs make[1]: Leaving directory `/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/native' Manifying blib/man3/GO::AnnotatedGene.3 Manifying blib/man3/GO::Utils::File.3 Manifying blib/man3/GO::Reference.3 Manifying blib/man3/GO::Node.3 Manifying blib/man3/GO::TermFinderReport::Html.3 Manifying blib/man3/GO::OntologyProvider.3 Manifying blib/man3/GO::OntologyProvider::OboParser.3 Manifying blib/man3/GO::Annotation.3 Manifying blib/man3/GO::OntologyProvider::OntologyParser.3 Manifying blib/man3/GO::TermFinder.3 Manifying blib/man3/GO::AnnotationProvider::AnnotationParser.3 Manifying blib/man3/GO::AnnotationProvider.3 Manifying blib/man3/GO::Utils::General.3 Manifying blib/man3/GO::View.3 Manifying blib/man3/GO::TermFinderReport::Text.3 Manifying blib/man3/GO::View::GD.3 [ERROR] [Fri Mar 23 10:06:59 2007] MAKE TEST failed: Illegal seek make[1]: Entering directory `/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/native' make[1]: Leaving directory `/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/native' PERL_DL_NONLAZY=1 /usr/local/perl-5.8.8/bin/perl "-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t t/GO-AnnotatedGene..........................ok t/GO-AnnotationProvider-AnnotationParser....ok t/GO-Node...................................ok t/GO-OntologyProvider-OboParser.............ok t/GO-TermFinder-Native......................Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 Compilation failed in require at t/GO-TermFinder-Native.t line 18. BEGIN failed--compilation aborted at t/GO-TermFinder-Native.t line 18 (#1) (F) The module you tried to load failed to load a dynamic extension. This may either mean that you upgraded your version of perl to one that is incompatible with your old dynamic extensions (which is known to happen between major versions of perl), or (more likely) that your dynamic extension was built against an older version of the library that is installed on your system. You may need to rebuild your old dynamic extensions. Uncaught exception from user code: Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 Compilation failed in require at t/GO-TermFinder-Native.t line 18. BEGIN failed--compilation aborted at t/GO-TermFinder-Native.t line 18. at t/GO-TermFinder-Native.t line 18 dubious Test returned status 2 (wstat 512, 0x200) DIED. FAILED tests 1-15 Failed 15/15 tests, 0.00% okay t/GO-TermFinder-Obo.........................Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 Compilation failed in require at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. BEGIN failed--compilation aborted at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. Compilation failed in require at t/GO-TermFinder-Obo.t line 18. BEGIN failed--compilation aborted at t/GO-TermFinder-Obo.t line 18 (#1) (F) The module you tried to load failed to load a dynamic extension. This may either mean that you upgraded your version of perl to one that is incompatible with your old dynamic extensions (which is known to happen between major versions of perl), or (more likely) that your dynamic extension was built against an older version of the library that is installed on your system. You may need to rebuild your old dynamic extensions. Uncaught exception from user code: Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 Compilation failed in require at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. BEGIN failed--compilation aborted at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. Compilation failed in require at t/GO-TermFinder-Obo.t line 18. BEGIN failed--compilation aborted at t/GO-TermFinder-Obo.t line 18. at t/GO-TermFinder-Obo.t line 18 dubious Test returned status 2 (wstat 512, 0x200) DIED. FAILED tests 1-7991 Failed 7991/7991 tests, 0.00% okay t/pod-coverage..............................ok t/pod.......................................ok t/strict.................................... # Failed test 'Syntax check ./blib/lib/GO/TermFinder.pm' # at t/strict.t line 35. # Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. # at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 # Compilation failed in require at ./blib/lib/GO/TermFinder.pm line 99. # BEGIN failed--compilation aborted at ./blib/lib/GO/TermFinder.pm line 99 (#1) # (F) The module you tried to load failed to load a dynamic extension. This # may either mean that you upgraded your version of perl to one that is # incompatible with your old dynamic extensions (which is known to happen # between major versions of perl), or (more likely) that your dynamic # extension was built against an older version of the library that is # installed on your system. You may need to rebuild your old dynamic # extensions. # # Uncaught exception from user code: # Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. # at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 # Compilation failed in require at ./blib/lib/GO/TermFinder.pm line 99. # BEGIN failed--compilation aborted at ./blib/lib/GO/TermFinder.pm line 99. # at ./blib/lib/GO/TermFinder.pm line 99 # Failed test 'Syntax check ./examples/analyze.pl' # at t/strict.t line 35. # Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. # at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 # Compilation failed in require at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # BEGIN failed--compilation aborted at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # Compilation failed in require at ./examples/analyze.pl line 38. # BEGIN failed--compilation aborted at ./examples/analyze.pl line 38 (#1) # (F) The module you tried to load failed to load a dynamic extension. This # may either mean that you upgraded your version of perl to one that is # incompatible with your old dynamic extensions (which is known to happen # between major versions of perl), or (more likely) that your dynamic # extension was built against an older version of the library that is # installed on your system. You may need to rebuild your old dynamic # extensions. # # Uncaught exception from user code: # Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. # at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 # Compilation failed in require at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # BEGIN failed--compilation aborted at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # Compilation failed in require at ./examples/analyze.pl line 38. # BEGIN failed--compilation aborted at ./examples/analyze.pl line 38. # at ./examples/analyze.pl line 38 # Failed test 'Syntax check ./examples/batchGOView.pl' # at t/strict.t line 35. # Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. # at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 # Compilation failed in require at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # BEGIN failed--compilation aborted at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # Compilation failed in require at ./examples/batchGOView.pl line 70. # BEGIN failed--compilation aborted at ./examples/batchGOView.pl line 70 (#1) # (F) The module you tried to load failed to load a dynamic extension. This # may either mean that you upgraded your version of perl to one that is # incompatible with your old dynamic extensions (which is known to happen # between major versions of perl), or (more likely) that your dynamic # extension was built against an older version of the library that is # installed on your system. You may need to rebuild your old dynamic # extensions. # # Uncaught exception from user code: # Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. # at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 # Compilation failed in require at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # BEGIN failed--compilation aborted at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # Compilation failed in require at ./examples/batchGOView.pl line 70. # BEGIN failed--compilation aborted at ./examples/batchGOView.pl line 70. # at ./examples/batchGOView.pl line 70 # Failed test 'Syntax check ./examples/termFinderClient.pl' # at t/strict.t line 35. # Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. # at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 # Compilation failed in require at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # BEGIN failed--compilation aborted at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # Compilation failed in require at ./examples/termFinderClient.pl line 33. # BEGIN failed--compilation aborted at ./examples/termFinderClient.pl line 33 (#1) # (F) The module you tried to load failed to load a dynamic extension. This # may either mean that you upgraded your version of perl to one that is # incompatible with your old dynamic extensions (which is known to happen # between major versions of perl), or (more likely) that your dynamic # extension was built against an older version of the library that is # installed on your system. You may need to rebuild your old dynamic # extensions. # # Uncaught exception from user code: # Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. # at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 # Compilation failed in require at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # BEGIN failed--compilation aborted at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # Compilation failed in require at ./examples/termFinderClient.pl line 33. # BEGIN failed--compilation aborted at ./examples/termFinderClient.pl line 33. # at ./examples/termFinderClient.pl line 33 # Failed test 'Syntax check ./t/GO-TermFinder-Native.t' # at t/strict.t line 35. # 1..15 # # Running under perl version 5.008008 for solaris # # Current time local: Fri Mar 23 10:06:45 2007 # # Current time GMT: Fri Mar 23 09:06:45 2007 # # Using Test.pm version 1.25 # Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. # at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 # Compilation failed in require at ./t/GO-TermFinder-Native.t line 18. # BEGIN failed--compilation aborted at ./t/GO-TermFinder-Native.t line 18 (#1) # (F) The module you tried to load failed to load a dynamic extension. This # may either mean that you upgraded your version of perl to one that is # incompatible with your old dynamic extensions (which is known to happen # between major versions of perl), or (more likely) that your dynamic # extension was built against an older version of the library that is # installed on your system. You may need to rebuild your old dynamic # extensions. # # Uncaught exception from user code: # Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. # at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 # Compilation failed in require at ./t/GO-TermFinder-Native.t line 18. # BEGIN failed--compilation aborted at ./t/GO-TermFinder-Native.t line 18. # at ./t/GO-TermFinder-Native.t line 18 # Failed test 'Syntax check ./t/GO-TermFinder-Obo.t' # at t/strict.t line 35. # 1..7991 # # Running under perl version 5.008008 for solaris # # Current time local: Fri Mar 23 10:06:47 2007 # # Current time GMT: Fri Mar 23 09:06:47 2007 # # Using Test.pm version 1.25 # Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. # at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 # Compilation failed in require at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # BEGIN failed--compilation aborted at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # Compilation failed in require at ./t/GO-TermFinder-Obo.t line 18. # BEGIN failed--compilation aborted at ./t/GO-TermFinder-Obo.t line 18 (#1) # (F) The module you tried to load failed to load a dynamic extension. This # may either mean that you upgraded your version of perl to one that is # incompatible with your old dynamic extensions (which is known to happen # between major versions of perl), or (more likely) that your dynamic # extension was built against an older version of the library that is # installed on your system. You may need to rebuild your old dynamic # extensions. # # Uncaught exception from user code: # Can't load '/net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.' for module GO::TermFinder::Native: ld.so.1: perl: fatal: relocation error: file /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/arch/auto/GO/TermFinder/Native/Native.: symbol _ZSt29_Rb_tree_insert_and_rebalancebPSt18_Rb_tree_node_baseS0_RS_: referenced symbol not found at /usr/local/perl-5.8.8/lib/5.8.8/sun4-solaris-thread-multi/DynaLoader.pm line 230. # at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder/Native.pm line 8 # Compilation failed in require at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # BEGIN failed--compilation aborted at /net/sunu991/disc1/.cpanplus/5.8.8/build/GO-TermFinder-0.8/blib/lib/GO/TermFinder.pm line 99. # Compilation failed in require at ./t/GO-TermFinder-Obo.t line 18. # BEGIN failed--compilation aborted at ./t/GO-TermFinder-Obo.t line 18. # at ./t/GO-TermFinder-Obo.t line 18 dubious Test returned status 6 (wstat 1536, 0x600) DIED. FAILED tests 31, 53, 59, 65, 83, 86 Failed 6/97 tests, 93.81% okay # Looks like you failed 6 tests of 97. Failed Test Stat Wstat Total Fail List of Failed ------------------------------------------------------------------------------- t/GO-TermFinder-Native.t 2 512 15 30 1-15 t/GO-TermFinder-Obo.t 2 512 7991 1598 1-7991 t/strict.t 6 1536 97 6 31 53 59 65 83 86 Failed 3/9 test scripts. 8012/8265 subtests failed. Files=9, Tests=8265, 331 wallclock secs (190.99 cusr + 26.29 csys = 217.28 CPU) Failed 3/9 test programs. 8012/8265 subtests failed. make: *** [test_dynamic] Error 6 PREREQUISITES: Here is a list of prerequisites you specified and versions we managed to load: CGI 3.27 GD 2.35 GraphViz 2.02 Storable 2.15 Test::More 0.70 ******************************** NOTE ******************************** The comments above are created mechanically, possibly without manual checking by the sender. As there are many people performing automatic tests on each upload to CPAN, it is likely that you will receive identical messages about the same problem. If you believe that the message is mistaken, please reply to the first one with correction and/or additional informations, and do not take it personally. We appreciate your patience. :) ********************************************************************** Additional comments: This report was machine-generated by CPAN::YACSmoke 0.03. -- Summary of my perl5 (revision 5 version 8 subversion 8) configuration: Platform: osname=solaris, osvers=2.9, archname=sun4-solaris-thread-multi uname='sunos sunu991 5.9 generic_118558-14 sun4u sparc sunw,ultra-5_10 solaris ' config_args='-Dcc=gcc -Dprefix=/usr/local/perl-5.8.8 -Dinstallusrbinperl' hint=recommended, useposix=true, d_sigaction=define usethreads=define use5005threads=undef useithreads=define usemultiplicity=define useperlio=define d_sfio=undef uselargefiles=define usesocks=undef use64bitint=undef use64bitall=undef uselongdouble=undef usemymalloc=n, bincompat5005=undef Compiler: cc='gcc', ccflags ='-D_REENTRANT -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/test/include -I/usr/local/ssl/include -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64', optimize='-O', cppflags='-D_REENTRANT -fno-strict-aliasing -pipe -Wdeclaration-after-statement -I/usr/local/test/include -I/usr/local/ssl/include -I/usr/local/include' ccversion='', gccversion='3.4.1', gccosandvers='solaris2.9' intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=4321 d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16 ivtype='long', ivsize=4, nvtype='double', nvsize=8, Off_t='off_t', lseeksize=8 alignbytes=8, prototype=define Linker and Libraries: ld='gcc', ldflags ='-L/usr/local/test/lib -L/usr/local/ssl/lib -L/usr/local/lib ' libpth=/usr/local/test/lib /usr/local/ssl/lib /usr/local/lib /usr/lib /usr/ccs/lib libs=-lsocket -lnsl -lgdbm -ldb -ldl -lm -lpthread -lc perllibs=-lsocket -lnsl -ldl -lm -lpthread -lc libc=/lib/libc.so, so=so, useshrplib=false, libperl=libperl.a gnulibc_version='' Dynamic Linking: dlsrc=dl_dlopen.xs, dlext=, d_dlsymun=undef, ccdlflags=' ' cccdlflags='-fPIC', lddlflags='-G -L/usr/local/test/lib -L/usr/local/ssl/lib -L/usr/local/lib'
